RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
UBP1-211ENST00000490112 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
UBP1-211ENST00000490112 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 SNPHO15079 494 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 ANKRD13DQ6ZTN6 518 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 PLBD2Q8NHP8 589 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.18
UBP1-211ENST00000490112 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
UBP1-211ENST00000490112 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
UBP1-211ENST00000490112 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 LAMB2P55268 1798 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 PYGBP11216 843 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
UBP1-211ENST00000490112 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 CHPF2Q9P2E5 772 aa13.89□□□□□ -0.19
UBP1-211ENST00000490112 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
UBP1-211ENST00000490112 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
UBP1-211ENST00000490112 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
UBP1-211ENST00000490112 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.88□□□□□ -0.19
UBP1-211ENST00000490112 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
UBP1-211ENST00000490112 TLL2Q9Y6L7 1015 aa13.88□□□□□ -0.19
UBP1-211ENST00000490112 H7C1D1 291 aa13.87□□□□□ -0.19
UBP1-211ENST00000490112 MAP2K2P36507 400 aa13.87□□□□□ -0.19
UBP1-211ENST00000490112 LBX1P52954 281 aa13.87□□□□□ -0.19
UBP1-211ENST00000490112 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
UBP1-211ENST00000490112 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
UBP1-211ENST00000490112 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
UBP1-211ENST00000490112 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
UBP1-211ENST00000490112 CST9Q5W186 159 aa13.87□□□□□ -0.19
UBP1-211ENST00000490112 PAXIP1Q6ZW49 1069 aaPredicted RBP13.87□□□□□ -0.19
UBP1-211ENST00000490112 HHIPL1Q96JK4 782 aa13.87□□□□□ -0.19
UBP1-211ENST00000490112 GPR101Q96P66 508 aaPredicted RBP13.87□□□□□ -0.19
UBP1-211ENST00000490112 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
UBP1-211ENST00000490112 RAD17O75943 681 aa13.86□□□□□ -0.19
UBP1-211ENST00000490112 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
UBP1-211ENST00000490112 WASHC4Q2M389 1173 aa13.86□□□□□ -0.19
UBP1-211ENST00000490112 SLC51AQ86UW1 340 aa13.86□□□□□ -0.19
UBP1-211ENST00000490112 DPF2Q92785 391 aa13.86□□□□□ -0.19
UBP1-211ENST00000490112 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
UBP1-211ENST00000490112 TRAF5O00463 557 aa13.85□□□□□ -0.19
UBP1-211ENST00000490112 CELF2O95319 508 aaKnown RBP13.85□□□□□ -0.19
UBP1-211ENST00000490112 HSPA8P11142 646 aaKnown RBP13.85□□□□□ -0.19
UBP1-211ENST00000490112 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
UBP1-211ENST00000490112 CDC37L1Q7L3B6 337 aa13.85□□□□□ -0.19
UBP1-211ENST00000490112 FAM89AQ96GI7 184 aa13.85□□□□□ -0.19
UBP1-211ENST00000490112 EYA3Q99504 573 aa13.85□□□□□ -0.19
UBP1-211ENST00000490112 CNOT7Q9UIV1 285 aaKnown RBP13.85□□□□□ -0.19
UBP1-211ENST00000490112 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
UBP1-211ENST00000490112 THSD7BQ9C0I4 1608 aa13.85□□□□□ -0.19
UBP1-211ENST00000490112 LRRC37AA6NMS7 1700 aa13.84□□□□□ -0.19
UBP1-211ENST00000490112 CA12O43570 354 aa13.84□□□□□ -0.19
UBP1-211ENST00000490112 RPS12P25398 132 aaKnown RBP13.84□□□□□ -0.19
UBP1-211ENST00000490112 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
UBP1-211ENST00000490112 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
UBP1-211ENST00000490112 SAPCD2Q86UD0 394 aa13.84□□□□□ -0.19
UBP1-211ENST00000490112 PCDHB8Q9UN66 801 aa13.84□□□□□ -0.19
UBP1-211ENST00000490112 DDX60Q8IY21 1712 aaKnown RBP13.84□□□□□ -0.19
UBP1-211ENST00000490112 ATP5J2-PTCD1G3V325 749 aa13.83□□□□□ -0.2
UBP1-211ENST00000490112 C6orf229H3BNL8 230 aa13.83□□□□□ -0.2
UBP1-211ENST00000490112 IRS4O14654 1257 aaPredicted RBP13.83□□□□□ -0.2
UBP1-211ENST00000490112 GNAI1P63096 354 aa13.83□□□□□ -0.2
UBP1-211ENST00000490112 FMR1Q06787 632 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBP1-211ENST00000490112 RIC3Q7Z5B4 369 aa13.83□□□□□ -0.2
UBP1-211ENST00000490112 IFT57Q9NWB7 429 aa13.83□□□□□ -0.2
UBP1-211ENST00000490112 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
UBP1-211ENST00000490112 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
UBP1-211ENST00000490112 GRM1Q13255 1194 aa13.82□□□□□ -0.2
UBP1-211ENST00000490112 MICALL2Q8IY33 904 aa13.82□□□□□ -0.2
UBP1-211ENST00000490112 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
UBP1-211ENST00000490112 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
UBP1-211ENST00000490112 GLIS2Q9BZE0 524 aaPredicted RBP13.82□□□□□ -0.2
UBP1-211ENST00000490112 MBIPQ9NS73 344 aa13.82□□□□□ -0.2
UBP1-211ENST00000490112 TAF1P21675 1872 aa13.81□□□□□ -0.2
UBP1-211ENST00000490112 DUOX1Q9NRD9 1551 aa13.81□□□□□ -0.2
UBP1-211ENST00000490112 ZNF853P0CG23 659 aa13.81□□□□□ -0.2
UBP1-211ENST00000490112 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
UBP1-211ENST00000490112 ZC3H12CQ9C0D7 883 aaKnown RBP13.81□□□□□ -0.2
UBP1-211ENST00000490112 PSMD14O00487 310 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
UBP1-211ENST00000490112 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
UBP1-211ENST00000490112 GPSM2P81274 684 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 CCDC152Q4G0S7 254 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
UBP1-211ENST00000490112 DBNDD1Q9H9R9 158 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 POLLQ9UGP5 575 aa13.8□□□□□ -0.2
UBP1-211ENST00000490112 G3V3G9 751 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 ECE2O60344 883 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 NOGQ13253 232 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
UBP1-211ENST00000490112 TBC1D16Q8TBP0 767 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms