RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SCN9AQ15858 1988 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 PCCAP05165 728 aaPredicted RBP10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZNF280AP59817 542 aaPredicted RBP10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 RGMBQ6NW40 437 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 CCDC102AQ96A19 550 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZNF428Q96B54 188 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZIC5Q96T25 663 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 CHMP4AQ9BY43 222 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZC3H12CQ9C0D7 883 aaKnown RBP10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZNF408Q9H9D4 720 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 GBA2Q9HCG7 927 aaPredicted RBP10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 KCNQ5Q9NR82 932 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 SAGE1Q9NXZ1 904 aa10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
APOBEC3F-204ENST00000491387 PSME4Q14997 1843 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 PDE4DIPQ5VU43 2346 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 CALD1Q05682 793 aaKnown RBP10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 TBC1D10BQ4KMP7 808 aaPredicted RBP10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 RIC3Q7Z5B4 369 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 C2orf69Q8N8R5 385 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 DCPSQ96C86 337 aaKnown RBP10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 GMLQ99445 158 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 MCOLN1Q9GZU1 580 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 CACNA1FO60840 1977 aa10.95□□□□□ -0.66
APOBEC3F-204ENST00000491387 PDE8AO60658 829 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 SLC34A2O95436 690 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 GNAI1P63096 354 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 FKBP1BP68106 108 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 KIF4BQ2VIQ3 1234 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 DLK2Q6UY11 383 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 SEC31BQ9NQW1 1179 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 A0A1B0GUL6 1792 aa10.94□□□□□ -0.66
APOBEC3F-204ENST00000491387 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 CCDC85CA6NKD9 419 aa10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 UFL1O94874 794 aa10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 SLC10A3P09131 477 aa10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 RTL5Q5HYW3 569 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 RSBN1LQ6PCB5 846 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 METTL22Q9BUU2 404 aaPredicted RBP10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
APOBEC3F-204ENST00000491387 XDHP47989 1333 aa10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 ADM5C9JUS6 153 aa10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 PODNQ7Z5L7 613 aa10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 MYD88Q99836 296 aa10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 GGA3Q9NZ52 723 aa10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 ANKIB1Q9P2G1 1089 aa10.92□□□□□ -0.66
APOBEC3F-204ENST00000491387 APAF1O14727 1248 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 DDX58O95786 925 aaKnown RBP10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 ATP2B4P23634 1241 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 MMP14P50281 582 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 ZNF157P51786 506 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 DGKZQ13574 1117 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 RBM26Q5T8P6 1007 aaKnown RBP10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 CCDC30Q5VVM6 783 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 ANKRD18AQ8IVF6 992 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 C8orf58Q8NAV2 365 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 CDCA5Q96FF9 252 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 RNF186Q9NXI6 227 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 AKAP11Q9UKA4 1901 aa10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 ZNF646O15015 1829 aaPredicted RBP10.91□□□□□ -0.66
APOBEC3F-204ENST00000491387 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 USP17L8P0C7I0 530 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 SCARF1Q14162 830 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 KSR2Q6VAB6 950 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 CSRNP1Q96S65 589 aa10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 CDC5LQ99459 802 aaKnown RBP10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 BSDC1Q9NW68 430 aaPredicted RBP10.9□□□□□ -0.66
APOBEC3F-204ENST00000491387 MED23Q9ULK4 1368 aa10.9□□□□□ -0.67
APOBEC3F-204ENST00000491387 ASTN2O75129 1339 aaPredicted RBP10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 G3V3G9 751 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 IGKV5-2P06315 115 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 CTSWP56202 376 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 ANGEL2Q5VTE6 544 aaKnown RBP10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 MYOZ2Q9NPC6 264 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 MINPP1Q9UNW1 487 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 PAPPA2Q9BXP8 1791 aa10.89□□□□□ -0.67
APOBEC3F-204ENST00000491387 ELL2O00472 640 aaPredicted RBP10.88□□□□□ -0.67
APOBEC3F-204ENST00000491387 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
APOBEC3F-204ENST00000491387 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms