RNA–Protein interactions for RNA: ENST00000488093.1

MEST-217, mesoderm specific transcript, humanhuman

TSL 2

Gene MEST, Length 747 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-217ENST00000488093 CCDC171Q6TFL3 1326 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 GNPATO15228 680 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 RFC4P35249 363 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 ANKRD1Q15327 319 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 PUM3Q15397 648 aaKnown RBP9.42□□□□□ -0.9
MEST-217ENST00000488093 MCMDC2Q4G0Z9 681 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 LRRC24Q50LG9 513 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 TPTE2Q6XPS3 522 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 LPIN2Q92539 896 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 ZNF512BQ96KM6 892 aaPredicted RBP9.42□□□□□ -0.9
MEST-217ENST00000488093 KIF2CQ99661 725 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 TM6SF1Q9BZW5 370 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 GREM2Q9H772 168 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 SNRKQ9NRH2 765 aa9.42□□□□□ -0.9
MEST-217ENST00000488093 U3KPZ7 1027 aaPredicted RBP9.42□□□□□ -0.9
MEST-217ENST00000488093 UBN2Q6ZU65 1347 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 PDE8BO95263 885 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 SSFA2P28290 1259 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 NMIQ13287 307 aaPredicted RBP9.41□□□□□ -0.9
MEST-217ENST00000488093 NFKBIBQ15653 356 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 SUSD4Q5VX71 490 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 KRT27Q7Z3Y8 459 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 LINC00116Q8NCU8 138 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 XAGE2Q96GT9 111 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 ZNF594Q96JF6 807 aaPredicted RBP9.41□□□□□ -0.9
MEST-217ENST00000488093 NLRP3Q96P20 1036 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 LSG1Q9H089 658 aaKnown RBP9.41□□□□□ -0.9
MEST-217ENST00000488093 FOXD4L1Q9NU39 408 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 GNL3LQ9NVN8 582 aaKnown RBP9.41□□□□□ -0.9
MEST-217ENST00000488093 TLR7Q9NYK1 1049 aaKnown RBP9.41□□□□□ -0.9
MEST-217ENST00000488093 RIPOR2Q9Y4F9 1068 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 CYP46A1Q9Y6A2 500 aa9.41□□□□□ -0.9
MEST-217ENST00000488093 TUBGCP6Q96RT7 1819 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 SPEF2Q9C093 1822 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 GOLIM4O00461 696 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 NTSR2O95665 410 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
MEST-217ENST00000488093 TIMM10P62072 90 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 FKBP4Q02790 459 aaKnown RBP eCLIP9.4□□□□□ -0.9
MEST-217ENST00000488093 NBPF5PQ86XG9 351 aaPredicted RBP9.4□□□□□ -0.9
MEST-217ENST00000488093 ANKRD18AQ8IVF6 992 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 INTS4Q96HW7 963 aaKnown RBP9.4□□□□□ -0.9
MEST-217ENST00000488093 ZSCAN31Q96LW9 406 aaPredicted RBP9.4□□□□□ -0.9
MEST-217ENST00000488093 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
MEST-217ENST00000488093 CTNNA3Q9UI47 895 aa9.4□□□□□ -0.9
MEST-217ENST00000488093 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.9
MEST-217ENST00000488093 NUP98P52948 1817 aa9.4□□□□□ -0.91
MEST-217ENST00000488093 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
MEST-217ENST00000488093 RNF113AO15541 343 aaKnown RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 RBM6P78332 1123 aaKnown RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 SF3B3Q15393 1217 aaKnown RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 SLC10A5Q5PT55 438 aa9.39□□□□□ -0.91
MEST-217ENST00000488093 SPRYD3Q8NCJ5 442 aa9.39□□□□□ -0.91
MEST-217ENST00000488093 MAP4K1Q92918 833 aa9.39□□□□□ -0.91
MEST-217ENST00000488093 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
MEST-217ENST00000488093 SH2B1Q9NRF2 756 aaPredicted RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
MEST-217ENST00000488093 VPS53Q5VIR6 699 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 CREB3L3Q68CJ9 461 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
MEST-217ENST00000488093 BLOC1S2Q6QNY1 142 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 DDX46Q7L014 1031 aaKnown RBP9.38□□□□□ -0.91
MEST-217ENST00000488093 DSCC1Q9BVC3 393 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 PUS3Q9BZE2 481 aaKnown RBP9.38□□□□□ -0.91
MEST-217ENST00000488093 ANKRD2Q9GZV1 360 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 LIMCH1Q9UPQ0 1083 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 SNX14Q9Y5W7 946 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 MYH3P11055 1940 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 BTAF1O14981 1849 aa9.38□□□□□ -0.91
MEST-217ENST00000488093 MED23Q9ULK4 1368 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 IGSF3O75054 1194 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 CASTP20810 708 aaKnown RBP9.37□□□□□ -0.91
MEST-217ENST00000488093 MAP3K12Q12852 859 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 WASHC4Q2M389 1173 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 SKOR2Q2VWA4 1001 aaPredicted RBP9.37□□□□□ -0.91
MEST-217ENST00000488093 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 CAVIN4Q5BKX8 364 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 USPL1Q5W0Q7 1092 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 TMED8Q6PL24 325 aaPredicted RBP9.37□□□□□ -0.91
MEST-217ENST00000488093 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 FLAD1Q8NFF5 587 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 KCNB2Q92953 911 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 FAM227BQ96M60 508 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 JAKMIP1Q96N16 626 aaKnown RBP9.37□□□□□ -0.91
MEST-217ENST00000488093 PDRG1Q9NUG6 133 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
MEST-217ENST00000488093 A0A0D9SFI3 127 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 TAF5LO75529 589 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 ST5P78524 1137 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 FGD1P98174 961 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 RUFY3Q7L099 469 aa9.36□□□□□ -0.91
MEST-217ENST00000488093 APPBP2Q92624 585 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms