RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 UFL1O94874 794 aa39.94■■■■□ 3.98
LDB1-204ENST00000490751 PLA2G12BQ9BX93 195 aa39.94■■■■□ 3.98
LDB1-204ENST00000490751 GGA1Q9UJY5 639 aa39.94■■■■□ 3.98
LDB1-204ENST00000490751 USP50Q70EL3 339 aaPredicted RBP39.93■■■■□ 3.98
LDB1-204ENST00000490751 E9PSI1 815 aa39.92■■■■□ 3.98
LDB1-204ENST00000490751 BEND3Q5T5X7 828 aa39.92■■■■□ 3.98
LDB1-204ENST00000490751 BCL2L13Q9BXK5 485 aa39.92■■■■□ 3.98
LDB1-204ENST00000490751 CREBZFQ9NS37 354 aa39.92■■■■□ 3.98
LDB1-204ENST00000490751 DOK7Q18PE1 504 aa39.91■■■■□ 3.98
LDB1-204ENST00000490751 CNTROBQ8N137 903 aa39.91■■■■□ 3.98
LDB1-204ENST00000490751 ZC3H12CQ9C0D7 883 aaKnown RBP39.91■■■■□ 3.98
LDB1-204ENST00000490751 ADARB2Q9NS39 739 aaKnown RBP39.91■■■■□ 3.98
LDB1-204ENST00000490751 XDHP47989 1333 aa39.91■■■■□ 3.98
LDB1-204ENST00000490751 ECE2O60344 883 aa39.9■■■■□ 3.98
LDB1-204ENST00000490751 JMYQ8N9B5 988 aa39.89■■■■□ 3.98
LDB1-204ENST00000490751 BSDC1Q9NW68 430 aaPredicted RBP39.87■■■■□ 3.97
LDB1-204ENST00000490751 PSMD14O00487 310 aa39.86■■■■□ 3.97
LDB1-204ENST00000490751 SLFN5Q08AF3 891 aa39.86■■■■□ 3.97
LDB1-204ENST00000490751 FAM161AQ3B820 660 aa39.86■■■■□ 3.97
LDB1-204ENST00000490751 SCN9AQ15858 1988 aa39.85■■■■□ 3.97
LDB1-204ENST00000490751 MINPP1Q9UNW1 487 aa39.85■■■■□ 3.97
LDB1-204ENST00000490751 ZBTB12Q9Y330 459 aaPredicted RBP39.85■■■■□ 3.97
LDB1-204ENST00000490751 CSF1RP07333 972 aa39.84■■■■□ 3.97
LDB1-204ENST00000490751 ITGA6P23229 1130 aa39.84■■■■□ 3.97
LDB1-204ENST00000490751 ATP2B4P23634 1241 aa39.84■■■■□ 3.97
LDB1-204ENST00000490751 G3V3G9 751 aa39.83■■■■□ 3.97
LDB1-204ENST00000490751 IGHMBP2P38935 993 aaKnown RBP39.83■■■■□ 3.97
LDB1-204ENST00000490751 DCAF8Q5TAQ9 597 aa39.83■■■■□ 3.97
LDB1-204ENST00000490751 KCNQ5Q9NR82 932 aa39.83■■■■□ 3.97
LDB1-204ENST00000490751 TMEM88BA6NKF7 163 aa39.82■■■■□ 3.97
LDB1-204ENST00000490751 SLC4A10Q6U841 1118 aa39.82■■■■□ 3.97
LDB1-204ENST00000490751 CNOT7Q9UIV1 285 aaKnown RBP39.82■■■■□ 3.97
LDB1-204ENST00000490751 CDCA7LQ96GN5 454 aa39.81■■■■□ 3.96
LDB1-204ENST00000490751 SHTN1A0MZ66 631 aa39.8■■■■□ 3.96
LDB1-204ENST00000490751 MRPL50Q8N5N7 158 aaKnown RBP39.8■■■■□ 3.96
LDB1-204ENST00000490751 GRM8O00222 908 aa39.79■■■■□ 3.96
LDB1-204ENST00000490751 MICALL2Q8IY33 904 aa39.79■■■■□ 3.96
LDB1-204ENST00000490751 DPF2Q92785 391 aa39.79■■■■□ 3.96
LDB1-204ENST00000490751 MKRN1Q9UHC7 482 aaKnown RBP39.79■■■■□ 3.96
LDB1-204ENST00000490751 H7C1D1 291 aa39.78■■■■□ 3.96
LDB1-204ENST00000490751 ALDH1L1O75891 902 aa39.78■■■■□ 3.96
LDB1-204ENST00000490751 FOXO4P98177 505 aa39.78■■■■□ 3.96
LDB1-204ENST00000490751 SRCIN1Q9C0H9 1055 aa39.78■■■■□ 3.96
LDB1-204ENST00000490751 PSME4Q14997 1843 aa39.77■■■■□ 3.96
LDB1-204ENST00000490751 TRPM4Q8TD43 1214 aa39.77■■■■□ 3.96
LDB1-204ENST00000490751 MPHOSPH8Q99549 860 aa39.77■■■■□ 3.96
LDB1-204ENST00000490751 WTIPA6NIX2 430 aaPredicted RBP39.76■■■■□ 3.96
LDB1-204ENST00000490751 RPS12P25398 132 aaKnown RBP39.76■■■■□ 3.96
LDB1-204ENST00000490751 CCT4P50991 539 aaKnown RBP39.76■■■■□ 3.96
LDB1-204ENST00000490751 C9orf78Q9NZ63 289 aaPredicted RBP39.76■■■■□ 3.96
LDB1-204ENST00000490751 MED23Q9ULK4 1368 aa39.75■■■■□ 3.95
LDB1-204ENST00000490751 ANKRD18BA2A2Z9 1011 aa39.75■■■■□ 3.95
LDB1-204ENST00000490751 HIRAP54198 1017 aaPredicted RBP39.75■■■■□ 3.95
LDB1-204ENST00000490751 SSH1Q8WYL5 1049 aa39.75■■■■□ 3.95
LDB1-204ENST00000490751 CHMP3Q9Y3E7 222 aa39.74■■■■□ 3.95
LDB1-204ENST00000490751 CNTNAP1P78357 1384 aa39.73■■■■□ 3.95
LDB1-204ENST00000490751 TRPM7Q96QT4 1865 aa39.73■■■■□ 3.95
LDB1-204ENST00000490751 FMR1Q06787 632 aaKnown RBP eCLIP39.73■■■■□ 3.95
LDB1-204ENST00000490751 VIL1P09327 827 aaKnown RBP39.72■■■■□ 3.95
LDB1-204ENST00000490751 EPHA10Q5JZY3 1008 aa39.72■■■■□ 3.95
LDB1-204ENST00000490751 PTPRCP08575 1304 aa39.71■■■■□ 3.95
LDB1-204ENST00000490751 TRAF5O00463 557 aa39.71■■■■□ 3.95
LDB1-204ENST00000490751 IFIT5Q13325 482 aaKnown RBP39.71■■■■□ 3.95
LDB1-204ENST00000490751 LMBR1LQ6UX01 489 aa39.71■■■■□ 3.95
LDB1-204ENST00000490751 TRMT2AQ8IZ69 625 aaKnown RBP39.71■■■■□ 3.95
LDB1-204ENST00000490751 ZC3H15Q8WU90 426 aaKnown RBP39.71■■■■□ 3.95
LDB1-204ENST00000490751 ANKRD2Q9GZV1 360 aa39.71■■■■□ 3.95
LDB1-204ENST00000490751 PGAP2Q9UHJ9 254 aa39.71■■■■□ 3.95
LDB1-204ENST00000490751 SAMD7Q7Z3H4 446 aa39.7■■■■□ 3.95
LDB1-204ENST00000490751 LEMD3Q9Y2U8 911 aa39.7■■■■□ 3.95
LDB1-204ENST00000490751 A0A1B0GUL6 1792 aa39.69■■■■□ 3.94
LDB1-204ENST00000490751 PODNQ7Z5L7 613 aa39.68■■■■□ 3.94
LDB1-204ENST00000490751 CHRNDQ07001 517 aa39.67■■■■□ 3.94
LDB1-204ENST00000490751 TBC1D10BQ4KMP7 808 aaPredicted RBP39.67■■■■□ 3.94
LDB1-204ENST00000490751 GLIS2Q9BZE0 524 aaPredicted RBP39.67■■■■□ 3.94
LDB1-204ENST00000490751 ZNF804BA4D1E1 1349 aa39.66■■■■□ 3.94
LDB1-204ENST00000490751 ZNF609O15014 1411 aa39.66■■■■□ 3.94
LDB1-204ENST00000490751 ALDH1L2Q3SY69 923 aa39.66■■■■□ 3.94
LDB1-204ENST00000490751 RSBN1LQ6PCB5 846 aaPredicted RBP39.66■■■■□ 3.94
LDB1-204ENST00000490751 PCNTO95613 3336 aa39.66■■■■□ 3.94
LDB1-204ENST00000490751 EGFRP00533 1210 aa39.65■■■■□ 3.94
LDB1-204ENST00000490751 ABT1Q9ULW3 272 aaKnown RBP39.65■■■■□ 3.94
LDB1-204ENST00000490751 RBM26Q5T8P6 1007 aaKnown RBP39.64■■■■□ 3.94
LDB1-204ENST00000490751 TXNRD3Q86VQ6 643 aa39.64■■■■□ 3.94
LDB1-204ENST00000490751 SUCLG2Q96I99 432 aa39.64■■■■□ 3.94
LDB1-204ENST00000490751 USP17L3A6NCW0 530 aa39.63■■■■□ 3.93
LDB1-204ENST00000490751 USP17L4A6NCW7 530 aa39.63■■■■□ 3.93
LDB1-204ENST00000490751 NBPF7P0C2Y1 421 aaPredicted RBP39.63■■■■□ 3.93
LDB1-204ENST00000490751 CCDC57Q2TAC2 916 aa39.63■■■■□ 3.93
LDB1-204ENST00000490751 USP17L1Q7RTZ2 530 aa39.63■■■■□ 3.93
LDB1-204ENST00000490751 AGBL3Q8NEM8 1001 aa39.63■■■■□ 3.93
LDB1-204ENST00000490751 SMC4Q9NTJ3 1288 aa39.63■■■■□ 3.93
LDB1-204ENST00000490751 RASSF10A6NK89 507 aa39.62■■■■□ 3.93
LDB1-204ENST00000490751 KLRK1P26718 216 aa39.62■■■■□ 3.93
LDB1-204ENST00000490751 KCNJ4P48050 445 aa39.62■■■■□ 3.93
LDB1-204ENST00000490751 ZNF646O15015 1829 aaPredicted RBP39.62■■■■□ 3.93
LDB1-204ENST00000490751 UTYO14607 1347 aa39.62■■■■□ 3.93
LDB1-204ENST00000490751 TAF7LQ5H9L4 462 aa39.61■■■■□ 3.93
LDB1-204ENST00000490751 CST9Q5W186 159 aa39.61■■■■□ 3.93
LDB1-204ENST00000490751 CDC37L1Q7L3B6 337 aa39.61■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms