RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SPEF2Q9C093 1822 aa20.2■□□□□ 0.82
COL2A1-207ENST00000490609 WTIPA6NIX2 430 aaPredicted RBP20.19■□□□□ 0.82
COL2A1-207ENST00000490609 MAP2K2P36507 400 aa20.19■□□□□ 0.82
COL2A1-207ENST00000490609 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
COL2A1-207ENST00000490609 CDC37L1Q7L3B6 337 aa20.19■□□□□ 0.82
COL2A1-207ENST00000490609 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
COL2A1-207ENST00000490609 MYD88Q99836 296 aa20.19■□□□□ 0.82
COL2A1-207ENST00000490609 TSKSQ9UJT2 592 aa20.19■□□□□ 0.82
COL2A1-207ENST00000490609 C6orf229H3BNL8 230 aa20.18■□□□□ 0.82
COL2A1-207ENST00000490609 ECE2O60344 883 aa20.18■□□□□ 0.82
COL2A1-207ENST00000490609 PAXIP1Q6ZW49 1069 aaPredicted RBP20.18■□□□□ 0.82
COL2A1-207ENST00000490609 H7C1D1 291 aa20.17■□□□□ 0.82
COL2A1-207ENST00000490609 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
COL2A1-207ENST00000490609 VIL1P09327 827 aaKnown RBP20.17■□□□□ 0.82
COL2A1-207ENST00000490609 GNAI1P63096 354 aa20.17■□□□□ 0.82
COL2A1-207ENST00000490609 TBC1D10BQ4KMP7 808 aaPredicted RBP20.17■□□□□ 0.82
COL2A1-207ENST00000490609 ABHD8Q96I13 439 aa20.17■□□□□ 0.82
COL2A1-207ENST00000490609 CCDC191Q8NCU4 936 aa20.16■□□□□ 0.82
COL2A1-207ENST00000490609 METTL22Q9BUU2 404 aaPredicted RBP20.16■□□□□ 0.82
COL2A1-207ENST00000490609 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
COL2A1-207ENST00000490609 ASTN2O75129 1339 aaPredicted RBP20.16■□□□□ 0.82
COL2A1-207ENST00000490609 IGKV5-2P06315 115 aa20.15■□□□□ 0.82
COL2A1-207ENST00000490609 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
COL2A1-207ENST00000490609 CCDC85AQ96PX6 553 aaPredicted RBP20.14■□□□□ 0.81
COL2A1-207ENST00000490609 FAM155AB1AL88 458 aaPredicted RBP20.13■□□□□ 0.81
COL2A1-207ENST00000490609 ADM5C9JUS6 153 aa20.13■□□□□ 0.81
COL2A1-207ENST00000490609 PDE8AO60658 829 aa20.13■□□□□ 0.81
COL2A1-207ENST00000490609 RPS12P25398 132 aaKnown RBP20.13■□□□□ 0.81
COL2A1-207ENST00000490609 RBM26Q5T8P6 1007 aaKnown RBP20.13■□□□□ 0.81
COL2A1-207ENST00000490609 GMLQ99445 158 aa20.13■□□□□ 0.81
COL2A1-207ENST00000490609 BRPF1P55201 1214 aaPredicted RBP20.12■□□□□ 0.81
COL2A1-207ENST00000490609 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
COL2A1-207ENST00000490609 EYA3Q99504 573 aa20.12■□□□□ 0.81
COL2A1-207ENST00000490609 CWC25Q9NXE8 425 aaPredicted RBP20.12■□□□□ 0.81
COL2A1-207ENST00000490609 CACNA1FO60840 1977 aa20.12■□□□□ 0.81
COL2A1-207ENST00000490609 AKAP11Q9UKA4 1901 aa20.12■□□□□ 0.81
COL2A1-207ENST00000490609 ZNF609O15014 1411 aa20.11■□□□□ 0.81
COL2A1-207ENST00000490609 UFL1O94874 794 aa20.11■□□□□ 0.81
COL2A1-207ENST00000490609 G2E3Q7L622 706 aa20.11■□□□□ 0.81
COL2A1-207ENST00000490609 KRT26Q7Z3Y9 468 aa20.11■□□□□ 0.81
COL2A1-207ENST00000490609 ZC3H12CQ9C0D7 883 aaKnown RBP20.11■□□□□ 0.81
COL2A1-207ENST00000490609 MAP3K2Q9Y2U5 619 aa20.11■□□□□ 0.81
COL2A1-207ENST00000490609 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
COL2A1-207ENST00000490609 HUNKP57058 714 aa20.1■□□□□ 0.81
COL2A1-207ENST00000490609 ZNF280AP59817 542 aaPredicted RBP20.1■□□□□ 0.81
COL2A1-207ENST00000490609 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
COL2A1-207ENST00000490609 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
COL2A1-207ENST00000490609 TTLL11Q8NHH1 800 aa20.1■□□□□ 0.81
COL2A1-207ENST00000490609 KIF4BQ2VIQ3 1234 aa20.09■□□□□ 0.81
COL2A1-207ENST00000490609 CCDC30Q5VVM6 783 aa20.09■□□□□ 0.81
COL2A1-207ENST00000490609 KSR2Q6VAB6 950 aa20.09■□□□□ 0.81
COL2A1-207ENST00000490609 BEGAINQ9BUH8 593 aa20.09■□□□□ 0.81
COL2A1-207ENST00000490609 ANKIB1Q9P2G1 1089 aa20.09■□□□□ 0.81
COL2A1-207ENST00000490609 GGA1Q9UJY5 639 aa20.09■□□□□ 0.81
COL2A1-207ENST00000490609 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
COL2A1-207ENST00000490609 CWF19L2Q2TBE0 894 aaKnown RBP20.08■□□□□ 0.81
COL2A1-207ENST00000490609 RGMBQ6NW40 437 aa20.07■□□□□ 0.8
COL2A1-207ENST00000490609 RSBN1LQ6PCB5 846 aaPredicted RBP20.07■□□□□ 0.8
COL2A1-207ENST00000490609 GREM2Q9H772 168 aa20.07■□□□□ 0.8
COL2A1-207ENST00000490609 GBA2Q9HCG7 927 aaPredicted RBP20.07■□□□□ 0.8
COL2A1-207ENST00000490609 MINPP1Q9UNW1 487 aa20.07■□□□□ 0.8
COL2A1-207ENST00000490609 XDHP47989 1333 aa20.06■□□□□ 0.8
COL2A1-207ENST00000490609 H7C1W4 665 aa20.06■□□□□ 0.8
COL2A1-207ENST00000490609 CTSWP56202 376 aa20.06■□□□□ 0.8
COL2A1-207ENST00000490609 NOGQ13253 232 aa20.06■□□□□ 0.8
COL2A1-207ENST00000490609 WWC1Q8IX03 1113 aa20.06■□□□□ 0.8
COL2A1-207ENST00000490609 DCPSQ96C86 337 aaKnown RBP20.06■□□□□ 0.8
COL2A1-207ENST00000490609 GGA3Q9NZ52 723 aa20.06■□□□□ 0.8
COL2A1-207ENST00000490609 NEURL1BA8MQ27 555 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 CA12O43570 354 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 CASP7P55210 303 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 SCARF1Q14162 830 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 CCDC27Q2M243 656 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 TXNRD3Q86VQ6 643 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 ANKRD18AQ8IVF6 992 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 AGBL3Q8NEM8 1001 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 MXD3Q9BW11 206 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 SCAF8Q9UPN6 1271 aaKnown RBP20.05■□□□□ 0.8
COL2A1-207ENST00000490609 A0A1B0GUL6 1792 aa20.05■□□□□ 0.8
COL2A1-207ENST00000490609 DDX58O95786 925 aaKnown RBP20.04■□□□□ 0.8
COL2A1-207ENST00000490609 HSP90B1P14625 803 aaKnown RBP20.04■□□□□ 0.8
COL2A1-207ENST00000490609 ATP2B4P23634 1241 aa20.04■□□□□ 0.8
COL2A1-207ENST00000490609 RGS19P49795 217 aa20.04■□□□□ 0.8
COL2A1-207ENST00000490609 CDCA5Q96FF9 252 aa20.04■□□□□ 0.8
COL2A1-207ENST00000490609 MCOLN1Q9GZU1 580 aa20.04■□□□□ 0.8
COL2A1-207ENST00000490609 BSDC1Q9NW68 430 aaPredicted RBP20.04■□□□□ 0.8
COL2A1-207ENST00000490609 KIF23Q02241 960 aaPredicted RBP20.03■□□□□ 0.8
COL2A1-207ENST00000490609 ANGEL2Q5VTE6 544 aaKnown RBP20.03■□□□□ 0.8
COL2A1-207ENST00000490609 DACT2Q5SW24 774 aa20.02■□□□□ 0.8
COL2A1-207ENST00000490609 PODNQ7Z5L7 613 aa20.02■□□□□ 0.8
COL2A1-207ENST00000490609 C2orf69Q8N8R5 385 aa20.02■□□□□ 0.8
COL2A1-207ENST00000490609 MYOZ2Q9NPC6 264 aa20.02■□□□□ 0.8
COL2A1-207ENST00000490609 MED23Q9ULK4 1368 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 SLC10A3P09131 477 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 USP17L8P0C7I0 530 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 KLRK1P26718 216 aa20.01■□□□□ 0.79
COL2A1-207ENST00000490609 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms