RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 PANK1Q8TE04 598 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 FRAT1Q92837 279 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-212ENST00000488774 RTFDC1Q9BY42 306 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-212ENST00000488774 MINPP1Q9UNW1 487 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 PDZRN3Q9UPQ7 1066 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
PTPRD-212ENST00000488774 TAF5LO75529 589 aa8.26□□□□□ -1.09
PTPRD-212ENST00000488774 CT47B1P0C2W7 299 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-212ENST00000488774 IARSP41252 1262 aaKnown RBP8.26□□□□□ -1.09
PTPRD-212ENST00000488774 RABL6Q3YEC7 729 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-212ENST00000488774 LRRC24Q50LG9 513 aa8.26□□□□□ -1.09
PTPRD-212ENST00000488774 INTS3Q68E01 1043 aaKnown RBP8.26□□□□□ -1.09
PTPRD-212ENST00000488774 PSMD1Q99460 953 aa8.26□□□□□ -1.09
PTPRD-212ENST00000488774 C1orf115Q9H7X2 142 aa8.26□□□□□ -1.09
PTPRD-212ENST00000488774 LRRFIP2Q9Y608 721 aaKnown RBP8.26□□□□□ -1.09
PTPRD-212ENST00000488774 ECM29Q5VYK3 1845 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 FZD9O00144 591 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 BBOX1O75936 387 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 CCDC152Q4G0S7 254 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 ATF7IPQ6VMQ6 1270 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 MPNDQ8N594 471 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 TBC1D16Q8TBP0 767 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 RRAGCQ9HB90 399 aa8.25□□□□□ -1.09
PTPRD-212ENST00000488774 PA2G4Q9UQ80 394 aaKnown RBP8.25□□□□□ -1.09
PTPRD-212ENST00000488774 TRPM7Q96QT4 1865 aa8.24□□□□□ -1.09
PTPRD-212ENST00000488774 EGFRP00533 1210 aa8.24□□□□□ -1.09
PTPRD-212ENST00000488774 DPP8Q6V1X1 898 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-212ENST00000488774 RTKN2Q8IZC4 609 aa8.24□□□□□ -1.09
PTPRD-212ENST00000488774 DBNDD1Q9H9R9 158 aa8.24□□□□□ -1.09
PTPRD-212ENST00000488774 C9orf78Q9NZ63 289 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-212ENST00000488774 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
PTPRD-212ENST00000488774 PNMA6EA0A0J9YXQ4 647 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 GLTPD2A6NH11 291 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 PPIP5K2O43314 1243 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 PTPN12Q05209 780 aaKnown RBP8.23□□□□□ -1.09
PTPRD-212ENST00000488774 FMR1Q06787 632 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPRD-212ENST00000488774 CHRNDQ07001 517 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 CXCL9Q07325 125 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 KIAA2012Q0VF49 1180 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 DLK2Q6UY11 383 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 ATG9AQ7Z3C6 839 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 ANKRD18AQ8IVF6 992 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 VGLL2Q8N8G2 317 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 ARHGAP45Q92619 1136 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 BSDC1Q9NW68 430 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-212ENST00000488774 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 RIPOR2Q9Y4F9 1068 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 CDK5RAP2Q96SN8 1893 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 KIF16BQ96L93 1317 aa8.23□□□□□ -1.09
PTPRD-212ENST00000488774 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
PTPRD-212ENST00000488774 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
PTPRD-212ENST00000488774 RAD17O75943 681 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 UFL1O94874 794 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 EPS15P42566 896 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 SCNN1DP51172 638 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 ZKSCAN2Q63HK3 967 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 LARGE2Q8N3Y3 721 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 API5Q9BZZ5 524 aaKnown RBP8.22□□□□□ -1.09
PTPRD-212ENST00000488774 RCAN3Q9UKA8 241 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
PTPRD-212ENST00000488774 AOX1Q06278 1338 aa8.22□□□□□ -1.09
PTPRD-212ENST00000488774 MYH2Q9UKX2 1941 aa8.21□□□□□ -1.09
PTPRD-212ENST00000488774 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 PSMD14O00487 310 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 ECE2O60344 883 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 CCT4P50991 539 aaKnown RBP8.21□□□□□ -1.1
PTPRD-212ENST00000488774 HTRA3P83110 453 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 GRIK5Q16478 980 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 SOGA3Q5TF21 947 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 SIRT2Q8IXJ6 389 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
PTPRD-212ENST00000488774 JAG2Q9Y219 1238 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 PCDHAC2Q9Y5I4 1007 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 ASTN2O75129 1339 aaPredicted RBP8.21□□□□□ -1.1
PTPRD-212ENST00000488774 XDHP47989 1333 aa8.21□□□□□ -1.1
PTPRD-212ENST00000488774 ANKRD18BA2A2Z9 1011 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 UBTFL1P0CB47 393 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-212ENST00000488774 HIRAP54198 1017 aaPredicted RBP8.2□□□□□ -1.1
PTPRD-212ENST00000488774 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
PTPRD-212ENST00000488774 WASHC4Q2M389 1173 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 CC2D2BQ6DHV5 1058 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 DZIP1LQ8IYY4 767 aaKnown RBP8.2□□□□□ -1.1
PTPRD-212ENST00000488774 TRPM4Q8TD43 1214 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 CDC5LQ99459 802 aaKnown RBP8.2□□□□□ -1.1
PTPRD-212ENST00000488774 SIL1Q9H173 461 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 ANKIB1Q9P2G1 1089 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
PTPRD-212ENST00000488774 FGFR2P21802 821 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 GMPSP49915 693 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-212ENST00000488774 LDHAL6AQ6ZMR3 332 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 CERS5Q8N5B7 392 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 L3MBTL3Q96JM7 780 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-212ENST00000488774 GMLQ99445 158 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 GGA1Q9UJY5 639 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms