RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 ADAMTSL1Q8N6G6 1762 aa22.73■■□□□ 1.23
SRM-206ENST00000490101 ITGBL1O95965 494 aaPredicted RBP22.72■■□□□ 1.23
SRM-206ENST00000490101 LMOD1P29536 600 aaPredicted RBP22.72■■□□□ 1.23
SRM-206ENST00000490101 TRIM28Q13263 835 aaKnown RBP22.72■■□□□ 1.23
SRM-206ENST00000490101 AOC3Q16853 763 aa22.72■■□□□ 1.23
SRM-206ENST00000490101 CWF19L2Q2TBE0 894 aaKnown RBP22.72■■□□□ 1.23
SRM-206ENST00000490101 MAP1SQ66K74 1059 aaPredicted RBP22.72■■□□□ 1.23
SRM-206ENST00000490101 SH3TC1Q8TE82 1336 aa22.72■■□□□ 1.23
SRM-206ENST00000490101 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
SRM-206ENST00000490101 TMEM88BA6NKF7 163 aa22.7■■□□□ 1.22
SRM-206ENST00000490101 GCKRQ14397 625 aa22.7■■□□□ 1.22
SRM-206ENST00000490101 ISCA1Q9BUE6 129 aa22.7■■□□□ 1.22
SRM-206ENST00000490101 UTYO14607 1347 aa22.7■■□□□ 1.22
SRM-206ENST00000490101 LTBP1Q14766 1721 aa22.69■■□□□ 1.22
SRM-206ENST00000490101 GNAI2P04899 355 aa22.69■■□□□ 1.22
SRM-206ENST00000490101 UBTFL1P0CB47 393 aaPredicted RBP22.69■■□□□ 1.22
SRM-206ENST00000490101 EPS15P42566 896 aa22.69■■□□□ 1.22
SRM-206ENST00000490101 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
SRM-206ENST00000490101 CNTROBQ8N137 903 aa22.69■■□□□ 1.22
SRM-206ENST00000490101 CCDC191Q8NCU4 936 aa22.69■■□□□ 1.22
SRM-206ENST00000490101 CNTNAP1P78357 1384 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 ATP5J2-PTCD1G3V325 749 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 GRM8O00222 908 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 BBOX1O75936 387 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 SCNN1DP51172 638 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 SUPT20HQ8NEM7 779 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 C9orf78Q9NZ63 289 aaPredicted RBP22.68■■□□□ 1.22
SRM-206ENST00000490101 HDAC5Q9UQL6 1122 aa22.68■■□□□ 1.22
SRM-206ENST00000490101 TAF1P21675 1872 aa22.67■■□□□ 1.22
SRM-206ENST00000490101 HDAC1Q13547 482 aaPredicted RBP22.67■■□□□ 1.22
SRM-206ENST00000490101 GRAPQ13588 217 aa22.67■■□□□ 1.22
SRM-206ENST00000490101 SP8Q8IXZ3 490 aa22.67■■□□□ 1.22
SRM-206ENST00000490101 MPNDQ8N594 471 aa22.67■■□□□ 1.22
SRM-206ENST00000490101 GRAPLQ8TC17 118 aaPredicted RBP22.67■■□□□ 1.22
SRM-206ENST00000490101 C1orf115Q9H7X2 142 aa22.67■■□□□ 1.22
SRM-206ENST00000490101 CWC25Q9NXE8 425 aaPredicted RBP22.67■■□□□ 1.22
SRM-206ENST00000490101 NBPF7P0C2Y1 421 aaPredicted RBP22.66■■□□□ 1.22
SRM-206ENST00000490101 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
SRM-206ENST00000490101 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
SRM-206ENST00000490101 TNS4Q8IZW8 715 aa22.66■■□□□ 1.22
SRM-206ENST00000490101 FAM89AQ96GI7 184 aa22.66■■□□□ 1.22
SRM-206ENST00000490101 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
SRM-206ENST00000490101 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
SRM-206ENST00000490101 ANKRD44Q8N8A2 993 aa22.65■■□□□ 1.22
SRM-206ENST00000490101 RTFDC1Q9BY42 306 aaPredicted RBP22.65■■□□□ 1.22
SRM-206ENST00000490101 ZNRF3Q9ULT6 936 aa22.65■■□□□ 1.22
SRM-206ENST00000490101 IGHDP01880 384 aa22.64■■□□□ 1.21
SRM-206ENST00000490101 CENPQQ7L2Z9 268 aaPredicted RBP22.64■■□□□ 1.21
SRM-206ENST00000490101 VPS33BQ9H267 617 aa22.64■■□□□ 1.21
SRM-206ENST00000490101 H7C1W4 665 aa22.63■■□□□ 1.21
SRM-206ENST00000490101 CAPN15O75808 1086 aa22.63■■□□□ 1.21
SRM-206ENST00000490101 VEGFBP49765 207 aa22.63■■□□□ 1.21
SRM-206ENST00000490101 CXCL9Q07325 125 aa22.63■■□□□ 1.21
SRM-206ENST00000490101 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
SRM-206ENST00000490101 SIRT2Q8IXJ6 389 aa22.63■■□□□ 1.21
SRM-206ENST00000490101 LRRFIP2Q9Y608 721 aaKnown RBP22.63■■□□□ 1.21
SRM-206ENST00000490101 CASP7P55210 303 aa22.62■■□□□ 1.21
SRM-206ENST00000490101 KIAA2012Q0VF49 1180 aa22.62■■□□□ 1.21
SRM-206ENST00000490101 ABT1Q9ULW3 272 aaKnown RBP22.62■■□□□ 1.21
SRM-206ENST00000490101 RAD17O75943 681 aa22.61■■□□□ 1.21
SRM-206ENST00000490101 FMR1Q06787 632 aaKnown RBP eCLIP22.61■■□□□ 1.21
SRM-206ENST00000490101 USP50Q70EL3 339 aaPredicted RBP22.61■■□□□ 1.21
SRM-206ENST00000490101 GPRC5DQ9NZD1 345 aa22.61■■□□□ 1.21
SRM-206ENST00000490101 GMPSP49915 693 aaPredicted RBP22.6■■□□□ 1.21
SRM-206ENST00000490101 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
SRM-206ENST00000490101 CIAPIN1Q6FI81 312 aa22.6■■□□□ 1.21
SRM-206ENST00000490101 TMC4Q7Z404 712 aa22.6■■□□□ 1.21
SRM-206ENST00000490101 CELF1Q92879 486 aaKnown RBP22.6■■□□□ 1.21
SRM-206ENST00000490101 ADARB2Q9NS39 739 aaKnown RBP22.6■■□□□ 1.21
SRM-206ENST00000490101 DUOX1Q9NRD9 1551 aa22.59■■□□□ 1.21
SRM-206ENST00000490101 IRS4O14654 1257 aaPredicted RBP22.59■■□□□ 1.21
SRM-206ENST00000490101 PCCAP05165 728 aaPredicted RBP22.59■■□□□ 1.21
SRM-206ENST00000490101 DEFB115Q30KQ5 88 aa22.59■■□□□ 1.21
SRM-206ENST00000490101 UBE3BQ7Z3V4 1068 aa22.59■■□□□ 1.21
SRM-206ENST00000490101 SUCLG2Q96I99 432 aa22.59■■□□□ 1.21
SRM-206ENST00000490101 LRRC37AA6NMS7 1700 aa22.59■■□□□ 1.21
SRM-206ENST00000490101 TRAF5O00463 557 aa22.58■■□□□ 1.21
SRM-206ENST00000490101 FOXN1O15353 648 aa22.58■■□□□ 1.21
SRM-206ENST00000490101 MTX1Q13505 466 aa22.58■■□□□ 1.21
SRM-206ENST00000490101 SF3B3Q15393 1217 aaKnown RBP22.58■■□□□ 1.21
SRM-206ENST00000490101 KAZALD1Q96I82 304 aa22.58■■□□□ 1.21
SRM-206ENST00000490101 NSFL1CQ9UNZ2 370 aaKnown RBP22.58■■□□□ 1.21
SRM-206ENST00000490101 COL4A1P02462 1669 aa22.58■■□□□ 1.2
SRM-206ENST00000490101 RASSF10A6NK89 507 aa22.57■■□□□ 1.2
SRM-206ENST00000490101 HMMRO75330 724 aa22.57■■□□□ 1.2
SRM-206ENST00000490101 TNIP1Q15025 636 aa22.57■■□□□ 1.2
SRM-206ENST00000490101 ZBTB38Q8NAP3 1195 aaPredicted RBP22.57■■□□□ 1.2
SRM-206ENST00000490101 AIDAQ96BJ3 306 aa22.57■■□□□ 1.2
SRM-206ENST00000490101 PAXIP1Q6ZW49 1069 aaPredicted RBP22.56■■□□□ 1.2
SRM-206ENST00000490101 YDJCA8MPS7 323 aa22.55■■□□□ 1.2
SRM-206ENST00000490101 C6orf229H3BNL8 230 aa22.55■■□□□ 1.2
SRM-206ENST00000490101 RIMBP2O15034 1052 aa22.55■■□□□ 1.2
SRM-206ENST00000490101 WASHC4Q2M389 1173 aa22.55■■□□□ 1.2
SRM-206ENST00000490101 SMC5Q8IY18 1101 aa22.55■■□□□ 1.2
SRM-206ENST00000490101 JARID2Q92833 1246 aaPredicted RBP22.55■■□□□ 1.2
SRM-206ENST00000490101 CDHR2Q9BYE9 1310 aa22.55■■□□□ 1.2
SRM-206ENST00000490101 GPSM2P81274 684 aa22.54■■□□□ 1.2
SRM-206ENST00000490101 GRM1Q13255 1194 aa22.54■■□□□ 1.2
SRM-206ENST00000490101 SSH3Q8TE77 659 aa22.54■■□□□ 1.2
SRM-206ENST00000490101 BICC1Q9H694 974 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms