RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 Q6ZUG5 572 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 C14orf37Q86TY3 774 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 C5P01031 1676 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 KIF20AO95235 890 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 C16orf45Q96MC5 204 aaPredicted RBP12.91□□□□□ -0.34
NEB-215ENST00000489048 OGFRQ9NZT2 677 aa12.91□□□□□ -0.34
NEB-215ENST00000489048 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
NEB-215ENST00000489048 SCRN1Q12765 414 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 GCKRQ14397 625 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 LRRC8AQ8IWT6 810 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 CGNQ9P2M7 1197 aaKnown RBP12.9□□□□□ -0.34
NEB-215ENST00000489048 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 FER1L4A9Z1Z3 1794 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 H3BQV1 296 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 HMGB1P09429 215 aaKnown RBP12.9□□□□□ -0.34
NEB-215ENST00000489048 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 SIL1Q9H173 461 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 CTNNA3Q9UI47 895 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 DBNLQ9UJU6 430 aaKnown RBP12.9□□□□□ -0.34
NEB-215ENST00000489048 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
NEB-215ENST00000489048 GOLGA6L19H0YKK7 550 aa12.9□□□□□ -0.35
NEB-215ENST00000489048 CYP21A2P08686 494 aa12.9□□□□□ -0.35
NEB-215ENST00000489048 RABL6Q3YEC7 729 aaPredicted RBP12.9□□□□□ -0.35
NEB-215ENST00000489048 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.35
NEB-215ENST00000489048 HAUS7Q99871 368 aa12.9□□□□□ -0.35
NEB-215ENST00000489048 METTL22Q9BUU2 404 aaPredicted RBP12.9□□□□□ -0.35
NEB-215ENST00000489048 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 MCMDC2Q4G0Z9 681 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 C11orf57Q6ZUT1 292 aaPredicted RBP12.89□□□□□ -0.35
NEB-215ENST00000489048 NYAP1Q6ZVC0 841 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
NEB-215ENST00000489048 CCDC112Q8NEF3 446 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 ABCC6O95255 1503 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
NEB-215ENST00000489048 SNW1Q13573 536 aaKnown RBP12.89□□□□□ -0.35
NEB-215ENST00000489048 TPD52L1Q16890 204 aaPredicted RBP12.89□□□□□ -0.35
NEB-215ENST00000489048 RIC3Q7Z5B4 369 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 ENGASEQ8NFI3 743 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
NEB-215ENST00000489048 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
NEB-215ENST00000489048 CEP135Q66GS9 1140 aa12.88□□□□□ -0.35
NEB-215ENST00000489048 EDC3Q96F86 508 aaKnown RBP12.88□□□□□ -0.35
NEB-215ENST00000489048 GOLPH3LQ9H4A5 285 aa12.88□□□□□ -0.35
NEB-215ENST00000489048 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
NEB-215ENST00000489048 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
NEB-215ENST00000489048 ANO10Q9NW15 660 aa12.88□□□□□ -0.35
NEB-215ENST00000489048 SCN11AQ9UI33 1791 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 DHX32Q7L7V1 743 aaKnown RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 STRCQ7RTU9 1775 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 CCZ1BP86790 482 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 CCZ1P86791 482 aaPredicted RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 AIMP1Q12904 312 aaKnown RBP12.87□□□□□ -0.35
NEB-215ENST00000489048 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
NEB-215ENST00000489048 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 GCP02774 474 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 TFCP2Q12800 502 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 SETD1BQ9UPS6 1966 aaKnown RBP12.86□□□□□ -0.35
NEB-215ENST00000489048 PSME1Q06323 249 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 GABPB1Q06547 395 aaPredicted RBP12.86□□□□□ -0.35
NEB-215ENST00000489048 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 CCDC129Q6ZRS4 1044 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
NEB-215ENST00000489048 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
NEB-215ENST00000489048 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
NEB-215ENST00000489048 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 MYD88Q99836 296 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
NEB-215ENST00000489048 PLEKHG2Q9H7P9 1386 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
NEB-215ENST00000489048 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
NEB-215ENST00000489048 GSDMDP57764 484 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
NEB-215ENST00000489048 BPIFA3Q9BQP9 254 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
NEB-215ENST00000489048 MST1RQ04912 1400 aa12.85□□□□□ -0.35
NEB-215ENST00000489048 SLFNL1Q499Z3 407 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms