RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 C2orf69Q8N8R5 385 aa14.04□□□□□ -0.16
YIPF3-207ENST00000488966 DCPSQ96C86 337 aaKnown RBP14.04□□□□□ -0.16
YIPF3-207ENST00000488966 TAF1P21675 1872 aa14.04□□□□□ -0.16
YIPF3-207ENST00000488966 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
YIPF3-207ENST00000488966 KIF4BQ2VIQ3 1234 aa14.03□□□□□ -0.16
YIPF3-207ENST00000488966 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
YIPF3-207ENST00000488966 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
YIPF3-207ENST00000488966 EYA3Q99504 573 aa14.03□□□□□ -0.16
YIPF3-207ENST00000488966 SEC31BQ9NQW1 1179 aa14.03□□□□□ -0.16
YIPF3-207ENST00000488966 HYPKQ9NX55 129 aa14.03□□□□□ -0.16
YIPF3-207ENST00000488966 ASTN2O75129 1339 aaPredicted RBP14.03□□□□□ -0.16
YIPF3-207ENST00000488966 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.17
YIPF3-207ENST00000488966 ZNF157P51786 506 aaPredicted RBP14.02□□□□□ -0.17
YIPF3-207ENST00000488966 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
YIPF3-207ENST00000488966 ZC3H12CQ9C0D7 883 aaKnown RBP14.02□□□□□ -0.17
YIPF3-207ENST00000488966 GGA3Q9NZ52 723 aa14.02□□□□□ -0.17
YIPF3-207ENST00000488966 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
YIPF3-207ENST00000488966 UFL1O94874 794 aa14.01□□□□□ -0.17
YIPF3-207ENST00000488966 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
YIPF3-207ENST00000488966 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
YIPF3-207ENST00000488966 RNF186Q9NXI6 227 aa14.01□□□□□ -0.17
YIPF3-207ENST00000488966 PODXL2Q9NZ53 605 aa14.01□□□□□ -0.17
YIPF3-207ENST00000488966 MYBBP1AQ9BQG0 1328 aaKnown RBP14□□□□□ -0.17
YIPF3-207ENST00000488966 RIC3Q7Z5B4 369 aa14□□□□□ -0.17
YIPF3-207ENST00000488966 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
YIPF3-207ENST00000488966 MBIPQ9NS73 344 aa14□□□□□ -0.17
YIPF3-207ENST00000488966 SAGE1Q9NXZ1 904 aa14□□□□□ -0.17
YIPF3-207ENST00000488966 ANKIB1Q9P2G1 1089 aa14□□□□□ -0.17
YIPF3-207ENST00000488966 ADAMTS8Q9UP79 889 aa14□□□□□ -0.17
YIPF3-207ENST00000488966 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
YIPF3-207ENST00000488966 G3V3G9 751 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 TRPA1O75762 1119 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 SLC10A3P09131 477 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 ZNF280AP59817 542 aaPredicted RBP13.99□□□□□ -0.17
YIPF3-207ENST00000488966 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
YIPF3-207ENST00000488966 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 CDCA5Q96FF9 252 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 CSRNP1Q96S65 589 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 PHAXQ9H814 394 aaKnown RBP13.99□□□□□ -0.17
YIPF3-207ENST00000488966 GGA1Q9UJY5 639 aa13.99□□□□□ -0.17
YIPF3-207ENST00000488966 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
YIPF3-207ENST00000488966 SCARF1Q14162 830 aa13.98□□□□□ -0.17
YIPF3-207ENST00000488966 ANGEL2Q5VTE6 544 aaKnown RBP13.98□□□□□ -0.17
YIPF3-207ENST00000488966 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
YIPF3-207ENST00000488966 CCDC85AQ96PX6 553 aaPredicted RBP13.98□□□□□ -0.17
YIPF3-207ENST00000488966 MYD88Q99836 296 aa13.98□□□□□ -0.17
YIPF3-207ENST00000488966 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
YIPF3-207ENST00000488966 ZNF853P0CG23 659 aa13.97□□□□□ -0.17
YIPF3-207ENST00000488966 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
YIPF3-207ENST00000488966 CCDC152Q4G0S7 254 aa13.97□□□□□ -0.17
YIPF3-207ENST00000488966 RASAL3Q86YV0 1011 aa13.97□□□□□ -0.17
YIPF3-207ENST00000488966 AGBL3Q8NEM8 1001 aa13.97□□□□□ -0.17
YIPF3-207ENST00000488966 WTIPA6NIX2 430 aaPredicted RBP13.96□□□□□ -0.17
YIPF3-207ENST00000488966 PDE8AO60658 829 aa13.96□□□□□ -0.17
YIPF3-207ENST00000488966 PCCAP05165 728 aaPredicted RBP13.96□□□□□ -0.17
YIPF3-207ENST00000488966 HSP90B1P14625 803 aaKnown RBP13.96□□□□□ -0.17
YIPF3-207ENST00000488966 SOX10P56693 466 aa13.96□□□□□ -0.17
YIPF3-207ENST00000488966 CCDC191Q8NCU4 936 aa13.96□□□□□ -0.17
YIPF3-207ENST00000488966 GMLQ99445 158 aa13.96□□□□□ -0.17
YIPF3-207ENST00000488966 SCAF8Q9UPN6 1271 aaKnown RBP13.96□□□□□ -0.17
YIPF3-207ENST00000488966 ZNF609O15014 1411 aa13.96□□□□□ -0.18
YIPF3-207ENST00000488966 SCN9AQ15858 1988 aa13.95□□□□□ -0.18
YIPF3-207ENST00000488966 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
YIPF3-207ENST00000488966 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
YIPF3-207ENST00000488966 CWC25Q9NXE8 425 aaPredicted RBP13.95□□□□□ -0.18
YIPF3-207ENST00000488966 XDHP47989 1333 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
YIPF3-207ENST00000488966 IFT57Q9NWB7 429 aa13.94□□□□□ -0.18
YIPF3-207ENST00000488966 APAF1O14727 1248 aa13.93□□□□□ -0.18
YIPF3-207ENST00000488966 ATP2B4P23634 1241 aa13.93□□□□□ -0.18
YIPF3-207ENST00000488966 FKBP1BP68106 108 aa13.93□□□□□ -0.18
YIPF3-207ENST00000488966 PRAMEF18Q5VWM3 479 aa13.93□□□□□ -0.18
YIPF3-207ENST00000488966 PODNQ7Z5L7 613 aa13.93□□□□□ -0.18
YIPF3-207ENST00000488966 CTU1Q7Z7A3 348 aaKnown RBP13.93□□□□□ -0.18
YIPF3-207ENST00000488966 MXD3Q9BW11 206 aa13.93□□□□□ -0.18
YIPF3-207ENST00000488966 PITPNM2Q9BZ72 1349 aa13.92□□□□□ -0.18
YIPF3-207ENST00000488966 UBE2Q2LH0YL09 131 aa13.92□□□□□ -0.18
YIPF3-207ENST00000488966 CTSWP56202 376 aa13.92□□□□□ -0.18
YIPF3-207ENST00000488966 GNAI1P63096 354 aa13.92□□□□□ -0.18
YIPF3-207ENST00000488966 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
YIPF3-207ENST00000488966 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
YIPF3-207ENST00000488966 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
YIPF3-207ENST00000488966 CDC5LQ99459 802 aaKnown RBP13.91□□□□□ -0.18
YIPF3-207ENST00000488966 MAP3K2Q9Y2U5 619 aa13.91□□□□□ -0.18
YIPF3-207ENST00000488966 DDX58O95786 925 aaKnown RBP13.9□□□□□ -0.18
YIPF3-207ENST00000488966 IGKV5-2P06315 115 aa13.9□□□□□ -0.18
YIPF3-207ENST00000488966 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
YIPF3-207ENST00000488966 TSPYL6Q8N831 410 aa13.9□□□□□ -0.18
YIPF3-207ENST00000488966 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
YIPF3-207ENST00000488966 GREM2Q9H772 168 aa13.9□□□□□ -0.18
YIPF3-207ENST00000488966 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
YIPF3-207ENST00000488966 PAPPA2Q9BXP8 1791 aa13.89□□□□□ -0.19
YIPF3-207ENST00000488966 MED23Q9ULK4 1368 aa13.89□□□□□ -0.19
YIPF3-207ENST00000488966 TBC1D8O95759 1140 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms