RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 MRE11P49959 708 aa11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 HSPA2P54652 639 aa11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 GCKRQ14397 625 aa11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 COPS6Q7L5N1 327 aa11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 INTS4Q96HW7 963 aaKnown RBP11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 LSG1Q9H089 658 aaKnown RBP11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 SOS2Q07890 1332 aaPredicted RBP11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
RAB3GAP1-205ENST00000489858 KLHL40Q2TBA0 621 aa11.54□□□□□ -0.56
RAB3GAP1-205ENST00000489858 TOM1L2Q6ZVM7 507 aa11.54□□□□□ -0.56
RAB3GAP1-205ENST00000489858 ZGPATQ8N5A5 531 aaKnown RBP11.54□□□□□ -0.56
RAB3GAP1-205ENST00000489858 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
RAB3GAP1-205ENST00000489858 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
RAB3GAP1-205ENST00000489858 TJP1Q07157 1748 aa11.54□□□□□ -0.56
RAB3GAP1-205ENST00000489858 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
RAB3GAP1-205ENST00000489858 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
RAB3GAP1-205ENST00000489858 DDX12PQ92771 950 aa11.53□□□□□ -0.56
RAB3GAP1-205ENST00000489858 TNS2Q63HR2 1409 aa11.52□□□□□ -0.56
RAB3GAP1-205ENST00000489858 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.56
RAB3GAP1-205ENST00000489858 SASH1O94885 1247 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 MCTP1Q6DN14 999 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CWC27Q6UX04 472 aaKnown RBP11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 PLBD2Q8NHP8 589 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CARD10Q9BWT7 1032 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 IL25Q9H293 177 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 DDX49Q9Y6V7 483 aaKnown RBP11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
RAB3GAP1-205ENST00000489858 IL2RBP14784 551 aa11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ARXQ96QS3 562 aa11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 SIL1Q9H173 461 aa11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 GRPEL1Q9HAV7 217 aa11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 COPRSQ9NQ92 184 aa11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 USP16Q9Y5T5 823 aa11.51□□□□□ -0.57
RAB3GAP1-205ENST00000489858 BRD1O95696 1058 aa11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 XRCC6P12956 609 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 RABL6Q3YEC7 729 aaPredicted RBP11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 NOL8Q76FK4 1167 aaKnown RBP11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 UBE3BQ7Z3V4 1068 aa11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 EAF2Q96CJ1 260 aaPredicted RBP11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CCDC171Q6TFL3 1326 aa11.5□□□□□ -0.57
RAB3GAP1-205ENST00000489858 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 PKP1Q13835 747 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 EPHA10Q5JZY3 1008 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 FAM43AQ8N2R8 423 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 KCNB2Q92953 911 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 TTC14Q96N46 770 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 WDR33Q9C0J8 1336 aaKnown RBP11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
RAB3GAP1-205ENST00000489858 A0A087WZG4 1122 aa11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 MBD3O95983 291 aa11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 KCNJ4P48050 445 aa11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 RFX5P48382 616 aaPredicted RBP11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 NMIQ13287 307 aaPredicted RBP11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ZDHHC9Q9Y397 364 aa11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ZNF335Q9H4Z2 1342 aaPredicted RBP11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
RAB3GAP1-205ENST00000489858 LRP6O75581 1613 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 JCADQ9P266 1359 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ATP5JP18859 108 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 AK2P54819 239 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CASP7P55210 303 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 JAKMIP1Q96N16 626 aaKnown RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 LIMCH1Q9UPQ0 1083 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 RBM8AQ9Y5S9 174 aaKnown RBP11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CYP46A1Q9Y6A2 500 aa11.47□□□□□ -0.57
RAB3GAP1-205ENST00000489858 WNK3Q9BYP7 1800 aa11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 RPAP1Q9BWH6 1393 aaPredicted RBP11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ATP5J2-PTCD1G3V325 749 aa11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 H7C1W4 665 aa11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 PTCD1O75127 700 aaKnown RBP11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 CASTP20810 708 aaKnown RBP11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 EVA1CP58658 441 aa11.46□□□□□ -0.57
RAB3GAP1-205ENST00000489858 ZNF445P59923 1031 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms