RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 CA12O43570 354 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 GNAI1P63096 354 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 SAPCD2Q86UD0 394 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 MICALL2Q8IY33 904 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 TBC1D16Q8TBP0 767 aa15.24■□□□□ 0.03
ACTN4-206ENST00000489451 CNOT7Q9UIV1 285 aaKnown RBP15.24■□□□□ 0.03
ACTN4-206ENST00000489451 SPEF2Q9C093 1822 aa15.23■□□□□ 0.03
ACTN4-206ENST00000489451 AOC2O75106 756 aa15.23■□□□□ 0.03
ACTN4-206ENST00000489451 CELF2O95319 508 aaKnown RBP15.23■□□□□ 0.03
ACTN4-206ENST00000489451 RPS8P62241 208 aaKnown RBP15.23■□□□□ 0.03
ACTN4-206ENST00000489451 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
ACTN4-206ENST00000489451 TNIP1Q15025 636 aa15.23■□□□□ 0.03
ACTN4-206ENST00000489451 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
ACTN4-206ENST00000489451 BCL2L13Q9BXK5 485 aa15.23■□□□□ 0.03
ACTN4-206ENST00000489451 MYH3P11055 1940 aa15.22■□□□□ 0.03
ACTN4-206ENST00000489451 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
ACTN4-206ENST00000489451 ECE2O60344 883 aa15.22■□□□□ 0.03
ACTN4-206ENST00000489451 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
ACTN4-206ENST00000489451 DOK7Q18PE1 504 aa15.22■□□□□ 0.03
ACTN4-206ENST00000489451 ZC3H15Q8WU90 426 aaKnown RBP15.22■□□□□ 0.03
ACTN4-206ENST00000489451 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
ACTN4-206ENST00000489451 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
ACTN4-206ENST00000489451 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
ACTN4-206ENST00000489451 IGKV5-2P06315 115 aa15.21■□□□□ 0.03
ACTN4-206ENST00000489451 CCDC191Q8NCU4 936 aa15.21■□□□□ 0.03
ACTN4-206ENST00000489451 DPF2Q92785 391 aa15.21■□□□□ 0.03
ACTN4-206ENST00000489451 CCDC85AQ96PX6 553 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-206ENST00000489451 WTIPA6NIX2 430 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-206ENST00000489451 ZIC5Q96T25 663 aa15.2■□□□□ 0.02
ACTN4-206ENST00000489451 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-206ENST00000489451 ASTN2O75129 1339 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-206ENST00000489451 ZNF609O15014 1411 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 PDE8AO60658 829 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 MAP2K2P36507 400 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
ACTN4-206ENST00000489451 TBC1D10BQ4KMP7 808 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-206ENST00000489451 CDC37L1Q7L3B6 337 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 G2E3Q7L622 706 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
ACTN4-206ENST00000489451 H7C1D1 291 aa15.18■□□□□ 0.02
ACTN4-206ENST00000489451 UFL1O94874 794 aa15.18■□□□□ 0.02
ACTN4-206ENST00000489451 VIL1P09327 827 aaKnown RBP15.18■□□□□ 0.02
ACTN4-206ENST00000489451 CCDC30Q5VVM6 783 aa15.18■□□□□ 0.02
ACTN4-206ENST00000489451 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
ACTN4-206ENST00000489451 ZNF408Q9H9D4 720 aa15.18■□□□□ 0.02
ACTN4-206ENST00000489451 PI4KAP2A4QPH2 592 aa15.17■□□□□ 0.02
ACTN4-206ENST00000489451 ADM5C9JUS6 153 aa15.17■□□□□ 0.02
ACTN4-206ENST00000489451 RPS12P25398 132 aaKnown RBP15.17■□□□□ 0.02
ACTN4-206ENST00000489451 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
ACTN4-206ENST00000489451 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
ACTN4-206ENST00000489451 PI4KAP1Q8N8J0 262 aa15.17■□□□□ 0.02
ACTN4-206ENST00000489451 EYA3Q99504 573 aa15.17■□□□□ 0.02
ACTN4-206ENST00000489451 CTSWP56202 376 aa15.16■□□□□ 0.02
ACTN4-206ENST00000489451 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
ACTN4-206ENST00000489451 HABP4Q5JVS0 413 aaKnown RBP15.16■□□□□ 0.02
ACTN4-206ENST00000489451 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
ACTN4-206ENST00000489451 WWC1Q8IX03 1113 aa15.16■□□□□ 0.02
ACTN4-206ENST00000489451 GGA1Q9UJY5 639 aa15.16■□□□□ 0.02
ACTN4-206ENST00000489451 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
ACTN4-206ENST00000489451 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
ACTN4-206ENST00000489451 TTLL11Q8NHH1 800 aa15.15■□□□□ 0.02
ACTN4-206ENST00000489451 GMLQ99445 158 aa15.15■□□□□ 0.02
ACTN4-206ENST00000489451 ZC3H12CQ9C0D7 883 aaKnown RBP15.15■□□□□ 0.02
ACTN4-206ENST00000489451 GREM2Q9H772 168 aa15.15■□□□□ 0.02
ACTN4-206ENST00000489451 ANKIB1Q9P2G1 1089 aa15.15■□□□□ 0.02
ACTN4-206ENST00000489451 A0A1B0GUL6 1792 aa15.14■□□□□ 0.01
ACTN4-206ENST00000489451 NEURL1BA8MQ27 555 aa15.14■□□□□ 0.01
ACTN4-206ENST00000489451 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-206ENST00000489451 DDX58O95786 925 aaKnown RBP15.14■□□□□ 0.01
ACTN4-206ENST00000489451 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-206ENST00000489451 CASP7P55210 303 aa15.14■□□□□ 0.01
ACTN4-206ENST00000489451 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-206ENST00000489451 KRT26Q7Z3Y9 468 aa15.14■□□□□ 0.01
ACTN4-206ENST00000489451 GGA3Q9NZ52 723 aa15.14■□□□□ 0.01
ACTN4-206ENST00000489451 XDHP47989 1333 aa15.14■□□□□ 0.01
ACTN4-206ENST00000489451 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
ACTN4-206ENST00000489451 RSBN1LQ6PCB5 846 aaPredicted RBP15.13■□□□□ 0.01
ACTN4-206ENST00000489451 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
ACTN4-206ENST00000489451 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
ACTN4-206ENST00000489451 H7C1W4 665 aa15.12■□□□□ 0.01
ACTN4-206ENST00000489451 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
ACTN4-206ENST00000489451 HUNKP57058 714 aa15.12■□□□□ 0.01
ACTN4-206ENST00000489451 GBA2Q9HCG7 927 aaPredicted RBP15.12■□□□□ 0.01
ACTN4-206ENST00000489451 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
ACTN4-206ENST00000489451 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
ACTN4-206ENST00000489451 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
ACTN4-206ENST00000489451 ATP2B4P23634 1241 aa15.11■□□□□ 0.01
ACTN4-206ENST00000489451 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
ACTN4-206ENST00000489451 AGBL3Q8NEM8 1001 aa15.11■□□□□ 0.01
ACTN4-206ENST00000489451 MXD3Q9BW11 206 aa15.11■□□□□ 0.01
ACTN4-206ENST00000489451 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
ACTN4-206ENST00000489451 IL16Q14005 1332 aa15.11■□□□□ 0.01
ACTN4-206ENST00000489451 SLC4A2P04920 1241 aa15.1■□□□□ 0.01
ACTN4-206ENST00000489451 KLRK1P26718 216 aa15.1■□□□□ 0.01
ACTN4-206ENST00000489451 FLIIQ13045 1269 aa15.1■□□□□ 0.01
ACTN4-206ENST00000489451 UBE3BQ7Z3V4 1068 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms