RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
RTN4-215ENST00000491592 FOXD3Q9UJU5 478 aaPredicted RBP7.02□□□□□ -1.29
RTN4-215ENST00000491592 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
RTN4-215ENST00000491592 ERCC3P19447 782 aa7.01□□□□□ -1.29
RTN4-215ENST00000491592 ADH6P28332 368 aa7.01□□□□□ -1.29
RTN4-215ENST00000491592 PCBP4P57723 403 aaKnown RBP7.01□□□□□ -1.29
RTN4-215ENST00000491592 NIF3L1Q9GZT8 377 aa7.01□□□□□ -1.29
RTN4-215ENST00000491592 MMP20O60882 483 aa7□□□□□ -1.29
RTN4-215ENST00000491592 PHACTR2O75167 634 aa7□□□□□ -1.29
RTN4-215ENST00000491592 SIN3BO75182 1162 aa7□□□□□ -1.29
RTN4-215ENST00000491592 P4HBP07237 508 aaKnown RBP7□□□□□ -1.29
RTN4-215ENST00000491592 AMPD1P23109 780 aa7□□□□□ -1.29
RTN4-215ENST00000491592 ORC1Q13415 861 aa7□□□□□ -1.29
RTN4-215ENST00000491592 DSC3Q14574 896 aa7□□□□□ -1.29
RTN4-215ENST00000491592 SLCO4C1Q6ZQN7 724 aa7□□□□□ -1.29
RTN4-215ENST00000491592 C1orf229Q6ZS94 237 aaPredicted RBP7□□□□□ -1.29
RTN4-215ENST00000491592 DHX32Q7L7V1 743 aaKnown RBP7□□□□□ -1.29
RTN4-215ENST00000491592 OR13H1Q8NG92 308 aa7□□□□□ -1.29
RTN4-215ENST00000491592 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
RTN4-215ENST00000491592 NEURL1BA8MQ27 555 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 HOXD8P13378 290 aaPredicted RBP6.99□□□□□ -1.29
RTN4-215ENST00000491592 SOX18P35713 384 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 TBC1D8BQ0IIM8 1120 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 TTC39BQ5VTQ0 682 aaPredicted RBP6.99□□□□□ -1.29
RTN4-215ENST00000491592 FCHSD1Q86WN1 690 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 CHRDQ9H2X0 955 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 GGA1Q9UJY5 639 aa6.99□□□□□ -1.29
RTN4-215ENST00000491592 NEFLP07196 543 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 PSAPP07602 524 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 COL8A1P27658 744 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 MAPK8P45983 427 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 NRLP54845 237 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 PLAURQ03405 335 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 COL19A1Q14993 1142 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 C1orf127Q8N9H9 656 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 TNFRSF25Q93038 417 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 TLR7Q9NYK1 1049 aaKnown RBP6.98□□□□□ -1.29
RTN4-215ENST00000491592 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 KLF15Q9UIH9 416 aa6.98□□□□□ -1.29
RTN4-215ENST00000491592 PNMA6FA0A0J9YX94 578 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 EIF1AYO14602 144 aaKnown RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 GNB5O14775 395 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 CPNE3O75131 537 aaKnown RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 CYP2E1P05181 493 aaPredicted RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 ADH7P40394 386 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 GPLD1P80108 840 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 ENOX2Q16206 610 aaKnown RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 LINC00114Q6XXX2 140 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 RGS22Q8NE09 1264 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 NSUN5Q96P11 429 aaKnown RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 CSRNP1Q96S65 589 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 MDFIQ99750 246 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 DNAJB12Q9NXW2 375 aaKnown RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 NOP53Q9NZM5 478 aaKnown RBP6.97□□□□□ -1.29
RTN4-215ENST00000491592 AMOTL2Q9Y2J4 779 aa6.97□□□□□ -1.29
RTN4-215ENST00000491592 ADARB2-AS1A8MUL3 147 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 EREGO14944 169 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 CES1P23141 567 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 PLCB3Q01970 1234 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 FBXO33Q7Z6M2 555 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 TRPM4Q8TD43 1214 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 BTBD6Q96KE9 485 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 IGFLR1Q9H665 355 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 ZFYVE28Q9HCC9 887 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 SLC6A14Q9UN76 642 aa6.96□□□□□ -1.3
RTN4-215ENST00000491592 ELOA3CA0A087WX78 387 aaPredicted RBP6.95□□□□□ -1.3
RTN4-215ENST00000491592 ELOA3DA6NLF2 546 aaPredicted RBP6.95□□□□□ -1.3
RTN4-215ENST00000491592 KIF4AO95239 1232 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 FURINP09958 794 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 EPXP11678 715 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 MLLT1Q03111 559 aaPredicted RBP6.95□□□□□ -1.3
RTN4-215ENST00000491592 ELOA3BQ3SY89 546 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 EAPPQ56P03 285 aaPredicted RBP6.95□□□□□ -1.3
RTN4-215ENST00000491592 COL13A1Q5TAT6 717 aaPredicted RBP6.95□□□□□ -1.3
RTN4-215ENST00000491592 USPL1Q5W0Q7 1092 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 ELOA3Q8NG57 546 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
RTN4-215ENST00000491592 POLR3DP05423 398 aaPredicted RBP6.94□□□□□ -1.3
RTN4-215ENST00000491592 HOXB4P17483 251 aaPredicted RBP6.94□□□□□ -1.3
RTN4-215ENST00000491592 ATP2B2Q01814 1243 aa6.94□□□□□ -1.3
RTN4-215ENST00000491592 HYAL2Q12891 473 aa6.94□□□□□ -1.3
RTN4-215ENST00000491592 PCSK7Q16549 785 aa6.94□□□□□ -1.3
RTN4-215ENST00000491592 PMEPA1Q969W9 287 aa6.94□□□□□ -1.3
RTN4-215ENST00000491592 BCL2L13Q9BXK5 485 aa6.94□□□□□ -1.3
RTN4-215ENST00000491592 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
RTN4-215ENST00000491592 ZBTB42B2RXF5 422 aa6.93□□□□□ -1.3
RTN4-215ENST00000491592 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
RTN4-215ENST00000491592 EIF2AK2P19525 551 aaKnown RBP6.93□□□□□ -1.3
RTN4-215ENST00000491592 RBM25P49756 843 aaKnown RBP6.93□□□□□ -1.3
RTN4-215ENST00000491592 NCAPG2Q86XI2 1143 aa6.93□□□□□ -1.3
RTN4-215ENST00000491592 FOXD4L4Q8WXT5 416 aaPredicted RBP6.93□□□□□ -1.3
RTN4-215ENST00000491592 SETDB2Q96T68 719 aa6.93□□□□□ -1.3
RTN4-215ENST00000491592 SUV39H2Q9H5I1 410 aa6.93□□□□□ -1.3
RTN4-215ENST00000491592 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
RTN4-215ENST00000491592 C1QTNF9BB2RNN3 333 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 EDN3P14138 238 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 CPB1P15086 417 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms