RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 GNG11P61952 73 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
MCF2L-229ENST00000488765 FUT8Q9BYC5 575 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 IRX2Q9BZI1 471 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-229ENST00000488765 CXorf56Q9H5V9 222 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 DIP2BQ9P265 1576 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 MAGEA9P43362 315 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 CCDC30Q5VVM6 783 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 WDR24Q96S15 920 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 LRRC2Q9BYS8 371 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
MCF2L-229ENST00000488765 H3BQV1 296 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 FAM193AP78312 1265 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 LONRF2Q1L5Z9 754 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 CTR9Q6PD62 1173 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 GOLPH3LQ9H4A5 285 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 LIG3P49916 1009 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
MCF2L-229ENST00000488765 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
MCF2L-229ENST00000488765 TTC21BQ7Z4L5 1316 aa18.8■□□□□ 0.6
MCF2L-229ENST00000488765 HSP90B1P14625 803 aaKnown RBP18.8■□□□□ 0.6
MCF2L-229ENST00000488765 BICC1Q9H694 974 aaKnown RBP18.8■□□□□ 0.6
MCF2L-229ENST00000488765 PLEKHG2Q9H7P9 1386 aa18.8■□□□□ 0.6
MCF2L-229ENST00000488765 KCNA6P17658 529 aa18.8■□□□□ 0.6
MCF2L-229ENST00000488765 ZFYVE9O95405 1425 aa18.8■□□□□ 0.6
MCF2L-229ENST00000488765 ADGRB2O60241 1585 aa18.8■□□□□ 0.6
MCF2L-229ENST00000488765 CCDC172P0C7W6 258 aa18.79■□□□□ 0.6
MCF2L-229ENST00000488765 ATP1A3P13637 1013 aa18.79■□□□□ 0.6
MCF2L-229ENST00000488765 KARSQ15046 597 aaKnown RBP18.79■□□□□ 0.6
MCF2L-229ENST00000488765 STX1AQ16623 288 aa18.79■□□□□ 0.6
MCF2L-229ENST00000488765 GDAP1L1Q96MZ0 367 aa18.79■□□□□ 0.6
MCF2L-229ENST00000488765 CEP83Q9Y592 693 aa18.79■□□□□ 0.6
MCF2L-229ENST00000488765 PDILTQ8N807 584 aa18.79■□□□□ 0.6
MCF2L-229ENST00000488765 TMEM2Q9UHN6 1383 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
MCF2L-229ENST00000488765 DPCR1Q3MIW9 517 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 KIF2AO00139 706 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-229ENST00000488765 CDC25BP30305 580 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 EXOC4Q96A65 974 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 SUFUQ9UMX1 484 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 PARP3Q9Y6F1 533 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 RHOXF2BP0C7M4 288 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 ME1P48163 572 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 PPP2R3AQ06190 1150 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 FBXW10Q5XX13 1052 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 HINFPQ9BQA5 517 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 RHOXF2Q9BQY4 288 aa18.78■□□□□ 0.6
MCF2L-229ENST00000488765 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.6
MCF2L-229ENST00000488765 A0A1B0GVL5 298 aa18.77■□□□□ 0.6
MCF2L-229ENST00000488765 KINO60870 393 aaKnown RBP18.77■□□□□ 0.6
MCF2L-229ENST00000488765 BRF1Q92994 677 aa18.77■□□□□ 0.6
MCF2L-229ENST00000488765 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.6
MCF2L-229ENST00000488765 TRIM65Q6PJ69 517 aa18.77■□□□□ 0.59
MCF2L-229ENST00000488765 DESI2Q9BSY9 194 aa18.77■□□□□ 0.59
MCF2L-229ENST00000488765 OS9Q13438 667 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-229ENST00000488765 AKAP2Q9Y2D5 859 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 ELP1O95163 1332 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 EFCAB8A8MWE9 144 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 CEP57L1Q8IYX8 460 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 DNAAF4Q8WXU2 420 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
MCF2L-229ENST00000488765 CCDC158Q5M9N0 1113 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 UBXN6Q9BZV1 441 aa18.76■□□□□ 0.59
MCF2L-229ENST00000488765 FAM135BQ49AJ0 1406 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 MAP2K2P36507 400 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 SARM1Q6SZW1 724 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 PDE6BP35913 854 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 GSDMDP57764 484 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 DHX58Q96C10 678 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 FAM227BQ96M60 508 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 BRMS1Q9HCU9 246 aa18.75■□□□□ 0.59
MCF2L-229ENST00000488765 CCDC73Q6ZRK6 1079 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 FSIP1Q8NA03 581 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 PPARDQ03181 441 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 LRRC31Q6UY01 552 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 PPM1EQ8WY54 764 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 DPF2Q92785 391 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 THEMISQ8N1K5 641 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-229ENST00000488765 ANKRD20A12PQ8NF67 263 aa18.74■□□□□ 0.59
MCF2L-229ENST00000488765 MYO3AQ8NEV4 1616 aa18.73■□□□□ 0.59
MCF2L-229ENST00000488765 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-229ENST00000488765 RBM43Q6ZSC3 357 aaKnown RBP18.73■□□□□ 0.59
MCF2L-229ENST00000488765 CNNM3Q8NE01 707 aa18.73■□□□□ 0.59
MCF2L-229ENST00000488765 ANO10Q9NW15 660 aa18.73■□□□□ 0.59
MCF2L-229ENST00000488765 AATKQ6ZMQ8 1374 aa18.73■□□□□ 0.59
MCF2L-229ENST00000488765 APOBRQ0VD83 1088 aa18.73■□□□□ 0.59
MCF2L-229ENST00000488765 CNTROBQ8N137 903 aa18.73■□□□□ 0.59
MCF2L-229ENST00000488765 RBM8AQ9Y5S9 174 aaKnown RBP18.73■□□□□ 0.59
MCF2L-229ENST00000488765 NRDCO43847 1150 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 ESCO1Q5FWF5 840 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
MCF2L-229ENST00000488765 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
MCF2L-229ENST00000488765 TTC19Q6DKK2 380 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-229ENST00000488765 CCDC91Q7Z6B0 441 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms