RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 LRRFIP2Q9Y608 721 aaKnown RBP11.12□□□□□ -0.63
SMKR1-202ENST00000488846 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 GNAI2P04899 355 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 IARSP41252 1262 aaKnown RBP11.11□□□□□ -0.63
SMKR1-202ENST00000488846 GPSM2P81274 684 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 MVPQ14764 893 aaKnown RBP11.11□□□□□ -0.63
SMKR1-202ENST00000488846 DPP8Q6V1X1 898 aaPredicted RBP11.11□□□□□ -0.63
SMKR1-202ENST00000488846 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
SMKR1-202ENST00000488846 RNF181Q9P0P0 153 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 POLLQ9UGP5 575 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 COL4A5P29400 1685 aa11.11□□□□□ -0.63
SMKR1-202ENST00000488846 XDHP47989 1333 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 YY1P25490 414 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
SMKR1-202ENST00000488846 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 C20orf194Q5TEA3 1177 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 ITPRIPQ8IWB1 547 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 TBC1D16Q8TBP0 767 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 DDX19BQ9UMR2 479 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 NSFL1CQ9UNZ2 370 aaKnown RBP11.1□□□□□ -0.63
SMKR1-202ENST00000488846 RIPOR2Q9Y4F9 1068 aa11.1□□□□□ -0.63
SMKR1-202ENST00000488846 SPEF2Q9C093 1822 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 FZD9O00144 591 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 ATP2B4P23634 1241 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
SMKR1-202ENST00000488846 CHRNDQ07001 517 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 LDHAL6AQ6ZMR3 332 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
SMKR1-202ENST00000488846 ANKRD2Q9GZV1 360 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 ZBTB40Q9NUA8 1239 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 IRS2Q9Y4H2 1338 aa11.09□□□□□ -0.63
SMKR1-202ENST00000488846 C15orf52Q6ZUT6 534 aaKnown RBP11.08□□□□□ -0.64
SMKR1-202ENST00000488846 VGLL2Q8N8G2 317 aa11.08□□□□□ -0.64
SMKR1-202ENST00000488846 PUS3Q9BZE2 481 aaKnown RBP11.08□□□□□ -0.64
SMKR1-202ENST00000488846 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
SMKR1-202ENST00000488846 ANKIB1Q9P2G1 1089 aa11.08□□□□□ -0.64
SMKR1-202ENST00000488846 GGA1Q9UJY5 639 aa11.08□□□□□ -0.64
SMKR1-202ENST00000488846 LEMD3Q9Y2U8 911 aa11.08□□□□□ -0.64
SMKR1-202ENST00000488846 COG6Q9Y2V7 657 aa11.08□□□□□ -0.64
SMKR1-202ENST00000488846 MED23Q9ULK4 1368 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 WTIPA6NIX2 430 aaPredicted RBP11.07□□□□□ -0.64
SMKR1-202ENST00000488846 PPIP5K2O43314 1243 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 CIAO1O76071 339 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 ATP8B2P98198 1209 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 POLA2Q14181 598 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 AOC3Q16853 763 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 WASHC4Q2M389 1173 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 TAF7LQ5H9L4 462 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 ATG9AQ7Z3C6 839 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 EYA3Q99504 573 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
SMKR1-202ENST00000488846 MROH5Q6ZUA9 1318 aa11.07□□□□□ -0.64
SMKR1-202ENST00000488846 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 GLTPD2A6NH11 291 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 EYA2O00167 538 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 SRGAP3O43295 1099 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 UFL1O94874 794 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 LRRC24Q50LG9 513 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 LARGE2Q8N3Y3 721 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 ZNF784Q8NCA9 323 aaPredicted RBP11.06□□□□□ -0.64
SMKR1-202ENST00000488846 KLHDC4Q8TBB5 520 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 ZNF804BA4D1E1 1349 aa11.06□□□□□ -0.64
SMKR1-202ENST00000488846 C6orf229H3BNL8 230 aa11.05□□□□□ -0.64
SMKR1-202ENST00000488846 UBE4AQ14139 1066 aa11.05□□□□□ -0.64
SMKR1-202ENST00000488846 CEP85Q6P2H3 762 aa11.05□□□□□ -0.64
SMKR1-202ENST00000488846 ZNRF3Q9ULT6 936 aa11.05□□□□□ -0.64
SMKR1-202ENST00000488846 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 YDJCA8MPS7 323 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 TAF5LO75529 589 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 PDE8BO95263 885 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 FGFR2P21802 821 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
SMKR1-202ENST00000488846 TXNRD3Q86VQ6 643 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
SMKR1-202ENST00000488846 NIM1KQ8IY84 436 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
SMKR1-202ENST00000488846 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
SMKR1-202ENST00000488846 ZC3H12CQ9C0D7 883 aaKnown RBP11.04□□□□□ -0.64
SMKR1-202ENST00000488846 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 PA2G4Q9UQ80 394 aaKnown RBP11.04□□□□□ -0.64
SMKR1-202ENST00000488846 ZNF541Q9H0D2 1346 aa11.04□□□□□ -0.64
SMKR1-202ENST00000488846 ZNF609O15014 1411 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 SNAP23O00161 211 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 ZBTB22O15209 634 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 PODNQ7Z5L7 613 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 SIRT2Q8IXJ6 389 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 GPC2Q8N158 579 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
SMKR1-202ENST00000488846 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
SMKR1-202ENST00000488846 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms