RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 NBPF5PQ86XG9 351 aaPredicted RBP15.06■□□□□ 0
HLA-DOB-209ENST00000488325 XAGE3Q8WTP9 111 aa15.06■□□□□ 0
HLA-DOB-209ENST00000488325 RNF186Q9NXI6 227 aa15.06■□□□□ 0
HLA-DOB-209ENST00000488325 GPRC5DQ9NZD1 345 aa15.06■□□□□ 0
HLA-DOB-209ENST00000488325 ALDH1L1O75891 902 aa15.05■□□□□ -0
HLA-DOB-209ENST00000488325 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
HLA-DOB-209ENST00000488325 AIMP1Q12904 312 aaKnown RBP15.05■□□□□ -0
HLA-DOB-209ENST00000488325 RIC3Q7Z5B4 369 aa15.05■□□□□ -0
HLA-DOB-209ENST00000488325 HDAC5Q9UQL6 1122 aa15.05■□□□□ -0
HLA-DOB-209ENST00000488325 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
HLA-DOB-209ENST00000488325 FAM155AB1AL88 458 aaPredicted RBP15.04■□□□□ -0
HLA-DOB-209ENST00000488325 KIF23Q02241 960 aaPredicted RBP15.04■□□□□ -0
HLA-DOB-209ENST00000488325 NEXNQ0ZGT2 675 aa15.04■□□□□ -0
HLA-DOB-209ENST00000488325 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
HLA-DOB-209ENST00000488325 BEND3Q5T5X7 828 aa15.04■□□□□ -0
HLA-DOB-209ENST00000488325 COPS6Q7L5N1 327 aa15.04■□□□□ -0
HLA-DOB-209ENST00000488325 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
HLA-DOB-209ENST00000488325 MEIS3Q99687 375 aa15.04■□□□□ -0
HLA-DOB-209ENST00000488325 PGAP2Q9UHJ9 254 aa15.04■□□□□ -0
HLA-DOB-209ENST00000488325 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
HLA-DOB-209ENST00000488325 IGHDP01880 384 aa15.03■□□□□ -0
HLA-DOB-209ENST00000488325 GNAI2P04899 355 aa15.03■□□□□ -0
HLA-DOB-209ENST00000488325 ALDH1B1P30837 517 aa15.03■□□□□ -0
HLA-DOB-209ENST00000488325 ANKRD13DQ6ZTN6 518 aa15.03■□□□□ -0
HLA-DOB-209ENST00000488325 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
HLA-DOB-209ENST00000488325 RPAP2Q8IXW5 612 aaPredicted RBP15.03■□□□□ -0
HLA-DOB-209ENST00000488325 DLL1O00548 723 aa15.02■□□□□ -0
HLA-DOB-209ENST00000488325 A1BGP04217 495 aa15.02■□□□□ -0
HLA-DOB-209ENST00000488325 UBTFL1P0CB47 393 aaPredicted RBP15.02■□□□□ -0
HLA-DOB-209ENST00000488325 RGMBQ6NW40 437 aa15.02■□□□□ -0
HLA-DOB-209ENST00000488325 NPM2Q86SE8 214 aaKnown RBP15.02■□□□□ -0
HLA-DOB-209ENST00000488325 LINS1Q8NG48 757 aa15.02■□□□□ -0
HLA-DOB-209ENST00000488325 PLBD2Q8NHP8 589 aa15.02■□□□□ -0
HLA-DOB-209ENST00000488325 C1orf115Q9H7X2 142 aa15.02■□□□□ -0
HLA-DOB-209ENST00000488325 MKI67P46013 3256 aaKnown RBP15.02□□□□□ -0.01
HLA-DOB-209ENST00000488325 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 HMMRO75330 724 aa15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 PKN2Q16513 984 aaKnown RBP15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 NBPF10Q6P3W6 841 aaKnown RBP15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 CDC37L1Q7L3B6 337 aa15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 ANKRD44Q8N8A2 993 aa15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 METTL22Q9BUU2 404 aaPredicted RBP15.01□□□□□ -0.01
HLA-DOB-209ENST00000488325 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
HLA-DOB-209ENST00000488325 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
HLA-DOB-209ENST00000488325 CC2D2BQ6DHV5 1058 aa15□□□□□ -0.01
HLA-DOB-209ENST00000488325 NIM1KQ8IY84 436 aa15□□□□□ -0.01
HLA-DOB-209ENST00000488325 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
HLA-DOB-209ENST00000488325 CCDC102AQ96A19 550 aa15□□□□□ -0.01
HLA-DOB-209ENST00000488325 GMPSP49915 693 aaPredicted RBP14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 HIRAP54198 1017 aaPredicted RBP14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 TPTE2Q6XPS3 522 aa14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
HLA-DOB-209ENST00000488325 ZNF157P51786 506 aaPredicted RBP14.98□□□□□ -0.01
HLA-DOB-209ENST00000488325 DLK2Q6UY11 383 aa14.98□□□□□ -0.01
HLA-DOB-209ENST00000488325 USP48Q86UV5 1035 aa14.98□□□□□ -0.01
HLA-DOB-209ENST00000488325 CSRNP1Q96S65 589 aa14.98□□□□□ -0.01
HLA-DOB-209ENST00000488325 MYD88Q99836 296 aa14.98□□□□□ -0.01
HLA-DOB-209ENST00000488325 FAM177BA6PVY3 158 aa14.97□□□□□ -0.01
HLA-DOB-209ENST00000488325 CLEC4GQ6UXB4 293 aa14.97□□□□□ -0.01
HLA-DOB-209ENST00000488325 TRPM4Q8TD43 1214 aa14.97□□□□□ -0.01
HLA-DOB-209ENST00000488325 HDAC9Q9UKV0 1011 aa14.97□□□□□ -0.01
HLA-DOB-209ENST00000488325 NEURL1BA8MQ27 555 aa14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 PPIP5K2O43314 1243 aa14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 CXCL9Q07325 125 aa14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 TTLL7Q6ZT98 887 aa14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 SLC51AQ86UW1 340 aa14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 ZNF652Q9Y2D9 606 aa14.96□□□□□ -0.01
HLA-DOB-209ENST00000488325 UTYO14607 1347 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 GRM8O00222 908 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 IGKV5-2P06315 115 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 SLC10A3P09131 477 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 CWF19L2Q2TBE0 894 aaKnown RBP14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 GRIPAP1Q4V328 841 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 HSP90AB3PQ58FF7 597 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 SIRT2Q8IXJ6 389 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 C2orf69Q8N8R5 385 aa14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 NIP7Q9Y221 180 aaKnown RBP eCLIP14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 LRRFIP2Q9Y608 721 aaKnown RBP14.95□□□□□ -0.02
HLA-DOB-209ENST00000488325 CDHR2Q9BYE9 1310 aa14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 GCKRQ14397 625 aa14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 AOC3Q16853 763 aa14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 CRY2Q49AN0 593 aa14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 FBXO46Q6PJ61 603 aaPredicted RBP14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 CUL9Q8IWT3 2517 aa14.94□□□□□ -0.02
HLA-DOB-209ENST00000488325 MAP3K15Q6ZN16 1313 aa14.93□□□□□ -0.02
HLA-DOB-209ENST00000488325 A0A0C4DFX4 3053 aa14.93□□□□□ -0.02
HLA-DOB-209ENST00000488325 ZBTB3Q9H5J0 574 aa14.93□□□□□ -0.02
HLA-DOB-209ENST00000488325 DCTPP1Q9H773 170 aa14.93□□□□□ -0.02
HLA-DOB-209ENST00000488325 ZNRF3Q9ULT6 936 aa14.93□□□□□ -0.02
HLA-DOB-209ENST00000488325 SZT2Q5T011 3432 aa14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 ERVV-1B6SEH8 477 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms