RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 ALDH1L1O75891 902 aa13.93□□□□□ -0.18
NUP98-212ENST00000488828 RPS8P62241 208 aaKnown RBP13.93□□□□□ -0.18
NUP98-212ENST00000488828 ZNF784Q8NCA9 323 aaPredicted RBP13.93□□□□□ -0.18
NUP98-212ENST00000488828 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
NUP98-212ENST00000488828 CHMP3Q9Y3E7 222 aa13.93□□□□□ -0.18
NUP98-212ENST00000488828 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
NUP98-212ENST00000488828 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 SLX4Q8IY92 1834 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
NUP98-212ENST00000488828 BCAR3O75815 825 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 CTSWP56202 376 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 SP8Q8IXZ3 490 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
NUP98-212ENST00000488828 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 ZNF277Q9NRM2 450 aaPredicted RBP13.92□□□□□ -0.18
NUP98-212ENST00000488828 BRCA1P38398 1863 aaKnown RBP13.92□□□□□ -0.18
NUP98-212ENST00000488828 CHD4Q14839 1912 aa13.92□□□□□ -0.18
NUP98-212ENST00000488828 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 UTRNP46939 3433 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 GRM8O00222 908 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 FKBP4Q02790 459 aaKnown RBP eCLIP13.91□□□□□ -0.18
NUP98-212ENST00000488828 GRIPAP1Q4V328 841 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 DPP8Q6V1X1 898 aaPredicted RBP13.91□□□□□ -0.18
NUP98-212ENST00000488828 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 TTLL11Q8NHH1 800 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
NUP98-212ENST00000488828 ARFGEF1Q9Y6D6 1849 aa13.91□□□□□ -0.18
NUP98-212ENST00000488828 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.18
NUP98-212ENST00000488828 MPNDQ8N594 471 aa13.9□□□□□ -0.18
NUP98-212ENST00000488828 CDC5LQ99459 802 aaKnown RBP13.9□□□□□ -0.18
NUP98-212ENST00000488828 GPBP1L1Q9HC44 474 aaPredicted RBP13.9□□□□□ -0.18
NUP98-212ENST00000488828 METRNQ9UJH8 293 aa13.9□□□□□ -0.18
NUP98-212ENST00000488828 NSFL1CQ9UNZ2 370 aaKnown RBP13.9□□□□□ -0.18
NUP98-212ENST00000488828 KIF16BQ96L93 1317 aa13.9□□□□□ -0.19
NUP98-212ENST00000488828 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 C7P10643 843 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
NUP98-212ENST00000488828 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 GREM2Q9H772 168 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 LTBP3Q9NS15 1303 aa13.89□□□□□ -0.19
NUP98-212ENST00000488828 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
NUP98-212ENST00000488828 PRELPP51888 382 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 CASP7P55210 303 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 TAF7LQ5H9L4 462 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 LARGE2Q8N3Y3 721 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 CLUAP1Q96AJ1 413 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 MPHOSPH8Q99549 860 aa13.88□□□□□ -0.19
NUP98-212ENST00000488828 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
NUP98-212ENST00000488828 ITGA6P23229 1130 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
NUP98-212ENST00000488828 BRPF1P55201 1214 aaPredicted RBP13.87□□□□□ -0.19
NUP98-212ENST00000488828 IFIT5Q13325 482 aaKnown RBP13.87□□□□□ -0.19
NUP98-212ENST00000488828 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 PSMD1Q99460 953 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 PLA2G12BQ9BX93 195 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
NUP98-212ENST00000488828 G3V3G9 751 aa13.86□□□□□ -0.19
NUP98-212ENST00000488828 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
NUP98-212ENST00000488828 FOXO4P98177 505 aa13.86□□□□□ -0.19
NUP98-212ENST00000488828 FAM161AQ3B820 660 aa13.86□□□□□ -0.19
NUP98-212ENST00000488828 ATF7IPQ6VMQ6 1270 aa13.86□□□□□ -0.19
NUP98-212ENST00000488828 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
NUP98-212ENST00000488828 DDX60Q8IY21 1712 aaKnown RBP13.85□□□□□ -0.19
NUP98-212ENST00000488828 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 CSF1RP07333 972 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 GPSM2P81274 684 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 EPHA10Q5JZY3 1008 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 IER5LQ5T953 404 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 FTSJ3Q8IY81 847 aaKnown RBP13.85□□□□□ -0.19
NUP98-212ENST00000488828 SUCLG2Q96I99 432 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 HDAC5Q9UQL6 1122 aa13.85□□□□□ -0.19
NUP98-212ENST00000488828 LAMB2P55268 1798 aa13.84□□□□□ -0.19
NUP98-212ENST00000488828 UBTFL1P0CB47 393 aaPredicted RBP13.84□□□□□ -0.19
NUP98-212ENST00000488828 AOC3Q16853 763 aa13.84□□□□□ -0.19
NUP98-212ENST00000488828 WASHC4Q2M389 1173 aa13.84□□□□□ -0.19
NUP98-212ENST00000488828 NIM1KQ8IY84 436 aa13.84□□□□□ -0.19
NUP98-212ENST00000488828 BSDC1Q9NW68 430 aaPredicted RBP13.84□□□□□ -0.19
NUP98-212ENST00000488828 TAF1P21675 1872 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 UFL1O94874 794 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 TRIM27P14373 513 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 EIF6P56537 245 aaKnown RBP13.83□□□□□ -0.2
NUP98-212ENST00000488828 MKRN3Q13064 507 aaKnown RBP13.83□□□□□ -0.2
NUP98-212ENST00000488828 NBR1Q14596 966 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 C16orf71Q8IYS4 520 aaPredicted RBP13.83□□□□□ -0.2
NUP98-212ENST00000488828 EYA3Q99504 573 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 ZC3H12CQ9C0D7 883 aaKnown RBP13.83□□□□□ -0.2
NUP98-212ENST00000488828 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
NUP98-212ENST00000488828 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
NUP98-212ENST00000488828 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms