RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 RTL9Q8NET4 1388 aa24.71■■□□□ 1.55
GGPS1-206ENST00000488594 MLLT1Q03111 559 aaPredicted RBP24.7■■□□□ 1.55
GGPS1-206ENST00000488594 DOK7Q18PE1 504 aa24.7■■□□□ 1.55
GGPS1-206ENST00000488594 RGMBQ6NW40 437 aa24.7■■□□□ 1.55
GGPS1-206ENST00000488594 C2orf69Q8N8R5 385 aa24.7■■□□□ 1.55
GGPS1-206ENST00000488594 GBA2Q9HCG7 927 aaPredicted RBP24.7■■□□□ 1.55
GGPS1-206ENST00000488594 MBIPQ9NS73 344 aa24.7■■□□□ 1.55
GGPS1-206ENST00000488594 EGFRP00533 1210 aa24.69■■□□□ 1.54
GGPS1-206ENST00000488594 CCDC102AQ96A19 550 aa24.69■■□□□ 1.54
GGPS1-206ENST00000488594 MCOLN1Q9GZU1 580 aa24.69■■□□□ 1.54
GGPS1-206ENST00000488594 G3V3G9 751 aa24.68■■□□□ 1.54
GGPS1-206ENST00000488594 VIL1P09327 827 aaKnown RBP24.68■■□□□ 1.54
GGPS1-206ENST00000488594 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
GGPS1-206ENST00000488594 KIF4BQ2VIQ3 1234 aa24.68■■□□□ 1.54
GGPS1-206ENST00000488594 RBM26Q5T8P6 1007 aaKnown RBP24.68■■□□□ 1.54
GGPS1-206ENST00000488594 DCAF8Q5TAQ9 597 aa24.68■■□□□ 1.54
GGPS1-206ENST00000488594 KCNQ5Q9NR82 932 aa24.68■■□□□ 1.54
GGPS1-206ENST00000488594 CALD1Q05682 793 aaKnown RBP24.67■■□□□ 1.54
GGPS1-206ENST00000488594 SULF1Q8IWU6 871 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 ANKIB1Q9P2G1 1089 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 UFL1O94874 794 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 ZNF853P0CG23 659 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 CCDC152Q4G0S7 254 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 DLK2Q6UY11 383 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 CCDC191Q8NCU4 936 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 ZIC5Q96T25 663 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 SAGE1Q9NXZ1 904 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 GGA1Q9UJY5 639 aa24.67■■□□□ 1.54
GGPS1-206ENST00000488594 FAM155AB1AL88 458 aaPredicted RBP24.66■■□□□ 1.54
GGPS1-206ENST00000488594 ADM5C9JUS6 153 aa24.66■■□□□ 1.54
GGPS1-206ENST00000488594 CHMP4AQ9BY43 222 aa24.66■■□□□ 1.54
GGPS1-206ENST00000488594 IFT57Q9NWB7 429 aa24.66■■□□□ 1.54
GGPS1-206ENST00000488594 COL4A1P02462 1669 aa24.65■■□□□ 1.54
GGPS1-206ENST00000488594 PCCAP05165 728 aaPredicted RBP24.65■■□□□ 1.54
GGPS1-206ENST00000488594 DGKZQ13574 1117 aa24.65■■□□□ 1.54
GGPS1-206ENST00000488594 SEC31BQ9NQW1 1179 aa24.65■■□□□ 1.54
GGPS1-206ENST00000488594 GGA3Q9NZ52 723 aa24.65■■□□□ 1.54
GGPS1-206ENST00000488594 ZNF609O15014 1411 aa24.64■■□□□ 1.54
GGPS1-206ENST00000488594 PDE8AO60658 829 aa24.64■■□□□ 1.53
GGPS1-206ENST00000488594 ZNF157P51786 506 aaPredicted RBP24.64■■□□□ 1.53
GGPS1-206ENST00000488594 GNAI1P63096 354 aa24.64■■□□□ 1.53
GGPS1-206ENST00000488594 AGBL3Q8NEM8 1001 aa24.64■■□□□ 1.53
GGPS1-206ENST00000488594 MYD88Q99836 296 aa24.64■■□□□ 1.53
GGPS1-206ENST00000488594 PHAXQ9H814 394 aaKnown RBP24.64■■□□□ 1.53
GGPS1-206ENST00000488594 ZNF280AP59817 542 aaPredicted RBP24.63■■□□□ 1.53
GGPS1-206ENST00000488594 CWC25Q9NXE8 425 aaPredicted RBP24.63■■□□□ 1.53
GGPS1-206ENST00000488594 DDX58O95786 925 aaKnown RBP24.62■■□□□ 1.53
GGPS1-206ENST00000488594 RSBN1LQ6PCB5 846 aaPredicted RBP24.62■■□□□ 1.53
GGPS1-206ENST00000488594 KIF23Q02241 960 aaPredicted RBP24.61■■□□□ 1.53
GGPS1-206ENST00000488594 XDHP47989 1333 aa24.61■■□□□ 1.53
GGPS1-206ENST00000488594 ANKRD18AQ8IVF6 992 aa24.6■■□□□ 1.53
GGPS1-206ENST00000488594 CDCA5Q96FF9 252 aa24.6■■□□□ 1.53
GGPS1-206ENST00000488594 CASP8AP2Q9UKL3 1982 aa24.6■■□□□ 1.53
GGPS1-206ENST00000488594 ELL2O00472 640 aaPredicted RBP24.59■■□□□ 1.53
GGPS1-206ENST00000488594 SLC10A3P09131 477 aa24.59■■□□□ 1.53
GGPS1-206ENST00000488594 REM2Q8IYK8 340 aaPredicted RBP24.59■■□□□ 1.53
GGPS1-206ENST00000488594 METTL22Q9BUU2 404 aaPredicted RBP24.59■■□□□ 1.53
GGPS1-206ENST00000488594 APAF1O14727 1248 aa24.58■■□□□ 1.53
GGPS1-206ENST00000488594 ATP2B4P23634 1241 aa24.58■■□□□ 1.53
GGPS1-206ENST00000488594 FKBP1BP68106 108 aa24.58■■□□□ 1.53
GGPS1-206ENST00000488594 CCDC30Q5VVM6 783 aa24.58■■□□□ 1.53
GGPS1-206ENST00000488594 PODNQ7Z5L7 613 aa24.58■■□□□ 1.53
GGPS1-206ENST00000488594 ASTN2O75129 1339 aaPredicted RBP24.57■■□□□ 1.52
GGPS1-206ENST00000488594 SCN9AQ15858 1988 aa24.57■■□□□ 1.52
GGPS1-206ENST00000488594 SLC34A2O95436 690 aa24.57■■□□□ 1.52
GGPS1-206ENST00000488594 USP17L8P0C7I0 530 aa24.57■■□□□ 1.52
GGPS1-206ENST00000488594 SCARF1Q14162 830 aa24.57■■□□□ 1.52
GGPS1-206ENST00000488594 ANGEL2Q5VTE6 544 aaKnown RBP24.57■■□□□ 1.52
GGPS1-206ENST00000488594 CDC5LQ99459 802 aaKnown RBP24.57■■□□□ 1.52
GGPS1-206ENST00000488594 RNF186Q9NXI6 227 aa24.57■■□□□ 1.52
GGPS1-206ENST00000488594 PITPNM2Q9BZ72 1349 aa24.56■■□□□ 1.52
GGPS1-206ENST00000488594 CCDC85AQ96PX6 553 aaPredicted RBP24.56■■□□□ 1.52
GGPS1-206ENST00000488594 GMLQ99445 158 aa24.56■■□□□ 1.52
GGPS1-206ENST00000488594 USP17L3A6NCW0 530 aa24.55■■□□□ 1.52
GGPS1-206ENST00000488594 USP17L4A6NCW7 530 aa24.55■■□□□ 1.52
GGPS1-206ENST00000488594 USP17L1Q7RTZ2 530 aa24.55■■□□□ 1.52
GGPS1-206ENST00000488594 C8orf58Q8NAV2 365 aa24.55■■□□□ 1.52
GGPS1-206ENST00000488594 PRKRIP1Q9H875 184 aaPredicted RBP24.55■■□□□ 1.52
GGPS1-206ENST00000488594 MYOZ2Q9NPC6 264 aa24.55■■□□□ 1.52
GGPS1-206ENST00000488594 POLR2AP24928 1970 aaKnown RBP24.55■■□□□ 1.52
GGPS1-206ENST00000488594 TRPA1O75762 1119 aa24.54■■□□□ 1.52
GGPS1-206ENST00000488594 CTSWP56202 376 aa24.54■■□□□ 1.52
GGPS1-206ENST00000488594 JARID2Q92833 1246 aaPredicted RBP24.54■■□□□ 1.52
GGPS1-206ENST00000488594 CSRNP1Q96S65 589 aa24.54■■□□□ 1.52
GGPS1-206ENST00000488594 MAP3K2Q9Y2U5 619 aa24.54■■□□□ 1.52
GGPS1-206ENST00000488594 KSR2Q6VAB6 950 aa24.52■■□□□ 1.52
GGPS1-206ENST00000488594 RASAL3Q86YV0 1011 aa24.52■■□□□ 1.52
GGPS1-206ENST00000488594 BSDC1Q9NW68 430 aaPredicted RBP24.52■■□□□ 1.52
GGPS1-206ENST00000488594 MED23Q9ULK4 1368 aa24.51■■□□□ 1.51
GGPS1-206ENST00000488594 NEXNQ0ZGT2 675 aa24.51■■□□□ 1.51
GGPS1-206ENST00000488594 OGFOD1Q8N543 542 aa24.5■■□□□ 1.51
GGPS1-206ENST00000488594 TTLL11Q8NHH1 800 aa24.5■■□□□ 1.51
GGPS1-206ENST00000488594 PAPPA2Q9BXP8 1791 aa24.5■■□□□ 1.51
GGPS1-206ENST00000488594 PSME4Q14997 1843 aa24.49■■□□□ 1.51
GGPS1-206ENST00000488594 MYO3BQ8WXR4 1341 aa24.49■■□□□ 1.51
GGPS1-206ENST00000488594 PI4KAP2A4QPH2 592 aa24.49■■□□□ 1.51
GGPS1-206ENST00000488594 PI4KAP1Q8N8J0 262 aa24.49■■□□□ 1.51
GGPS1-206ENST00000488594 MINPP1Q9UNW1 487 aa24.49■■□□□ 1.51
GGPS1-206ENST00000488594 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
GGPS1-206ENST00000488594 MMP14P50281 582 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms