RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 NUTM2BA6NNL0 878 aaPredicted RBP19.22■□□□□ 0.67
SNX5-214ENST00000490175 NUTM2EB1AL46 878 aaPredicted RBP19.22■□□□□ 0.67
SNX5-214ENST00000490175 PDE8AO60658 829 aa19.22■□□□□ 0.67
SNX5-214ENST00000490175 MRE11P49959 708 aa19.22■□□□□ 0.67
SNX5-214ENST00000490175 NUTM2AQ8IVF1 878 aaPredicted RBP19.22■□□□□ 0.67
SNX5-214ENST00000490175 SMC3Q9UQE7 1217 aa19.22■□□□□ 0.67
SNX5-214ENST00000490175 ITGA6P23229 1130 aa19.21■□□□□ 0.67
SNX5-214ENST00000490175 RPS6KB1P23443 525 aa19.21■□□□□ 0.67
SNX5-214ENST00000490175 ZMYM1Q5SVZ6 1142 aa19.21■□□□□ 0.67
SNX5-214ENST00000490175 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
SNX5-214ENST00000490175 LOC102724428A0A0B4J2F2 783 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 SIK1P57059 783 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 GORABQ5T7V8 394 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
SNX5-214ENST00000490175 XAGE2Q96GT9 111 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 TBC1D2BQ9UPU7 963 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
SNX5-214ENST00000490175 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 RIC1Q4ADV7 1423 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 PDIA4P13667 645 aaKnown RBP19.2■□□□□ 0.66
SNX5-214ENST00000490175 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 DSCC1Q9BVC3 393 aa19.2■□□□□ 0.66
SNX5-214ENST00000490175 ZNF831Q5JPB2 1677 aa19.19■□□□□ 0.66
SNX5-214ENST00000490175 RNF113AO15541 343 aaKnown RBP19.19■□□□□ 0.66
SNX5-214ENST00000490175 PRPF40AO75400 957 aaKnown RBP19.19■□□□□ 0.66
SNX5-214ENST00000490175 CRKLP46109 303 aaKnown RBP19.19■□□□□ 0.66
SNX5-214ENST00000490175 LDHAL6AQ6ZMR3 332 aa19.19■□□□□ 0.66
SNX5-214ENST00000490175 SYNE4Q8N205 404 aa19.19■□□□□ 0.66
SNX5-214ENST00000490175 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
SNX5-214ENST00000490175 GREM2Q9H772 168 aa19.19■□□□□ 0.66
SNX5-214ENST00000490175 UBN2Q6ZU65 1347 aa19.19■□□□□ 0.66
SNX5-214ENST00000490175 LARGE1O95461 756 aa19.18■□□□□ 0.66
SNX5-214ENST00000490175 ACSBG1Q96GR2 724 aa19.18■□□□□ 0.66
SNX5-214ENST00000490175 CCDC85AQ96PX6 553 aaPredicted RBP19.18■□□□□ 0.66
SNX5-214ENST00000490175 ZFYP08048 801 aaPredicted RBP19.18■□□□□ 0.66
SNX5-214ENST00000490175 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.662e-10■■□□□ 13.6
SNX5-214ENST00000490175 PIP4K2BP78356 416 aa19.18■□□□□ 0.66
SNX5-214ENST00000490175 METTL24Q5JXM2 366 aa19.18■□□□□ 0.66
SNX5-214ENST00000490175 CCDC129Q6ZRS4 1044 aa19.18■□□□□ 0.66
SNX5-214ENST00000490175 LRP5O75197 1615 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 ME3Q16798 604 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 FOXD4L5Q5VV16 416 aaPredicted RBP19.17■□□□□ 0.66
SNX5-214ENST00000490175 CCDC83Q8IWF9 413 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 FOXD4L4Q8WXT5 416 aaPredicted RBP19.17■□□□□ 0.66
SNX5-214ENST00000490175 LARP6Q9BRS8 491 aaKnown RBP19.17■□□□□ 0.66
SNX5-214ENST00000490175 STX6O43752 255 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 MBD3O95983 291 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 ZSCAN22P10073 491 aaPredicted RBP19.17■□□□□ 0.66
SNX5-214ENST00000490175 ADORA1P30542 326 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 PARP10Q53GL7 1025 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 ZNF512BQ96KM6 892 aaPredicted RBP19.17■□□□□ 0.66
SNX5-214ENST00000490175 NEK1Q96PY6 1258 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 CNNM1Q9NRU3 951 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 TPCN1Q9ULQ1 816 aa19.17■□□□□ 0.66
SNX5-214ENST00000490175 HSP90B1P14625 803 aaKnown RBP19.16■□□□□ 0.66
SNX5-214ENST00000490175 SYT1P21579 422 aa19.16■□□□□ 0.66
SNX5-214ENST00000490175 GRPEL1Q9HAV7 217 aa19.16■□□□□ 0.66
SNX5-214ENST00000490175 A0A0G2JS52 829 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 CHGBP05060 677 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 CYP21A2P08686 494 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 HMGB1P09429 215 aaKnown RBP19.15■□□□□ 0.66
SNX5-214ENST00000490175 ATP6V1DQ9Y5K8 247 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 TAF6LQ9Y6J9 622 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 COL5A3P25940 1745 aaPredicted RBP19.15■□□□□ 0.66
SNX5-214ENST00000490175 GJB2P29033 226 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 FKBP4Q02790 459 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX5-214ENST00000490175 ITPK1Q13572 414 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 VGLL2Q8N8G2 317 aa19.15■□□□□ 0.66
SNX5-214ENST00000490175 CAMTA2O94983 1202 aa19.14■□□□□ 0.65
SNX5-214ENST00000490175 ZNF445P59923 1031 aa19.14■□□□□ 0.65
SNX5-214ENST00000490175 TOB2Q14106 344 aaPredicted RBP19.14■□□□□ 0.65
SNX5-214ENST00000490175 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.65
SNX5-214ENST00000490175 MYH14Q7Z406 1995 aaKnown RBP19.14■□□□□ 0.65
SNX5-214ENST00000490175 MAST3O60307 1309 aa19.14■□□□□ 0.65
SNX5-214ENST00000490175 PDE8BO95263 885 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 ST3GAL1Q11201 340 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 VPS72Q15906 364 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 GPT2Q8TD30 523 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 MROH5Q6ZUA9 1318 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 MYH7P12883 1935 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 LAMB2P55268 1798 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 NCLP19338 710 aaKnown RBP19.13■□□□□ 0.65
SNX5-214ENST00000490175 SUSD4Q5VX71 490 aa19.13■□□□□ 0.65
SNX5-214ENST00000490175 CAVIN1Q6NZI2 390 aaKnown RBP19.13■□□□□ 0.65
SNX5-214ENST00000490175 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
SNX5-214ENST00000490175 ARAP2Q8WZ64 1704 aa19.12■□□□□ 0.65
SNX5-214ENST00000490175 HSPD1P10809 573 aaKnown RBP19.12■□□□□ 0.65
SNX5-214ENST00000490175 TMEM87AQ8NBN3 555 aa19.12■□□□□ 0.65
SNX5-214ENST00000490175 AKAP11Q9UKA4 1901 aa19.12■□□□□ 0.65
SNX5-214ENST00000490175 F13A1P00488 732 aa19.12■□□□□ 0.65
SNX5-214ENST00000490175 PDCP20941 246 aa19.12■□□□□ 0.65
SNX5-214ENST00000490175 GAS2L3Q86XJ1 694 aa19.12■□□□□ 0.65
SNX5-214ENST00000490175 RTL9Q8NET4 1388 aa19.11■□□□□ 0.65
SNX5-214ENST00000490175 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
SNX5-214ENST00000490175 ZSCAN23Q3MJ62 389 aa19.11■□□□□ 0.65
SNX5-214ENST00000490175 NECAB1Q8N987 351 aa19.11■□□□□ 0.65
SNX5-214ENST00000490175 ZNF652Q9Y2D9 606 aa19.11■□□□□ 0.65
SNX5-214ENST00000490175 BCL9LQ86UU0 1499 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms