RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 SCAND2PQ9GZW5 306 aaPredicted RBP16.86■□□□□ 0.29
ABCB1-207ENST00000488737 PAG1Q9NWQ8 432 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 CYP21A2P08686 494 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 DDX46Q7L014 1031 aaKnown RBP16.86■□□□□ 0.29
ABCB1-207ENST00000488737 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 UBAP1LF5GYI3 381 aa16.85■□□□□ 0.29
ABCB1-207ENST00000488737 TOM1O60784 492 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 A1BGP04217 495 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 ZMYM1Q5SVZ6 1142 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 CERKQ8TCT0 537 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
ABCB1-207ENST00000488737 LLPHQ9BRT6 129 aaKnown RBP16.84■□□□□ 0.29
ABCB1-207ENST00000488737 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 MYH15Q9Y2K3 1946 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 Q6ZUG5 572 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 NEUROD6Q96NK8 337 aa16.84■□□□□ 0.29
ABCB1-207ENST00000488737 GOLIM4O00461 696 aa16.83■□□□□ 0.28
ABCB1-207ENST00000488737 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
ABCB1-207ENST00000488737 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.28
ABCB1-207ENST00000488737 TRIM28Q13263 835 aaKnown RBP16.83■□□□□ 0.28
ABCB1-207ENST00000488737 ZBTB3Q9H5J0 574 aa16.83■□□□□ 0.28
ABCB1-207ENST00000488737 AHDC1Q5TGY3 1603 aaPredicted RBP16.82■□□□□ 0.28
ABCB1-207ENST00000488737 PFKFB2O60825 505 aa16.82■□□□□ 0.28
ABCB1-207ENST00000488737 STK3Q13188 491 aa16.82■□□□□ 0.28
ABCB1-207ENST00000488737 LRRFIP1Q32MZ4 808 aaKnown RBP16.82■□□□□ 0.28
ABCB1-207ENST00000488737 DHX32Q7L7V1 743 aaKnown RBP16.82■□□□□ 0.28
ABCB1-207ENST00000488737 FERMT3Q86UX7 667 aa16.82■□□□□ 0.28
ABCB1-207ENST00000488737 SMARCC2Q8TAQ2 1214 aa16.82■□□□□ 0.28
ABCB1-207ENST00000488737 CHMP4CQ96CF2 233 aa16.82■□□□□ 0.28
ABCB1-207ENST00000488737 TEX13AQ9BXU3 409 aaPredicted RBP16.82■□□□□ 0.28
ABCB1-207ENST00000488737 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
ABCB1-207ENST00000488737 ZSCAN16Q9H4T2 348 aaPredicted RBP16.82■□□□□ 0.28
ABCB1-207ENST00000488737 ABCC12Q96J65 1359 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
ABCB1-207ENST00000488737 KDM4AO75164 1064 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
ABCB1-207ENST00000488737 CCDC192P0DO97 292 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 HSP90B1P14625 803 aaKnown RBP16.81■□□□□ 0.28
ABCB1-207ENST00000488737 TIMM10P62072 90 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 GIMAP6Q6P9H5 292 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 PLA2G12BQ9BX93 195 aa16.81■□□□□ 0.28
ABCB1-207ENST00000488737 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 SPATA32Q96LK8 384 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 NUP62CLQ9H1M0 184 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 DDX19AQ9NUU7 478 aaKnown RBP16.8■□□□□ 0.28
ABCB1-207ENST00000488737 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 USP25Q9UHP3 1055 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 AKAP2Q9Y2D5 859 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 MYH7P12883 1935 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 DTNBO60941 627 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 ADCY5O95622 1261 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 CHGBP05060 677 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
ABCB1-207ENST00000488737 RESTQ13127 1097 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
ABCB1-207ENST00000488737 BRF1Q92994 677 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 KIF3AQ9Y496 699 aa16.8■□□□□ 0.28
ABCB1-207ENST00000488737 JAK2O60674 1132 aa16.79■□□□□ 0.28
ABCB1-207ENST00000488737 HMGN5P82970 282 aaKnown RBP16.79■□□□□ 0.28
ABCB1-207ENST00000488737 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
ABCB1-207ENST00000488737 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
ABCB1-207ENST00000488737 MAST3O60307 1309 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 HSPD1P10809 573 aaKnown RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 FGD1P98174 961 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 SCRN1Q12765 414 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 ZNF594Q96JF6 807 aaPredicted RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 ITGB4P16144 1822 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 ANKRD36CQ5JPF3 1778 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 ZFYP08048 801 aaPredicted RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
ABCB1-207ENST00000488737 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
ABCB1-207ENST00000488737 MYH3P11055 1940 aa16.77■□□□□ 0.28
ABCB1-207ENST00000488737 H3BQV1 296 aa16.77■□□□□ 0.27
ABCB1-207ENST00000488737 LIG1P18858 919 aa16.77■□□□□ 0.27
ABCB1-207ENST00000488737 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.27
ABCB1-207ENST00000488737 IFFO2Q5TF58 517 aa16.77■□□□□ 0.27
ABCB1-207ENST00000488737 KIF6Q6ZMV9 814 aa16.77■□□□□ 0.27
ABCB1-207ENST00000488737 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.27
ABCB1-207ENST00000488737 CFAP45Q9UL16 551 aa16.77■□□□□ 0.27
ABCB1-207ENST00000488737 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms