RNA–Protein interactions for RNA: ENST00000488216.5

RBM3-207, Transcript of RNA binding motif protein 3, humanhuman

TSL 3

Gene RBM3, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-207ENST00000488216 NECTIN2Q92692 538 aa20.56■□□□□ 0.88
RBM3-207ENST00000488216 TCIRG1Q13488 830 aa20.55■□□□□ 0.88
RBM3-207ENST00000488216 ANGEL2Q5VTE6 544 aaKnown RBP20.55■□□□□ 0.88
RBM3-207ENST00000488216 EYA3Q99504 573 aa20.55■□□□□ 0.88
RBM3-207ENST00000488216 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
RBM3-207ENST00000488216 GCC1Q96CN9 775 aa20.53■□□□□ 0.88
RBM3-207ENST00000488216 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
RBM3-207ENST00000488216 COL4A1P02462 1669 aa20.53■□□□□ 0.88
RBM3-207ENST00000488216 PAPPA2Q9BXP8 1791 aa20.52■□□□□ 0.88
RBM3-207ENST00000488216 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
RBM3-207ENST00000488216 FKBP1BP68106 108 aa20.52■□□□□ 0.88
RBM3-207ENST00000488216 SCARF1Q14162 830 aa20.52■□□□□ 0.88
RBM3-207ENST00000488216 MOB2Q70IA6 237 aa20.52■□□□□ 0.88
RBM3-207ENST00000488216 TBC1D16Q8TBP0 767 aa20.52■□□□□ 0.88
RBM3-207ENST00000488216 MAPK8IP3Q9UPT6 1336 aa20.51■□□□□ 0.87
RBM3-207ENST00000488216 G3V3G9 751 aa20.5■□□□□ 0.87
RBM3-207ENST00000488216 DCAF8Q5TAQ9 597 aa20.5■□□□□ 0.87
RBM3-207ENST00000488216 FBXO46Q6PJ61 603 aaPredicted RBP20.5■□□□□ 0.87
RBM3-207ENST00000488216 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
RBM3-207ENST00000488216 ZC3H12CQ9C0D7 883 aaKnown RBP20.5■□□□□ 0.87
RBM3-207ENST00000488216 SCAF8Q9UPN6 1271 aaKnown RBP20.5■□□□□ 0.87
RBM3-207ENST00000488216 SCN9AQ15858 1988 aa20.49■□□□□ 0.87
RBM3-207ENST00000488216 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
RBM3-207ENST00000488216 GPR25O00155 361 aa20.49■□□□□ 0.87
RBM3-207ENST00000488216 ZNF280AP59817 542 aaPredicted RBP20.49■□□□□ 0.87
RBM3-207ENST00000488216 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
RBM3-207ENST00000488216 MKRN3Q13064 507 aaKnown RBP20.48■□□□□ 0.87
RBM3-207ENST00000488216 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
RBM3-207ENST00000488216 UFL1O94874 794 aa20.47■□□□□ 0.87
RBM3-207ENST00000488216 HABP4Q5JVS0 413 aaKnown RBP20.47■□□□□ 0.87
RBM3-207ENST00000488216 RSBN1LQ6PCB5 846 aaPredicted RBP20.47■□□□□ 0.87
RBM3-207ENST00000488216 ATP5J2-PTCD1G3V325 749 aa20.46■□□□□ 0.87
RBM3-207ENST00000488216 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
RBM3-207ENST00000488216 TTLL12Q14166 644 aaPredicted RBP20.46■□□□□ 0.87
RBM3-207ENST00000488216 PRAMEF18Q5VWM3 479 aa20.46■□□□□ 0.87
RBM3-207ENST00000488216 AGBL3Q8NEM8 1001 aa20.46■□□□□ 0.87
RBM3-207ENST00000488216 MYOZ2Q9NPC6 264 aa20.46■□□□□ 0.87
RBM3-207ENST00000488216 ANKIB1Q9P2G1 1089 aa20.45■□□□□ 0.86
RBM3-207ENST00000488216 PITPNM2Q9BZ72 1349 aa20.45■□□□□ 0.86
RBM3-207ENST00000488216 ZNF609O15014 1411 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 FKTNO75072 461 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 USP17L8P0C7I0 530 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 TM4SF4P48230 202 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
RBM3-207ENST00000488216 ISCA1Q9BUE6 129 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 CHPF2Q9P2E5 772 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 GGA1Q9UJY5 639 aa20.44■□□□□ 0.86
RBM3-207ENST00000488216 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
RBM3-207ENST00000488216 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
RBM3-207ENST00000488216 PLBD2Q8NHP8 589 aa20.43■□□□□ 0.86
RBM3-207ENST00000488216 R3HDMLQ9H3Y0 253 aa20.43■□□□□ 0.86
RBM3-207ENST00000488216 RIPK4P57078 832 aa20.42■□□□□ 0.86
RBM3-207ENST00000488216 SREBF2Q12772 1141 aa20.42■□□□□ 0.86
RBM3-207ENST00000488216 GMLQ99445 158 aa20.42■□□□□ 0.86
RBM3-207ENST00000488216 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
RBM3-207ENST00000488216 SEC31BQ9NQW1 1179 aa20.42■□□□□ 0.86
RBM3-207ENST00000488216 BABAM1Q9NWV8 329 aa20.42■□□□□ 0.86
RBM3-207ENST00000488216 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
RBM3-207ENST00000488216 NBPF9Q3BBW0 867 aa20.4■□□□□ 0.86
RBM3-207ENST00000488216 POTEFA5A3E0 1075 aa20.39■□□□□ 0.85
RBM3-207ENST00000488216 USP17L3A6NCW0 530 aa20.39■□□□□ 0.85
RBM3-207ENST00000488216 USP17L4A6NCW7 530 aa20.39■□□□□ 0.85
RBM3-207ENST00000488216 NF2P35240 595 aa20.39■□□□□ 0.85
RBM3-207ENST00000488216 USP17L1Q7RTZ2 530 aa20.39■□□□□ 0.85
RBM3-207ENST00000488216 PRKG1Q13976 671 aa20.38■□□□□ 0.85
RBM3-207ENST00000488216 HDGFL1Q5TGJ6 251 aa20.38■□□□□ 0.85
RBM3-207ENST00000488216 CFHR5Q9BXR6 569 aa20.38■□□□□ 0.85
RBM3-207ENST00000488216 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
RBM3-207ENST00000488216 TRIM17Q9Y577 477 aa20.37■□□□□ 0.85
RBM3-207ENST00000488216 PSME4Q14997 1843 aa20.37■□□□□ 0.85
RBM3-207ENST00000488216 CCDC85AQ96PX6 553 aaPredicted RBP20.36■□□□□ 0.85
RBM3-207ENST00000488216 MXD3Q9BW11 206 aa20.36■□□□□ 0.85
RBM3-207ENST00000488216 XDHP47989 1333 aa20.35■□□□□ 0.85
RBM3-207ENST00000488216 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
RBM3-207ENST00000488216 ARMC9Q7Z3E5 817 aa20.35■□□□□ 0.85
RBM3-207ENST00000488216 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
RBM3-207ENST00000488216 WNT10BO00744 389 aa20.34■□□□□ 0.85
RBM3-207ENST00000488216 SASH1O94885 1247 aa20.34■□□□□ 0.85
RBM3-207ENST00000488216 FXR1P51114 621 aaKnown RBP eCLIP20.34■□□□□ 0.85
RBM3-207ENST00000488216 TRIM28Q13263 835 aaKnown RBP20.34■□□□□ 0.85
RBM3-207ENST00000488216 SPRYD7Q5W111 196 aa20.34■□□□□ 0.85
RBM3-207ENST00000488216 INTS3Q68E01 1043 aaKnown RBP20.34■□□□□ 0.85
RBM3-207ENST00000488216 OTOP1Q7RTM1 612 aa20.34■□□□□ 0.85
RBM3-207ENST00000488216 PODNQ7Z5L7 613 aa20.34■□□□□ 0.85
RBM3-207ENST00000488216 ZBTB38Q8NAP3 1195 aaPredicted RBP20.34■□□□□ 0.85
RBM3-207ENST00000488216 FBXW7Q969H0 707 aa20.34■□□□□ 0.85
RBM3-207ENST00000488216 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
RBM3-207ENST00000488216 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
RBM3-207ENST00000488216 ALDH1A1P00352 501 aa20.33■□□□□ 0.85
RBM3-207ENST00000488216 TMPOP42166 694 aaKnown RBP20.33■□□□□ 0.85
RBM3-207ENST00000488216 CCDC152Q4G0S7 254 aa20.33■□□□□ 0.85
RBM3-207ENST00000488216 OGFOD1Q8N543 542 aa20.33■□□□□ 0.85
RBM3-207ENST00000488216 CHL1O00533 1208 aa20.32■□□□□ 0.84
RBM3-207ENST00000488216 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
RBM3-207ENST00000488216 WTIPA6NIX2 430 aaPredicted RBP20.31■□□□□ 0.84
RBM3-207ENST00000488216 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
RBM3-207ENST00000488216 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
RBM3-207ENST00000488216 DACT2Q5SW24 774 aa20.31■□□□□ 0.84
RBM3-207ENST00000488216 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms