RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 UFL1O94874 794 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 EPS15P42566 896 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 JMYQ8N9B5 988 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 PLA2G12BQ9BX93 195 aa17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
SPTLC1-207ENST00000488921 YDJCA8MPS7 323 aa17.56■□□□□ 0.4
SPTLC1-207ENST00000488921 RIMBP2O15034 1052 aa17.56■□□□□ 0.4
SPTLC1-207ENST00000488921 GMPSP49915 693 aaPredicted RBP17.56■□□□□ 0.4
SPTLC1-207ENST00000488921 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
SPTLC1-207ENST00000488921 GREM2Q9H772 168 aa17.56■□□□□ 0.4
SPTLC1-207ENST00000488921 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
SPTLC1-207ENST00000488921 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 G3V3G9 751 aa17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 ECE2O60344 883 aa17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 ITGBL1O95965 494 aaPredicted RBP17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
SPTLC1-207ENST00000488921 A0A1B0GUL6 1792 aa17.54■□□□□ 0.4
SPTLC1-207ENST00000488921 ATP2B4P23634 1241 aa17.54■□□□□ 0.4
SPTLC1-207ENST00000488921 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
SPTLC1-207ENST00000488921 CASP7P55210 303 aa17.54■□□□□ 0.4
SPTLC1-207ENST00000488921 TMEM88BA6NKF7 163 aa17.53■□□□□ 0.4
SPTLC1-207ENST00000488921 F6X3S4 739 aa17.53■□□□□ 0.4
SPTLC1-207ENST00000488921 RPS12P25398 132 aaKnown RBP17.53■□□□□ 0.4
SPTLC1-207ENST00000488921 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
SPTLC1-207ENST00000488921 DPF2Q92785 391 aa17.53■□□□□ 0.4
SPTLC1-207ENST00000488921 H7C1D1 291 aa17.52■□□□□ 0.4
SPTLC1-207ENST00000488921 PSMD14O00487 310 aa17.52■□□□□ 0.4
SPTLC1-207ENST00000488921 ITGA6P23229 1130 aa17.52■□□□□ 0.4
SPTLC1-207ENST00000488921 DOK7Q18PE1 504 aa17.52■□□□□ 0.4
SPTLC1-207ENST00000488921 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
SPTLC1-207ENST00000488921 MED23Q9ULK4 1368 aa17.52■□□□□ 0.39
SPTLC1-207ENST00000488921 ZNF609O15014 1411 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 CSF1RP07333 972 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 FAM161AQ3B820 660 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 CNOT7Q9UIV1 285 aaKnown RBP17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 MINPP1Q9UNW1 487 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
SPTLC1-207ENST00000488921 GRM8O00222 908 aa17.5■□□□□ 0.39
SPTLC1-207ENST00000488921 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
SPTLC1-207ENST00000488921 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
SPTLC1-207ENST00000488921 ZC3H15Q8WU90 426 aaKnown RBP17.5■□□□□ 0.39
SPTLC1-207ENST00000488921 SRCIN1Q9C0H9 1055 aa17.5■□□□□ 0.39
SPTLC1-207ENST00000488921 PTPRCP08575 1304 aa17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 PCNTO95613 3336 aa17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 CCT4P50991 539 aaKnown RBP17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 ANKRD2Q9GZV1 360 aa17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 C9orf78Q9NZ63 289 aaPredicted RBP17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
SPTLC1-207ENST00000488921 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
SPTLC1-207ENST00000488921 LEMD3Q9Y2U8 911 aa17.48■□□□□ 0.39
SPTLC1-207ENST00000488921 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
SPTLC1-207ENST00000488921 VIL1P09327 827 aaKnown RBP17.47■□□□□ 0.39
SPTLC1-207ENST00000488921 IFIT5Q13325 482 aaKnown RBP17.47■□□□□ 0.39
SPTLC1-207ENST00000488921 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
SPTLC1-207ENST00000488921 TRPM4Q8TD43 1214 aa17.47■□□□□ 0.39
SPTLC1-207ENST00000488921 PGAP2Q9UHJ9 254 aa17.47■□□□□ 0.39
SPTLC1-207ENST00000488921 CT47B1P0C2W7 299 aaPredicted RBP17.46■□□□□ 0.39
SPTLC1-207ENST00000488921 FOXO4P98177 505 aa17.46■□□□□ 0.39
SPTLC1-207ENST00000488921 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
SPTLC1-207ENST00000488921 AGBL3Q8NEM8 1001 aa17.46■□□□□ 0.39
SPTLC1-207ENST00000488921 KCNQ5Q9NR82 932 aa17.46■□□□□ 0.39
SPTLC1-207ENST00000488921 RASSF10A6NK89 507 aa17.45■□□□□ 0.38
SPTLC1-207ENST00000488921 KCNJ4P48050 445 aa17.45■□□□□ 0.38
SPTLC1-207ENST00000488921 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
SPTLC1-207ENST00000488921 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
SPTLC1-207ENST00000488921 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
SPTLC1-207ENST00000488921 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
SPTLC1-207ENST00000488921 POLR2AP24928 1970 aaKnown RBP17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 THSD7BQ9C0I4 1608 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 SHTN1A0MZ66 631 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 USP17L3A6NCW0 530 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 USP17L4A6NCW7 530 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 CHRNDQ07001 517 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 LMBR1LQ6UX01 489 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 USP17L1Q7RTZ2 530 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 SSH1Q8WYL5 1049 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 COA1Q9GZY4 146 aa17.44■□□□□ 0.38
SPTLC1-207ENST00000488921 TRAF5O00463 557 aa17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 HSPA1AP0DMV8 641 aaKnown RBP17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 HSPA1BP0DMV9 641 aaKnown RBP17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 TBC1D10BQ4KMP7 808 aaPredicted RBP17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 GLIS2Q9BZE0 524 aaPredicted RBP17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 UTYO14607 1347 aa17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
SPTLC1-207ENST00000488921 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms