RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 NOGQ13253 232 aa15.41■□□□□ 0.06
SFXN3-207ENST00000489434 DOK7Q18PE1 504 aa15.41■□□□□ 0.06
SFXN3-207ENST00000489434 CCDC152Q4G0S7 254 aa15.41■□□□□ 0.06
SFXN3-207ENST00000489434 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
SFXN3-207ENST00000489434 SAMD7Q7Z3H4 446 aa15.41■□□□□ 0.06
SFXN3-207ENST00000489434 TBC1D16Q8TBP0 767 aa15.41■□□□□ 0.06
SFXN3-207ENST00000489434 SHTN1A0MZ66 631 aa15.4■□□□□ 0.06
SFXN3-207ENST00000489434 UFL1O94874 794 aa15.4■□□□□ 0.06
SFXN3-207ENST00000489434 CCDC191Q8NCU4 936 aa15.4■□□□□ 0.06
SFXN3-207ENST00000489434 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
SFXN3-207ENST00000489434 POLR2AP24928 1970 aaKnown RBP15.39■□□□□ 0.05
SFXN3-207ENST00000489434 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
SFXN3-207ENST00000489434 APAF1O14727 1248 aa15.39■□□□□ 0.05
SFXN3-207ENST00000489434 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
SFXN3-207ENST00000489434 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
SFXN3-207ENST00000489434 C2orf69Q8N8R5 385 aa15.39■□□□□ 0.05
SFXN3-207ENST00000489434 MYD88Q99836 296 aa15.39■□□□□ 0.05
SFXN3-207ENST00000489434 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
SFXN3-207ENST00000489434 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
SFXN3-207ENST00000489434 PODXL2Q9NZ53 605 aa15.39■□□□□ 0.05
SFXN3-207ENST00000489434 TSKSQ9UJT2 592 aa15.39■□□□□ 0.05
SFXN3-207ENST00000489434 PDE8AO60658 829 aa15.38■□□□□ 0.05
SFXN3-207ENST00000489434 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
SFXN3-207ENST00000489434 CCDC30Q5VVM6 783 aa15.38■□□□□ 0.05
SFXN3-207ENST00000489434 SULF1Q8IWU6 871 aa15.38■□□□□ 0.05
SFXN3-207ENST00000489434 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
SFXN3-207ENST00000489434 CCDC85CA6NKD9 419 aa15.37■□□□□ 0.05
SFXN3-207ENST00000489434 VIL1P09327 827 aaKnown RBP15.37■□□□□ 0.05
SFXN3-207ENST00000489434 KIF4BQ2VIQ3 1234 aa15.37■□□□□ 0.05
SFXN3-207ENST00000489434 CCDC102AQ96A19 550 aa15.37■□□□□ 0.05
SFXN3-207ENST00000489434 GBA2Q9HCG7 927 aaPredicted RBP15.37■□□□□ 0.05
SFXN3-207ENST00000489434 SEC31BQ9NQW1 1179 aa15.37■□□□□ 0.05
SFXN3-207ENST00000489434 KCNQ5Q9NR82 932 aa15.37■□□□□ 0.05
SFXN3-207ENST00000489434 RTL9Q8NET4 1388 aa15.36■□□□□ 0.05
SFXN3-207ENST00000489434 RGMBQ6NW40 437 aa15.36■□□□□ 0.05
SFXN3-207ENST00000489434 ANKRD18AQ8IVF6 992 aa15.36■□□□□ 0.05
SFXN3-207ENST00000489434 METTL22Q9BUU2 404 aaPredicted RBP15.36■□□□□ 0.05
SFXN3-207ENST00000489434 CASP8AP2Q9UKL3 1982 aa15.36■□□□□ 0.05
SFXN3-207ENST00000489434 XDHP47989 1333 aa15.36■□□□□ 0.05
SFXN3-207ENST00000489434 EGFRP00533 1210 aa15.35■□□□□ 0.05
SFXN3-207ENST00000489434 NEXNQ0ZGT2 675 aa15.35■□□□□ 0.05
SFXN3-207ENST00000489434 AGBL3Q8NEM8 1001 aa15.35■□□□□ 0.05
SFXN3-207ENST00000489434 CDC5LQ99459 802 aaKnown RBP15.35■□□□□ 0.05
SFXN3-207ENST00000489434 STK31Q9BXU1 1019 aa15.35■□□□□ 0.05
SFXN3-207ENST00000489434 ADM5C9JUS6 153 aa15.34■□□□□ 0.05
SFXN3-207ENST00000489434 ZNF157P51786 506 aaPredicted RBP15.34■□□□□ 0.05
SFXN3-207ENST00000489434 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
SFXN3-207ENST00000489434 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
SFXN3-207ENST00000489434 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
SFXN3-207ENST00000489434 SCN9AQ15858 1988 aa15.33■□□□□ 0.05
SFXN3-207ENST00000489434 ATP2B4P23634 1241 aa15.33■□□□□ 0.04
SFXN3-207ENST00000489434 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
SFXN3-207ENST00000489434 MAP3K2Q9Y2U5 619 aa15.33■□□□□ 0.04
SFXN3-207ENST00000489434 COL4A1P02462 1669 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 USP17L8P0C7I0 530 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 CTSWP56202 376 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 ZNF280AP59817 542 aaPredicted RBP15.32■□□□□ 0.04
SFXN3-207ENST00000489434 MLLT1Q03111 559 aaPredicted RBP15.32■□□□□ 0.04
SFXN3-207ENST00000489434 DGKZQ13574 1117 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 FAM161AQ3B820 660 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 DLK2Q6UY11 383 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 KSR2Q6VAB6 950 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 JARID2Q92833 1246 aaPredicted RBP15.32■□□□□ 0.04
SFXN3-207ENST00000489434 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 SAGE1Q9NXZ1 904 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 ZNF609O15014 1411 aa15.32■□□□□ 0.04
SFXN3-207ENST00000489434 PI4KAP2A4QPH2 592 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 SCARF1Q14162 830 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 PI4KAP1Q8N8J0 262 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 CDCA5Q96FF9 252 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
SFXN3-207ENST00000489434 FAM155AB1AL88 458 aaPredicted RBP15.3■□□□□ 0.04
SFXN3-207ENST00000489434 FKBP1BP68106 108 aa15.3■□□□□ 0.04
SFXN3-207ENST00000489434 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
SFXN3-207ENST00000489434 ANGEL2Q5VTE6 544 aaKnown RBP15.3■□□□□ 0.04
SFXN3-207ENST00000489434 REM2Q8IYK8 340 aaPredicted RBP15.3■□□□□ 0.04
SFXN3-207ENST00000489434 OGFOD1Q8N543 542 aa15.3■□□□□ 0.04
SFXN3-207ENST00000489434 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
SFXN3-207ENST00000489434 BSDC1Q9NW68 430 aaPredicted RBP15.3■□□□□ 0.04
SFXN3-207ENST00000489434 AKAP11Q9UKA4 1901 aa15.3■□□□□ 0.04
SFXN3-207ENST00000489434 MYH3P11055 1940 aa15.29■□□□□ 0.04
SFXN3-207ENST00000489434 PSME4Q14997 1843 aa15.29■□□□□ 0.04
SFXN3-207ENST00000489434 PITPNM2Q9BZ72 1349 aa15.29■□□□□ 0.04
SFXN3-207ENST00000489434 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
SFXN3-207ENST00000489434 MED23Q9ULK4 1368 aa15.28■□□□□ 0.04
SFXN3-207ENST00000489434 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-207ENST00000489434 SLC10A3P09131 477 aa15.28■□□□□ 0.04
SFXN3-207ENST00000489434 RGS19P49795 217 aa15.28■□□□□ 0.04
SFXN3-207ENST00000489434 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
SFXN3-207ENST00000489434 GMLQ99445 158 aa15.28■□□□□ 0.04
SFXN3-207ENST00000489434 GREM2Q9H772 168 aa15.28■□□□□ 0.04
SFXN3-207ENST00000489434 MYO3BQ8WXR4 1341 aa15.27■□□□□ 0.04
SFXN3-207ENST00000489434 TRPA1O75762 1119 aa15.27■□□□□ 0.04
SFXN3-207ENST00000489434 IGKV5-2P06315 115 aa15.27■□□□□ 0.04
SFXN3-207ENST00000489434 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
SFXN3-207ENST00000489434 UBE3BQ7Z3V4 1068 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms