RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 MAP3K2Q9Y2U5 619 aa20.54■□□□□ 0.88
ERGIC3-217ENST00000488935 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
ERGIC3-217ENST00000488935 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
ERGIC3-217ENST00000488935 UFL1O94874 794 aa20.52■□□□□ 0.88
ERGIC3-217ENST00000488935 G2E3Q7L622 706 aa20.52■□□□□ 0.88
ERGIC3-217ENST00000488935 CWC25Q9NXE8 425 aaPredicted RBP20.52■□□□□ 0.88
ERGIC3-217ENST00000488935 ANKIB1Q9P2G1 1089 aa20.52■□□□□ 0.88
ERGIC3-217ENST00000488935 PGAP2Q9UHJ9 254 aa20.52■□□□□ 0.88
ERGIC3-217ENST00000488935 ASTN2O75129 1339 aaPredicted RBP20.52■□□□□ 0.87
ERGIC3-217ENST00000488935 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 MAP2K1Q02750 393 aaPredicted RBP20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 CALD1Q05682 793 aaKnown RBP20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 CCDC30Q5VVM6 783 aa20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 SAPCD2Q86UD0 394 aa20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 CCDC191Q8NCU4 936 aa20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 ZIC5Q96T25 663 aa20.51■□□□□ 0.87
ERGIC3-217ENST00000488935 PI4KAP2A4QPH2 592 aa20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 ADM5C9JUS6 153 aa20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 PDE8AO60658 829 aa20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 IGKV5-2P06315 115 aa20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 PI4KAP1Q8N8J0 262 aa20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 ZC3H12CQ9C0D7 883 aaKnown RBP20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 SPEF2Q9C093 1822 aa20.5■□□□□ 0.87
ERGIC3-217ENST00000488935 ECE1P42892 770 aa20.49■□□□□ 0.87
ERGIC3-217ENST00000488935 CWF19L2Q2TBE0 894 aaKnown RBP20.49■□□□□ 0.87
ERGIC3-217ENST00000488935 CCDC152Q4G0S7 254 aa20.49■□□□□ 0.87
ERGIC3-217ENST00000488935 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
ERGIC3-217ENST00000488935 EYA3Q99504 573 aa20.49■□□□□ 0.87
ERGIC3-217ENST00000488935 G3V3G9 751 aa20.48■□□□□ 0.87
ERGIC3-217ENST00000488935 DCAF8Q5TAQ9 597 aa20.48■□□□□ 0.87
ERGIC3-217ENST00000488935 DPF2Q92785 391 aa20.48■□□□□ 0.87
ERGIC3-217ENST00000488935 GGA1Q9UJY5 639 aa20.48■□□□□ 0.87
ERGIC3-217ENST00000488935 SCAF8Q9UPN6 1271 aaKnown RBP20.48■□□□□ 0.87
ERGIC3-217ENST00000488935 CDHR2Q9BYE9 1310 aa20.48■□□□□ 0.87
ERGIC3-217ENST00000488935 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
ERGIC3-217ENST00000488935 KSR2Q6VAB6 950 aa20.47■□□□□ 0.87
ERGIC3-217ENST00000488935 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
ERGIC3-217ENST00000488935 ZC3H15Q8WU90 426 aaKnown RBP20.47■□□□□ 0.87
ERGIC3-217ENST00000488935 KRT26Q7Z3Y9 468 aa20.46■□□□□ 0.87
ERGIC3-217ENST00000488935 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
ERGIC3-217ENST00000488935 PODXL2Q9NZ53 605 aa20.46■□□□□ 0.87
ERGIC3-217ENST00000488935 CASP8AP2Q9UKL3 1982 aa20.46■□□□□ 0.87
ERGIC3-217ENST00000488935 THSD7BQ9C0I4 1608 aa20.45■□□□□ 0.87
ERGIC3-217ENST00000488935 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
ERGIC3-217ENST00000488935 BEGAINQ9BUH8 593 aa20.45■□□□□ 0.86
ERGIC3-217ENST00000488935 MXD3Q9BW11 206 aa20.45■□□□□ 0.86
ERGIC3-217ENST00000488935 GREM2Q9H772 168 aa20.45■□□□□ 0.86
ERGIC3-217ENST00000488935 SLC4A2P04920 1241 aa20.44■□□□□ 0.86
ERGIC3-217ENST00000488935 VIL1P09327 827 aaKnown RBP20.44■□□□□ 0.86
ERGIC3-217ENST00000488935 CTSWP56202 376 aa20.44■□□□□ 0.86
ERGIC3-217ENST00000488935 HUNKP57058 714 aa20.44■□□□□ 0.86
ERGIC3-217ENST00000488935 KIF4BQ2VIQ3 1234 aa20.44■□□□□ 0.86
ERGIC3-217ENST00000488935 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
ERGIC3-217ENST00000488935 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
ERGIC3-217ENST00000488935 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
ERGIC3-217ENST00000488935 GGA3Q9NZ52 723 aa20.43■□□□□ 0.86
ERGIC3-217ENST00000488935 MYH3P11055 1940 aa20.43■□□□□ 0.86
ERGIC3-217ENST00000488935 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
ERGIC3-217ENST00000488935 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
ERGIC3-217ENST00000488935 DCPSQ96C86 337 aaKnown RBP20.42■□□□□ 0.86
ERGIC3-217ENST00000488935 ABHD8Q96I13 439 aa20.42■□□□□ 0.86
ERGIC3-217ENST00000488935 MAP2K2P36507 400 aa20.41■□□□□ 0.86
ERGIC3-217ENST00000488935 RSBN1LQ6PCB5 846 aaPredicted RBP20.41■□□□□ 0.86
ERGIC3-217ENST00000488935 FBXW7Q969H0 707 aa20.41■□□□□ 0.86
ERGIC3-217ENST00000488935 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
ERGIC3-217ENST00000488935 MINPP1Q9UNW1 487 aa20.41■□□□□ 0.86
ERGIC3-217ENST00000488935 XDHP47989 1333 aa20.41■□□□□ 0.86
ERGIC3-217ENST00000488935 HSP90B1P14625 803 aaKnown RBP20.4■□□□□ 0.86
ERGIC3-217ENST00000488935 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
ERGIC3-217ENST00000488935 SCARF1Q14162 830 aa20.4■□□□□ 0.86
ERGIC3-217ENST00000488935 TXNRD3Q86VQ6 643 aa20.4■□□□□ 0.86
ERGIC3-217ENST00000488935 GBA2Q9HCG7 927 aaPredicted RBP20.4■□□□□ 0.86
ERGIC3-217ENST00000488935 ATP2B4P23634 1241 aa20.39■□□□□ 0.85
ERGIC3-217ENST00000488935 KLRK1P26718 216 aa20.39■□□□□ 0.85
ERGIC3-217ENST00000488935 ANGEL2Q5VTE6 544 aaKnown RBP20.39■□□□□ 0.85
ERGIC3-217ENST00000488935 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
ERGIC3-217ENST00000488935 H7C1W4 665 aa20.38■□□□□ 0.85
ERGIC3-217ENST00000488935 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
ERGIC3-217ENST00000488935 PRAMEF18Q5VWM3 479 aa20.38■□□□□ 0.85
ERGIC3-217ENST00000488935 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
ERGIC3-217ENST00000488935 PSME4Q14997 1843 aa20.38■□□□□ 0.85
ERGIC3-217ENST00000488935 SNAP23O00161 211 aa20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 EXOSC9Q06265 439 aaKnown RBP20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 FLIIQ13045 1269 aa20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 MOB2Q70IA6 237 aa20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 C2orf69Q8N8R5 385 aa20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 CDCA5Q96FF9 252 aa20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 GMLQ99445 158 aa20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 SPINK5Q9NQ38 1064 aaPredicted RBP20.37■□□□□ 0.85
ERGIC3-217ENST00000488935 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 CCDC85CA6NKD9 419 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 FAM155AB1AL88 458 aaPredicted RBP20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 F6X3S4 739 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 FKBP5Q13451 457 aaPredicted RBP20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 GCKRQ14397 625 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 FAM161AQ3B820 660 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 RGMBQ6NW40 437 aa20.36■□□□□ 0.85
ERGIC3-217ENST00000488935 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms