RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
ITGB1-215ENST00000488494 XDHP47989 1333 aa22.55■■□□□ 1.2
ITGB1-215ENST00000488494 SLC4A10Q6U841 1118 aa22.54■■□□□ 1.2
ITGB1-215ENST00000488494 DNAJC5GQ8N7S2 189 aa22.54■■□□□ 1.2
ITGB1-215ENST00000488494 GPRC5DQ9NZD1 345 aa22.54■■□□□ 1.2
ITGB1-215ENST00000488494 ECE2O60344 883 aa22.53■■□□□ 1.2
ITGB1-215ENST00000488494 TNIP1Q15025 636 aa22.53■■□□□ 1.2
ITGB1-215ENST00000488494 MRPL50Q8N5N7 158 aaKnown RBP22.53■■□□□ 1.2
ITGB1-215ENST00000488494 ITGA6P23229 1130 aa22.52■■□□□ 1.2
ITGB1-215ENST00000488494 DOK7Q18PE1 504 aa22.52■■□□□ 1.2
ITGB1-215ENST00000488494 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
ITGB1-215ENST00000488494 BCL2L13Q9BXK5 485 aa22.52■■□□□ 1.2
ITGB1-215ENST00000488494 BSDC1Q9NW68 430 aaPredicted RBP22.52■■□□□ 1.2
ITGB1-215ENST00000488494 GRM8O00222 908 aa22.51■■□□□ 1.19
ITGB1-215ENST00000488494 MAP1SQ66K74 1059 aaPredicted RBP22.51■■□□□ 1.19
ITGB1-215ENST00000488494 SSH1Q8WYL5 1049 aa22.51■■□□□ 1.19
ITGB1-215ENST00000488494 PASKQ96RG2 1323 aa22.51■■□□□ 1.19
ITGB1-215ENST00000488494 ALDH1L1O75891 902 aa22.5■■□□□ 1.19
ITGB1-215ENST00000488494 CSF1RP07333 972 aa22.5■■□□□ 1.19
ITGB1-215ENST00000488494 IGHMBP2P38935 993 aaKnown RBP22.5■■□□□ 1.19
ITGB1-215ENST00000488494 MIER1Q8N108 512 aa22.5■■□□□ 1.19
ITGB1-215ENST00000488494 KLRG1Q96E93 195 aa22.5■■□□□ 1.19
ITGB1-215ENST00000488494 ZC3H12CQ9C0D7 883 aaKnown RBP22.5■■□□□ 1.19
ITGB1-215ENST00000488494 SRCIN1Q9C0H9 1055 aa22.5■■□□□ 1.19
ITGB1-215ENST00000488494 PSMD14O00487 310 aa22.49■■□□□ 1.19
ITGB1-215ENST00000488494 ADARB2Q9NS39 739 aaKnown RBP22.49■■□□□ 1.19
ITGB1-215ENST00000488494 MINPP1Q9UNW1 487 aa22.49■■□□□ 1.19
ITGB1-215ENST00000488494 PTPRCP08575 1304 aa22.49■■□□□ 1.19
ITGB1-215ENST00000488494 SCN9AQ15858 1988 aa22.49■■□□□ 1.19
ITGB1-215ENST00000488494 ATP2B4P23634 1241 aa22.48■■□□□ 1.19
ITGB1-215ENST00000488494 FOXO4P98177 505 aa22.48■■□□□ 1.19
ITGB1-215ENST00000488494 USP50Q70EL3 339 aaPredicted RBP22.48■■□□□ 1.19
ITGB1-215ENST00000488494 TRMT2AQ8IZ69 625 aaKnown RBP22.48■■□□□ 1.19
ITGB1-215ENST00000488494 C9orf78Q9NZ63 289 aaPredicted RBP22.48■■□□□ 1.19
ITGB1-215ENST00000488494 CHMP3Q9Y3E7 222 aa22.48■■□□□ 1.19
ITGB1-215ENST00000488494 SHTN1A0MZ66 631 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 G3V3G9 751 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 ITGBL1O95965 494 aaPredicted RBP22.47■■□□□ 1.19
ITGB1-215ENST00000488494 EPHA10Q5JZY3 1008 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 DCAF8Q5TAQ9 597 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 MPHOSPH8Q99549 860 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 KCNQ5Q9NR82 932 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 CREBZFQ9NS37 354 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 SMC4Q9NTJ3 1288 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
ITGB1-215ENST00000488494 MED23Q9ULK4 1368 aa22.47■■□□□ 1.19
ITGB1-215ENST00000488494 A0A1B0GUL6 1792 aa22.46■■□□□ 1.19
ITGB1-215ENST00000488494 ANKRD18BA2A2Z9 1011 aa22.46■■□□□ 1.19
ITGB1-215ENST00000488494 WTIPA6NIX2 430 aaPredicted RBP22.46■■□□□ 1.19
ITGB1-215ENST00000488494 MICALL2Q8IY33 904 aa22.46■■□□□ 1.19
ITGB1-215ENST00000488494 CCT4P50991 539 aaKnown RBP22.45■■□□□ 1.18
ITGB1-215ENST00000488494 IFIT5Q13325 482 aaKnown RBP22.45■■□□□ 1.18
ITGB1-215ENST00000488494 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.18
ITGB1-215ENST00000488494 LMBR1LQ6UX01 489 aa22.45■■□□□ 1.18
ITGB1-215ENST00000488494 TRPM4Q8TD43 1214 aa22.45■■□□□ 1.18
ITGB1-215ENST00000488494 PSME4Q14997 1843 aa22.45■■□□□ 1.18
ITGB1-215ENST00000488494 CNOT7Q9UIV1 285 aaKnown RBP22.44■■□□□ 1.18
ITGB1-215ENST00000488494 SUCLG2Q96I99 432 aa22.43■■□□□ 1.18
ITGB1-215ENST00000488494 CT47B1P0C2W7 299 aaPredicted RBP22.42■■□□□ 1.18
ITGB1-215ENST00000488494 NBPF7P0C2Y1 421 aaPredicted RBP22.42■■□□□ 1.18
ITGB1-215ENST00000488494 RPS12P25398 132 aaKnown RBP22.42■■□□□ 1.18
ITGB1-215ENST00000488494 DPF2Q92785 391 aa22.42■■□□□ 1.18
ITGB1-215ENST00000488494 ANKRD2Q9GZV1 360 aa22.42■■□□□ 1.18
ITGB1-215ENST00000488494 ZNF609O15014 1411 aa22.41■■□□□ 1.18
ITGB1-215ENST00000488494 UTYO14607 1347 aa22.41■■□□□ 1.18
ITGB1-215ENST00000488494 TMEM88BA6NKF7 163 aa22.41■■□□□ 1.18
ITGB1-215ENST00000488494 H7C1D1 291 aa22.41■■□□□ 1.18
ITGB1-215ENST00000488494 CHRNDQ07001 517 aa22.41■■□□□ 1.18
ITGB1-215ENST00000488494 JMYQ8N9B5 988 aa22.41■■□□□ 1.18
ITGB1-215ENST00000488494 ZNF804BA4D1E1 1349 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 VIL1P09327 827 aaKnown RBP22.4■■□□□ 1.18
ITGB1-215ENST00000488494 KLRK1P26718 216 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 KCNJ4P48050 445 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 HIRAP54198 1017 aaPredicted RBP22.4■■□□□ 1.18
ITGB1-215ENST00000488494 CCDC57Q2TAC2 916 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 MKRN1Q9UHC7 482 aaKnown RBP22.4■■□□□ 1.18
ITGB1-215ENST00000488494 LEMD3Q9Y2U8 911 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 ZNF646O15015 1829 aaPredicted RBP22.4■■□□□ 1.18
ITGB1-215ENST00000488494 PCNTO95613 3336 aa22.4■■□□□ 1.18
ITGB1-215ENST00000488494 TRAF5O00463 557 aa22.39■■□□□ 1.17
ITGB1-215ENST00000488494 FMR1Q06787 632 aaKnown RBP eCLIP22.39■■□□□ 1.17
ITGB1-215ENST00000488494 SAMD7Q7Z3H4 446 aa22.39■■□□□ 1.17
ITGB1-215ENST00000488494 KAZALD1Q96I82 304 aa22.39■■□□□ 1.17
ITGB1-215ENST00000488494 ZNF594Q96JF6 807 aaPredicted RBP22.39■■□□□ 1.17
ITGB1-215ENST00000488494 CNTNAP1P78357 1384 aa22.38■■□□□ 1.17
ITGB1-215ENST00000488494 EGFRP00533 1210 aa22.38■■□□□ 1.17
ITGB1-215ENST00000488494 TBC1D10BQ4KMP7 808 aaPredicted RBP22.38■■□□□ 1.17
ITGB1-215ENST00000488494 RSBN1LQ6PCB5 846 aaPredicted RBP22.38■■□□□ 1.17
ITGB1-215ENST00000488494 TXNRD3Q86VQ6 643 aa22.38■■□□□ 1.17
ITGB1-215ENST00000488494 USP17L3A6NCW0 530 aa22.37■■□□□ 1.17
ITGB1-215ENST00000488494 USP17L4A6NCW7 530 aa22.37■■□□□ 1.17
ITGB1-215ENST00000488494 USP17L1Q7RTZ2 530 aa22.37■■□□□ 1.17
ITGB1-215ENST00000488494 PODNQ7Z5L7 613 aa22.37■■□□□ 1.17
ITGB1-215ENST00000488494 HELBQ8NG08 1087 aaPredicted RBP22.37■■□□□ 1.17
ITGB1-215ENST00000488494 BICC1Q9H694 974 aaKnown RBP22.37■■□□□ 1.17
ITGB1-215ENST00000488494 TAF5LO75529 589 aa22.36■■□□□ 1.17
ITGB1-215ENST00000488494 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
ITGB1-215ENST00000488494 ZC3H15Q8WU90 426 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms