RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
VARS2-210ENST00000490699 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
VARS2-210ENST00000490699 SIL1Q9H173 461 aa13.53□□□□□ -0.24
VARS2-210ENST00000490699 EYA2O00167 538 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 PPEF1O14829 653 aaPredicted RBP13.52□□□□□ -0.25
VARS2-210ENST00000490699 PTPN12Q05209 780 aaKnown RBP13.52□□□□□ -0.25
VARS2-210ENST00000490699 METTL24Q5JXM2 366 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 C3orf67Q6ZVT6 689 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 KIF1BPQ96EK5 621 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 SEC31BQ9NQW1 1179 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.25
VARS2-210ENST00000490699 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 MROH5Q6ZUA9 1318 aa13.52□□□□□ -0.25
VARS2-210ENST00000490699 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
VARS2-210ENST00000490699 KCNJ4P48050 445 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 TTLL6Q8N841 843 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 ZNF594Q96JF6 807 aaPredicted RBP13.51□□□□□ -0.25
VARS2-210ENST00000490699 LRRCC1Q9C099 1032 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 ANKRD2Q9GZV1 360 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
VARS2-210ENST00000490699 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
VARS2-210ENST00000490699 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
VARS2-210ENST00000490699 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 APBB1O00213 710 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 DPEP1P16444 411 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 CHRNA5P30532 468 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
VARS2-210ENST00000490699 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
VARS2-210ENST00000490699 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
VARS2-210ENST00000490699 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
VARS2-210ENST00000490699 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
VARS2-210ENST00000490699 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
VARS2-210ENST00000490699 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
VARS2-210ENST00000490699 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
VARS2-210ENST00000490699 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
VARS2-210ENST00000490699 LRP5O75197 1615 aa13.49□□□□□ -0.25
VARS2-210ENST00000490699 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 GABBR2O75899 941 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
VARS2-210ENST00000490699 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 ATP6V0A2Q9Y487 856 aa13.48□□□□□ -0.25
VARS2-210ENST00000490699 XDHP47989 1333 aa13.47□□□□□ -0.25
VARS2-210ENST00000490699 IGHDP01880 384 aa13.47□□□□□ -0.25
VARS2-210ENST00000490699 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
VARS2-210ENST00000490699 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
VARS2-210ENST00000490699 SP8Q8IXZ3 490 aa13.47□□□□□ -0.25
VARS2-210ENST00000490699 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
VARS2-210ENST00000490699 IFIT1P09914 478 aaKnown RBP13.46□□□□□ -0.25
VARS2-210ENST00000490699 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
VARS2-210ENST00000490699 SLC5A1P13866 664 aa13.46□□□□□ -0.25
VARS2-210ENST00000490699 CHRNDQ07001 517 aa13.46□□□□□ -0.25
VARS2-210ENST00000490699 PUM3Q15397 648 aaKnown RBP13.46□□□□□ -0.25
VARS2-210ENST00000490699 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
VARS2-210ENST00000490699 GORABQ5T7V8 394 aa13.46□□□□□ -0.25
VARS2-210ENST00000490699 SUPT20HQ8NEM7 779 aa13.46□□□□□ -0.25
VARS2-210ENST00000490699 RIPOR2Q9Y4F9 1068 aa13.46□□□□□ -0.25
VARS2-210ENST00000490699 TAF1P21675 1872 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 PDE8BO95263 885 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 TFCP2Q12800 502 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 DPP8Q6V1X1 898 aaPredicted RBP13.45□□□□□ -0.26
VARS2-210ENST00000490699 ATG9AQ7Z3C6 839 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 MPNDQ8N594 471 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 PUS3Q9BZE2 481 aaKnown RBP13.45□□□□□ -0.26
VARS2-210ENST00000490699 GPR108Q9NPR9 543 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 MINPP1Q9UNW1 487 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
VARS2-210ENST00000490699 BCS1LQ9Y276 419 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 LEMD3Q9Y2U8 911 aa13.45□□□□□ -0.26
VARS2-210ENST00000490699 KDM2BQ8NHM5 1336 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 G3V3G9 751 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 ATP2B4P23634 1241 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 NUCB1Q02818 461 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 AACSQ86V21 672 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 LPIN2Q92539 896 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 EYA3Q99504 573 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 IL1RAPL2Q9NP60 686 aa13.44□□□□□ -0.26
VARS2-210ENST00000490699 LRRC37AA6NMS7 1700 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 C6orf229H3BNL8 230 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms