RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SYT1P21579 422 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 RPS6KB1P23443 525 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 TRIM44Q96DX7 344 aaPredicted RBP17.84■□□□□ 0.45
COL9A1-208ENST00000489611 ZBTB3Q9H5J0 574 aa17.84■□□□□ 0.45
COL9A1-208ENST00000489611 ZNF609O15014 1411 aa17.83■□□□□ 0.45
COL9A1-208ENST00000489611 LRSAM1Q6UWE0 723 aa17.83■□□□□ 0.44
COL9A1-208ENST00000489611 ABCC12Q96J65 1359 aa17.83■□□□□ 0.44
COL9A1-208ENST00000489611 LETM1O95202 739 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-208ENST00000489611 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
COL9A1-208ENST00000489611 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-208ENST00000489611 PPP1R9BQ96SB3 815 aa17.82■□□□□ 0.44
COL9A1-208ENST00000489611 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
COL9A1-208ENST00000489611 F13A1P00488 732 aa17.82■□□□□ 0.44
COL9A1-208ENST00000489611 CHMP4CQ96CF2 233 aa17.82■□□□□ 0.44
COL9A1-208ENST00000489611 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
COL9A1-208ENST00000489611 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
COL9A1-208ENST00000489611 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
COL9A1-208ENST00000489611 GJB2P29033 226 aa17.81■□□□□ 0.44
COL9A1-208ENST00000489611 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
COL9A1-208ENST00000489611 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
COL9A1-208ENST00000489611 DNAJC2Q99543 621 aaKnown RBP17.81■□□□□ 0.44
COL9A1-208ENST00000489611 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
COL9A1-208ENST00000489611 ME3Q16798 604 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 FOXD4L5Q5VV16 416 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-208ENST00000489611 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 ZNF589Q86UQ0 364 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-208ENST00000489611 CCDC83Q8IWF9 413 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 FOXD4L4Q8WXT5 416 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-208ENST00000489611 DSCC1Q9BVC3 393 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 MAP3K15Q6ZN16 1313 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 ANKRD36CQ5JPF3 1778 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
COL9A1-208ENST00000489611 NEUROD6Q96NK8 337 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 RTN4Q9NQC3 1192 aaKnown RBP17.8■□□□□ 0.44
COL9A1-208ENST00000489611 TMEM63CQ9P1W3 806 aa17.8■□□□□ 0.44
COL9A1-208ENST00000489611 UBE2HP62256 183 aa17.79■□□□□ 0.44
COL9A1-208ENST00000489611 NEK1Q96PY6 1258 aa17.79■□□□□ 0.44
COL9A1-208ENST00000489611 CSF1RP07333 972 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 ZFYP08048 801 aaPredicted RBP17.78■□□□□ 0.44
COL9A1-208ENST00000489611 CPA1P15085 419 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 HS1BP3Q53T59 392 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 CCDC158Q5M9N0 1113 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 USP48Q86UV5 1035 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 A0A1B0GUL7 405 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 TCHHQ07283 1943 aa17.78■□□□□ 0.44
COL9A1-208ENST00000489611 LARGE1O95461 756 aa17.77■□□□□ 0.44
COL9A1-208ENST00000489611 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
COL9A1-208ENST00000489611 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
COL9A1-208ENST00000489611 ZMYM1Q5SVZ6 1142 aa17.77■□□□□ 0.44
COL9A1-208ENST00000489611 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
COL9A1-208ENST00000489611 ZNF330Q9Y3S2 320 aaPredicted RBP17.77■□□□□ 0.44
COL9A1-208ENST00000489611 CYP19A1P11511 503 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-208ENST00000489611 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
COL9A1-208ENST00000489611 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
COL9A1-208ENST00000489611 EDC3Q96F86 508 aaKnown RBP17.76■□□□□ 0.43
COL9A1-208ENST00000489611 MYH3P11055 1940 aa17.76■□□□□ 0.43
COL9A1-208ENST00000489611 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
COL9A1-208ENST00000489611 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
COL9A1-208ENST00000489611 SIK1P57059 783 aa17.76■□□□□ 0.43
COL9A1-208ENST00000489611 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
COL9A1-208ENST00000489611 AK7Q96M32 723 aa17.76■□□□□ 0.43
COL9A1-208ENST00000489611 GOLIM4O00461 696 aa17.75■□□□□ 0.43
COL9A1-208ENST00000489611 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
COL9A1-208ENST00000489611 CLCN1P35523 988 aa17.75■□□□□ 0.43
COL9A1-208ENST00000489611 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
COL9A1-208ENST00000489611 TIMM10P62072 90 aa17.75■□□□□ 0.43
COL9A1-208ENST00000489611 TOB2Q14106 344 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-208ENST00000489611 TAF7LQ5H9L4 462 aa17.75■□□□□ 0.43
COL9A1-208ENST00000489611 SYCE3A1L190 88 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 LRRC24Q50LG9 513 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 CCDC183Q5T5S1 534 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
COL9A1-208ENST00000489611 LLPHQ9BRT6 129 aaKnown RBP17.74■□□□□ 0.43
COL9A1-208ENST00000489611 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
COL9A1-208ENST00000489611 CTNNA3Q9UI47 895 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 ZBTB1Q9Y2K1 713 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
COL9A1-208ENST00000489611 ELP1O95163 1332 aa17.73■□□□□ 0.43
COL9A1-208ENST00000489611 ESPNB1AK53 854 aa17.73■□□□□ 0.43
COL9A1-208ENST00000489611 CYP21A2P08686 494 aa17.73■□□□□ 0.43
COL9A1-208ENST00000489611 IL6STP40189 918 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-208ENST00000489611 ITPK1Q13572 414 aa17.73■□□□□ 0.43
COL9A1-208ENST00000489611 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-208ENST00000489611 LARP6Q9BRS8 491 aaKnown RBP17.73■□□□□ 0.43
COL9A1-208ENST00000489611 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
COL9A1-208ENST00000489611 ST3GAL1Q11201 340 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 TTC39AQ5SRH9 613 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 ZNF772Q68DY9 489 aaPredicted RBP17.72■□□□□ 0.43
COL9A1-208ENST00000489611 DHX32Q7L7V1 743 aaKnown RBP17.72■□□□□ 0.43
COL9A1-208ENST00000489611 RBSNQ9H1K0 784 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
COL9A1-208ENST00000489611 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 KCNQ4P56696 695 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 KRT85P78386 507 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 FBXL16Q8N461 479 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms