RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
BRCA1-218ENST00000489037 BRPF1P55201 1214 aaPredicted RBP18.01■□□□□ 0.47
BRCA1-218ENST00000489037 TNIP1Q15025 636 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 TBC1D16Q8TBP0 767 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 POLLQ9UGP5 575 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
BRCA1-218ENST00000489037 ZBED9Q6R2W3 1325 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 KIF16BQ96L93 1317 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 COL4A1P02462 1669 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 POTECB2RU33 542 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
BRCA1-218ENST00000489037 COL4A5P29400 1685 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
BRCA1-218ENST00000489037 HSPA6P17066 643 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 CCT4P50991 539 aaKnown RBP17.99■□□□□ 0.47
BRCA1-218ENST00000489037 FOXO4P98177 505 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 CIAPIN1Q6FI81 312 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 ANKRD2Q9GZV1 360 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 MINPP1Q9UNW1 487 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 DUOX1Q9NRD9 1551 aa17.99■□□□□ 0.47
BRCA1-218ENST00000489037 TAF1DQ9H5J8 278 aaPredicted RBP17.98■□□□□ 0.47
BRCA1-218ENST00000489037 NBPF7P0C2Y1 421 aaPredicted RBP17.97■□□□□ 0.47
BRCA1-218ENST00000489037 EPHX2P34913 555 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 CXCL9Q07325 125 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
BRCA1-218ENST00000489037 ARHGAP45Q92619 1136 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 DBNDD1Q9H9R9 158 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 UTYO14607 1347 aa17.97■□□□□ 0.47
BRCA1-218ENST00000489037 RAD17O75943 681 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 KCNJ4P48050 445 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 DOK7Q18PE1 504 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 EAPPQ56P03 285 aaPredicted RBP17.96■□□□□ 0.47
BRCA1-218ENST00000489037 EPHA10Q5JZY3 1008 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 SUCLG2Q96I99 432 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 GPR101Q96P66 508 aaPredicted RBP17.96■□□□□ 0.47
BRCA1-218ENST00000489037 CLEC11AQ9Y240 323 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
BRCA1-218ENST00000489037 ECE2O60344 883 aa17.95■□□□□ 0.46
BRCA1-218ENST00000489037 APLP1P51693 650 aa17.94■□□□□ 0.46
BRCA1-218ENST00000489037 CHADLQ6NUI6 762 aa17.94■□□□□ 0.46
BRCA1-218ENST00000489037 LDHAL6AQ6ZMR3 332 aa17.94■□□□□ 0.46
BRCA1-218ENST00000489037 LDHDQ86WU2 507 aa17.94■□□□□ 0.46
BRCA1-218ENST00000489037 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
BRCA1-218ENST00000489037 USP44Q9H0E7 712 aa17.94■□□□□ 0.46
BRCA1-218ENST00000489037 CNNM1Q9NRU3 951 aa17.94■□□□□ 0.46
BRCA1-218ENST00000489037 YDJCA8MPS7 323 aa17.93■□□□□ 0.46
BRCA1-218ENST00000489037 CHRNDQ07001 517 aa17.93■□□□□ 0.46
BRCA1-218ENST00000489037 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
BRCA1-218ENST00000489037 BCAR3O75815 825 aa17.92■□□□□ 0.46
BRCA1-218ENST00000489037 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
BRCA1-218ENST00000489037 GMPSP49915 693 aaPredicted RBP17.92■□□□□ 0.46
BRCA1-218ENST00000489037 SCNN1DP51172 638 aa17.92■□□□□ 0.46
BRCA1-218ENST00000489037 GPRC5DQ9NZD1 345 aa17.92■□□□□ 0.46
BRCA1-218ENST00000489037 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
BRCA1-218ENST00000489037 MED23Q9ULK4 1368 aa17.91■□□□□ 0.46
BRCA1-218ENST00000489037 H7C1D1 291 aa17.91■□□□□ 0.46
BRCA1-218ENST00000489037 PSMD14O00487 310 aa17.91■□□□□ 0.46
BRCA1-218ENST00000489037 EPS15P42566 896 aa17.91■□□□□ 0.46
BRCA1-218ENST00000489037 USP50Q70EL3 339 aaPredicted RBP17.91■□□□□ 0.46
BRCA1-218ENST00000489037 PODNQ7Z5L7 613 aa17.91■□□□□ 0.46
BRCA1-218ENST00000489037 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
BRCA1-218ENST00000489037 ZNF594Q96JF6 807 aaPredicted RBP17.91■□□□□ 0.46
BRCA1-218ENST00000489037 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
BRCA1-218ENST00000489037 RPS12P25398 132 aaKnown RBP17.9■□□□□ 0.46
BRCA1-218ENST00000489037 RABL6Q3YEC7 729 aaPredicted RBP17.9■□□□□ 0.46
BRCA1-218ENST00000489037 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
BRCA1-218ENST00000489037 ATF7IPQ6VMQ6 1270 aa17.9■□□□□ 0.46
BRCA1-218ENST00000489037 PLIN1O60240 522 aa17.89■□□□□ 0.45
BRCA1-218ENST00000489037 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
BRCA1-218ENST00000489037 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
BRCA1-218ENST00000489037 DPF2Q92785 391 aa17.89■□□□□ 0.45
BRCA1-218ENST00000489037 COA1Q9GZY4 146 aa17.89■□□□□ 0.45
BRCA1-218ENST00000489037 CNOT7Q9UIV1 285 aaKnown RBP17.89■□□□□ 0.45
BRCA1-218ENST00000489037 SCN9AQ15858 1988 aa17.88■□□□□ 0.45
BRCA1-218ENST00000489037 TAF5LO75529 589 aa17.88■□□□□ 0.45
BRCA1-218ENST00000489037 GNAI3P08754 354 aa17.88■□□□□ 0.45
BRCA1-218ENST00000489037 INTS3Q68E01 1043 aaKnown RBP17.88■□□□□ 0.45
BRCA1-218ENST00000489037 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
BRCA1-218ENST00000489037 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
BRCA1-218ENST00000489037 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
BRCA1-218ENST00000489037 PSME4Q14997 1843 aa17.88■□□□□ 0.45
BRCA1-218ENST00000489037 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
BRCA1-218ENST00000489037 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
BRCA1-218ENST00000489037 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
BRCA1-218ENST00000489037 VIL1P09327 827 aaKnown RBP17.87■□□□□ 0.45
BRCA1-218ENST00000489037 TRIM27P14373 513 aa17.87■□□□□ 0.45
BRCA1-218ENST00000489037 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
BRCA1-218ENST00000489037 KCNQ5Q9NR82 932 aa17.87■□□□□ 0.45
BRCA1-218ENST00000489037 WTIPA6NIX2 430 aaPredicted RBP17.86■□□□□ 0.45
BRCA1-218ENST00000489037 MICALL2Q8IY33 904 aa17.86■□□□□ 0.45
BRCA1-218ENST00000489037 FBXW7Q969H0 707 aa17.86■□□□□ 0.45
BRCA1-218ENST00000489037 CLUAP1Q96AJ1 413 aa17.86■□□□□ 0.45
BRCA1-218ENST00000489037 MROH5Q6ZUA9 1318 aa17.86■□□□□ 0.45
BRCA1-218ENST00000489037 RSBN1LQ6PCB5 846 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-218ENST00000489037 ZNF804AQ7Z570 1209 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms