RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 IGHMBP2P38935 993 aaKnown RBP16.68■□□□□ 0.26
SHC1-211ENST00000490667 EPS15P42566 896 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 SCNN1DP51172 638 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 FOXO4P98177 505 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 DBNDD1Q9H9R9 158 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 MINPP1Q9UNW1 487 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 PTPRCP08575 1304 aa16.68■□□□□ 0.26
SHC1-211ENST00000490667 COL4A1P02462 1669 aa16.67■□□□□ 0.26
SHC1-211ENST00000490667 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
SHC1-211ENST00000490667 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
SHC1-211ENST00000490667 HTRA3P83110 453 aa16.67■□□□□ 0.26
SHC1-211ENST00000490667 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
SHC1-211ENST00000490667 BCL2L13Q9BXK5 485 aa16.67■□□□□ 0.26
SHC1-211ENST00000490667 XDHP47989 1333 aa16.67■□□□□ 0.26
SHC1-211ENST00000490667 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 G3V3G9 751 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
SHC1-211ENST00000490667 DCAF8Q5TAQ9 597 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 DNAJC5GQ8N7S2 189 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 MPHOSPH8Q99549 860 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 GPRC5DQ9NZD1 345 aa16.66■□□□□ 0.26
SHC1-211ENST00000490667 ECE2O60344 883 aa16.65■□□□□ 0.26
SHC1-211ENST00000490667 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
SHC1-211ENST00000490667 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
SHC1-211ENST00000490667 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
SHC1-211ENST00000490667 KCNQ5Q9NR82 932 aa16.65■□□□□ 0.26
SHC1-211ENST00000490667 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
SHC1-211ENST00000490667 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
SHC1-211ENST00000490667 IFIT5Q13325 482 aaKnown RBP16.64■□□□□ 0.25
SHC1-211ENST00000490667 ADARB2Q9NS39 739 aaKnown RBP16.64■□□□□ 0.25
SHC1-211ENST00000490667 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
SHC1-211ENST00000490667 TAF1P21675 1872 aa16.63■□□□□ 0.25
SHC1-211ENST00000490667 PSMD14O00487 310 aa16.63■□□□□ 0.25
SHC1-211ENST00000490667 ITGBL1O95965 494 aaPredicted RBP16.63■□□□□ 0.25
SHC1-211ENST00000490667 NBPF7P0C2Y1 421 aaPredicted RBP16.63■□□□□ 0.25
SHC1-211ENST00000490667 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
SHC1-211ENST00000490667 MAP1SQ66K74 1059 aaPredicted RBP16.63■□□□□ 0.25
SHC1-211ENST00000490667 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
SHC1-211ENST00000490667 ANKRD2Q9GZV1 360 aa16.63■□□□□ 0.25
SHC1-211ENST00000490667 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
SHC1-211ENST00000490667 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
SHC1-211ENST00000490667 ZBTB12Q9Y330 459 aaPredicted RBP16.63■□□□□ 0.25
SHC1-211ENST00000490667 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHC1-211ENST00000490667 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
SHC1-211ENST00000490667 DPF2Q92785 391 aa16.62■□□□□ 0.25
SHC1-211ENST00000490667 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
SHC1-211ENST00000490667 NOB1Q9ULX3 412 aaKnown RBP16.62■□□□□ 0.25
SHC1-211ENST00000490667 UTYO14607 1347 aa16.62■□□□□ 0.25
SHC1-211ENST00000490667 BRPF1P55201 1214 aaPredicted RBP16.61■□□□□ 0.25
SHC1-211ENST00000490667 CHRNDQ07001 517 aa16.61■□□□□ 0.25
SHC1-211ENST00000490667 LRRC37AA6NMS7 1700 aa16.61■□□□□ 0.25
SHC1-211ENST00000490667 H7C1D1 291 aa16.6■□□□□ 0.25
SHC1-211ENST00000490667 VIL1P09327 827 aaKnown RBP16.6■□□□□ 0.25
SHC1-211ENST00000490667 RPS12P25398 132 aaKnown RBP16.6■□□□□ 0.25
SHC1-211ENST00000490667 RARSP54136 660 aaKnown RBP16.6■□□□□ 0.25
SHC1-211ENST00000490667 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
SHC1-211ENST00000490667 PODNQ7Z5L7 613 aa16.6■□□□□ 0.25
SHC1-211ENST00000490667 KLRG1Q96E93 195 aa16.6■□□□□ 0.25
SHC1-211ENST00000490667 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
SHC1-211ENST00000490667 PASKQ96RG2 1323 aa16.6■□□□□ 0.25
SHC1-211ENST00000490667 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
SHC1-211ENST00000490667 MICALL2Q8IY33 904 aa16.59■□□□□ 0.25
SHC1-211ENST00000490667 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
SHC1-211ENST00000490667 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
SHC1-211ENST00000490667 ZNF804BA4D1E1 1349 aa16.59■□□□□ 0.25
SHC1-211ENST00000490667 SCN4AP35499 1836 aa16.59■□□□□ 0.25
SHC1-211ENST00000490667 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
SHC1-211ENST00000490667 TAF5LO75529 589 aa16.58■□□□□ 0.24
SHC1-211ENST00000490667 KCNJ4P48050 445 aa16.58■□□□□ 0.24
SHC1-211ENST00000490667 HIRAP54198 1017 aaPredicted RBP16.58■□□□□ 0.24
SHC1-211ENST00000490667 HELBQ8NG08 1087 aaPredicted RBP16.58■□□□□ 0.24
SHC1-211ENST00000490667 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.24
SHC1-211ENST00000490667 CREBZFQ9NS37 354 aa16.58■□□□□ 0.24
SHC1-211ENST00000490667 CACNA1FO60840 1977 aa16.58■□□□□ 0.24
SHC1-211ENST00000490667 CEP350Q5VT06 3117 aa16.58■□□□□ 0.24
SHC1-211ENST00000490667 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
SHC1-211ENST00000490667 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
SHC1-211ENST00000490667 ZC3H15Q8WU90 426 aaKnown RBP16.57■□□□□ 0.24
SHC1-211ENST00000490667 COA1Q9GZY4 146 aa16.57■□□□□ 0.24
SHC1-211ENST00000490667 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
SHC1-211ENST00000490667 CNNM1Q9NRU3 951 aa16.57■□□□□ 0.24
SHC1-211ENST00000490667 PGAP2Q9UHJ9 254 aa16.57■□□□□ 0.24
SHC1-211ENST00000490667 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 TMEM88BA6NKF7 163 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 SNAP23O00161 211 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 PLIN1O60240 522 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 RABL6Q3YEC7 729 aaPredicted RBP16.56■□□□□ 0.24
SHC1-211ENST00000490667 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
SHC1-211ENST00000490667 RSBN1LQ6PCB5 846 aaPredicted RBP16.56■□□□□ 0.24
SHC1-211ENST00000490667 USP17L1Q7RTZ2 530 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 TRPM4Q8TD43 1214 aa16.56■□□□□ 0.24
SHC1-211ENST00000490667 KLRK1P26718 216 aa16.55■□□□□ 0.24
SHC1-211ENST00000490667 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
SHC1-211ENST00000490667 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
SHC1-211ENST00000490667 AGBL3Q8NEM8 1001 aa16.55■□□□□ 0.24
SHC1-211ENST00000490667 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms