RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 EIF3CLB5ME19 914 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ERC2O15083 957 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 HOXA2O43364 376 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 CAVIN2O95810 425 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 DNAJB2P25686 324 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 EXOSC9Q06265 439 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 SMC1AQ14683 1233 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ZRSR1Q15695 479 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 PROX2Q3B8N5 592 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ARHGAP29Q52LW3 1261 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 SULF1Q8IWU6 871 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 CCAR2Q8N163 923 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 EIF3CQ99613 913 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 TFIP11Q9UBB9 837 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 CFDP1Q9UEE9 299 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ADAM21Q9UKJ8 722 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 EXOC6BQ9Y2D4 811 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.58□□□□□ -1.527e-10■□□□□ 9.3
SNRNP40-206ENST00000489853 IL16Q14005 1332 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 NOS1P29475 1434 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 PPIP5K1Q6PFW1 1433 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 IQSEC2Q5JU85 1478 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 EIF2AK4Q9P2K8 1649 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 NPHP1O15259 732 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 CSB-PGBD3P0DP91 1061 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 FDX1P10109 184 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 OAS2P29728 719 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ANAPC15P60006 121 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 RGL3Q3MIN7 710 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 LRCH2Q5VUJ6 765 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 TICAM2Q86XR7 235 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 TDRD7Q8NHU6 1098 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 PRR7Q8TB68 274 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 UBXN4Q92575 508 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 IL17RAQ96F46 866 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 SRRTQ9BXP5 876 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 SRCIN1Q9C0H9 1055 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ZBTB3Q9H5J0 574 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 PRM3Q9NNZ6 103 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ZCCHC17Q9NP64 241 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 ORC3Q9UBD5 711 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 CLIP2Q9UDT6 1046 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 CNPY2Q9Y2B0 182 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 RTL1A6NKG5 1358 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 AATKQ6ZMQ8 1374 aa5.58□□□□□ -1.52
SNRNP40-206ENST00000489853 A0A087WUV0 522 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 CFAP99D6REC4 459 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 SOCS7O14512 581 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 ZSCAN22P10073 491 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 SKILP12757 684 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 CASTP20810 708 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 USP8P40818 1118 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 LMAN1P49257 510 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 MAP3K11Q16584 847 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 DNAJC21Q5F1R6 531 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 EFCAB13Q8IY85 973 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 RNF217Q8TC41 542 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 ARHGAP45Q92619 1136 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 SYMPKQ92797 1274 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 TATDN2Q93075 761 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 IRX2Q9BZI1 471 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 FAM107BQ9H098 131 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 ZSCAN16Q9H4T2 348 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 CBX8Q9HC52 389 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 BSDC1Q9NW68 430 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 MRVI1Q9Y6F6 885 aa5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 ZCCHC11Q5TAX3 1644 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-206ENST00000489853 A2MP01023 1474 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 USP27XA6NNY8 438 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 TBC1D8O95759 1140 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 TYRO3Q06418 890 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 C11orf91Q3C1V1 193 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 CCDC158Q5M9N0 1113 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SARM1Q6SZW1 724 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SIRT2Q8IXJ6 389 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 TBC1D22AQ8WUA7 517 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 STAG1Q8WVM7 1258 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 WNT2BQ93097 391 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 MRFAP1L1Q96HT8 127 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SGSM3Q96HU1 749 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 ALG2Q9H553 416 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 ABCC11Q96J66 1382 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 TMEM88BA6NKF7 163 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 EFCAB8A8MWE9 144 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SGSM2O43147 1006 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SLC10A3P09131 477 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SDSP20132 328 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 KCNA1Q09470 495 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 SNW1Q13573 536 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 DHX8Q14562 1220 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 CCDC144BQ3MJ40 725 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 TMED8Q6PL24 325 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 LUZP1Q86V48 1076 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 CCDC144CPQ8IYA2 1237 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 MRPL50Q8N5N7 158 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 MSL3Q8N5Y2 521 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 DNAAF4Q8WXU2 420 aa5.56□□□□□ -1.52
SNRNP40-206ENST00000489853 CFAP53Q96M91 514 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms