RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 EXOSC9Q06265 439 aaKnown RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
HDAC3-211ENST00000491581 TBC1D10BQ4KMP7 808 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 RBM26Q5T8P6 1007 aaKnown RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 CCDC30Q5VVM6 783 aa11.49□□□□□ -0.57
HDAC3-211ENST00000491581 CYP4F22Q6NT55 531 aa11.49□□□□□ -0.57
HDAC3-211ENST00000491581 PNMA8AQ86V59 439 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 MXD3Q9BW11 206 aa11.49□□□□□ -0.57
HDAC3-211ENST00000491581 BCL2L13Q9BXK5 485 aa11.49□□□□□ -0.57
HDAC3-211ENST00000491581 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
HDAC3-211ENST00000491581 CWC25Q9NXE8 425 aaPredicted RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 ABT1Q9ULW3 272 aaKnown RBP11.49□□□□□ -0.57
HDAC3-211ENST00000491581 F6X3S4 739 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 AOC2O75106 756 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 PCCAP05165 728 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-211ENST00000491581 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 SUPT20HQ8NEM7 779 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 TMX4Q9H1E5 349 aaPredicted RBP11.48□□□□□ -0.57
HDAC3-211ENST00000491581 GREM2Q9H772 168 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 ADARB2Q9NS39 739 aaKnown RBP11.48□□□□□ -0.57
HDAC3-211ENST00000491581 CNOT7Q9UIV1 285 aaKnown RBP11.48□□□□□ -0.57
HDAC3-211ENST00000491581 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
HDAC3-211ENST00000491581 THSD7BQ9C0I4 1608 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 SNAP23O00161 211 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 PDE8AO60658 829 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 UFL1O94874 794 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 KLRK1P26718 216 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
HDAC3-211ENST00000491581 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-211ENST00000491581 USP50Q70EL3 339 aaPredicted RBP11.47□□□□□ -0.57
HDAC3-211ENST00000491581 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 TNS4Q8IZW8 715 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 CCDC191Q8NCU4 936 aa11.47□□□□□ -0.57
HDAC3-211ENST00000491581 WDR33Q9C0J8 1336 aaKnown RBP11.46□□□□□ -0.57
HDAC3-211ENST00000491581 RASSF10A6NK89 507 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 ANP32CO43423 234 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 VAMP4O75379 141 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 CTSWP56202 376 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 CCDC27Q2M243 656 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 USP48Q86UV5 1035 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 ZIC5Q96T25 663 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 ANKIB1Q9P2G1 1089 aa11.46□□□□□ -0.57
HDAC3-211ENST00000491581 CELF2O95319 508 aaKnown RBP11.45□□□□□ -0.58
HDAC3-211ENST00000491581 FLIIQ13045 1269 aa11.45□□□□□ -0.58
HDAC3-211ENST00000491581 CDHR2Q9BYE9 1310 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 DDX58O95786 925 aaKnown RBP11.44□□□□□ -0.58
HDAC3-211ENST00000491581 LBX1P52954 281 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 CASP7P55210 303 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-211ENST00000491581 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 CCDC152Q4G0S7 254 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 CAPNS2Q96L46 248 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 STK31Q9BXU1 1019 aa11.44□□□□□ -0.58
HDAC3-211ENST00000491581 H7C1W4 665 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 GCKRQ14397 625 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 TNIP1Q15025 636 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 ANKRD18AQ8IVF6 992 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 VPS33BQ9H267 617 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 GGA1Q9UJY5 639 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 MINPP1Q9UNW1 487 aa11.43□□□□□ -0.58
HDAC3-211ENST00000491581 HSPA8P11142 646 aaKnown RBP11.42□□□□□ -0.58
HDAC3-211ENST00000491581 PRAMEF18Q5VWM3 479 aa11.42□□□□□ -0.58
HDAC3-211ENST00000491581 TMC4Q7Z404 712 aa11.42□□□□□ -0.58
HDAC3-211ENST00000491581 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-211ENST00000491581 ZNF594Q96JF6 807 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-211ENST00000491581 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
HDAC3-211ENST00000491581 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
HDAC3-211ENST00000491581 PGAP2Q9UHJ9 254 aa11.42□□□□□ -0.58
HDAC3-211ENST00000491581 TLL2Q9Y6L7 1015 aa11.42□□□□□ -0.58
HDAC3-211ENST00000491581 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 IL16Q14005 1332 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 H7C1D1 291 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 TAF5LO75529 589 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 ITGA6P23229 1130 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 FOXO4P98177 505 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 SAPCD2Q86UD0 394 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 DNAAF4Q8WXU2 420 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 GGA3Q9NZ52 723 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 PCDHAC2Q9Y5I4 1007 aa11.41□□□□□ -0.58
HDAC3-211ENST00000491581 XDHP47989 1333 aa11.4□□□□□ -0.58
HDAC3-211ENST00000491581 G3V3G9 751 aa11.4□□□□□ -0.58
HDAC3-211ENST00000491581 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
HDAC3-211ENST00000491581 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-211ENST00000491581 NEXNQ0ZGT2 675 aa11.4□□□□□ -0.58
HDAC3-211ENST00000491581 KIF4BQ2VIQ3 1234 aa11.4□□□□□ -0.58
HDAC3-211ENST00000491581 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
HDAC3-211ENST00000491581 EYA3Q99504 573 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms