RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 RGPD2P0DJD1 1756 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 MYOM1P52179 1685 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 PEAK1Q9H792 1746 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 AXIN1O15169 862 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 APBA3O96018 575 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 ADD1P35611 737 aaKnown RBP8.24□□□□□ -1.09
CDHR3-213ENST00000488386 TMF1P82094 1093 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
CDHR3-213ENST00000488386 DDB1Q16531 1140 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 SLFNL1Q499Z3 407 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 FAM196AQ6ZSG2 479 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 THRAP3Q9Y2W1 955 aaKnown RBP8.24□□□□□ -1.09
CDHR3-213ENST00000488386 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
CDHR3-213ENST00000488386 R3HDM1Q15032 1099 aaKnown RBP8.23□□□□□ -1.09
CDHR3-213ENST00000488386 RRS1Q15050 365 aaKnown RBP8.23□□□□□ -1.09
CDHR3-213ENST00000488386 TRIM46Q7Z4K8 759 aa8.23□□□□□ -1.09
CDHR3-213ENST00000488386 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
CDHR3-213ENST00000488386 ANKRD24Q8TF21 1146 aa8.23□□□□□ -1.09
CDHR3-213ENST00000488386 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
CDHR3-213ENST00000488386 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
CDHR3-213ENST00000488386 KIF20BQ96Q89 1820 aa8.23□□□□□ -1.09
CDHR3-213ENST00000488386 NUP188Q5SRE5 1749 aa8.23□□□□□ -1.09
CDHR3-213ENST00000488386 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 DISP2A7MBM2 1401 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 TBC1D9Q6ZT07 1266 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 MEIOBQ8N635 442 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 COG3Q96JB2 828 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 CALR3Q96L12 384 aaKnown RBP8.22□□□□□ -1.09
CDHR3-213ENST00000488386 CAMKK2Q96RR4 588 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
CDHR3-213ENST00000488386 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.09
CDHR3-213ENST00000488386 RREB1Q92766 1687 aa8.21□□□□□ -1.09
CDHR3-213ENST00000488386 FYB1O15117 783 aa8.21□□□□□ -1.1
CDHR3-213ENST00000488386 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
CDHR3-213ENST00000488386 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.1
CDHR3-213ENST00000488386 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.1
CDHR3-213ENST00000488386 DOLKQ9UPQ8 538 aa8.21□□□□□ -1.1
CDHR3-213ENST00000488386 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
CDHR3-213ENST00000488386 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 HSPA5P11021 654 aaKnown RBP8.2□□□□□ -1.1
CDHR3-213ENST00000488386 SKIP12755 728 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 HOXC9P31274 260 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 Q6ZVU0 165 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 USHBP1Q8N6Y0 703 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 KDF1Q8NAX2 398 aaPredicted RBP8.2□□□□□ -1.1
CDHR3-213ENST00000488386 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 CCDC7Q96M83 1385 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 NINLQ9Y2I6 1382 aa8.2□□□□□ -1.1
CDHR3-213ENST00000488386 ABCC6O95255 1503 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 EXOC5O00471 708 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 KCNQ2O43526 872 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 AMPHP49418 695 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 DEPDC4Q8N2C3 294 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 IP6K1Q92551 441 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 ATP13A2Q9NQ11 1180 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 CLSPNQ9HAW4 1339 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 TNS2Q63HR2 1409 aa8.19□□□□□ -1.1
CDHR3-213ENST00000488386 FAM208AQ9UK61 1670 aaKnown RBP8.18□□□□□ -1.1
CDHR3-213ENST00000488386 USP17L5A8MUK1 530 aa8.18□□□□□ -1.1
CDHR3-213ENST00000488386 C11orf95C9JLR9 678 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-213ENST00000488386 ADH1AP07327 375 aa8.18□□□□□ -1.1
CDHR3-213ENST00000488386 IL2RBP14784 551 aa8.18□□□□□ -1.1
CDHR3-213ENST00000488386 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
CDHR3-213ENST00000488386 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
CDHR3-213ENST00000488386 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
CDHR3-213ENST00000488386 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 POTECB2RU33 542 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 TNNT2P45379 298 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-213ENST00000488386 NCOA4Q13772 614 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 HSP90AB2PQ58FF8 381 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 LINC00528Q8N1L1 170 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 NFATC2IPQ8NCF5 419 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 DDX54Q8TDD1 881 aaKnown RBP8.17□□□□□ -1.1
CDHR3-213ENST00000488386 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
CDHR3-213ENST00000488386 MEGF6O75095 1541 aa8.17□□□□□ -1.1
CDHR3-213ENST00000488386 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 PALM3A6NDB9 673 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-213ENST00000488386 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-213ENST00000488386 ATP9BO43861 1147 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 LRP5O75197 1615 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
CDHR3-213ENST00000488386 RELBQ01201 579 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 CDCA8Q53HL2 280 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 C6orf118Q5T5N4 469 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 NBPF6Q5VWK0 638 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 USP17L2Q6R6M4 530 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 NHSQ6T4R5 1651 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 NBPF4Q96M43 638 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 PPP1R12CQ9BZL4 782 aa8.16□□□□□ -1.1
CDHR3-213ENST00000488386 PDGFDQ9GZP0 370 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-213ENST00000488386 GMPR2Q9P2T1 348 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms