RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 ARHGEF10LQ9HCE6 1279 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 NRKQ7Z2Y5 1582 aa9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
TNFSF4-203ENST00000488053 SPATA31A1Q5TZJ5 1347 aa9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 EVA1CP58658 441 aa9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 NLRP3Q96P20 1036 aa9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 POLR3AO14802 1390 aaPredicted RBP9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
TNFSF4-203ENST00000488053 PPIP5K1Q6PFW1 1433 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 MEN1O00255 615 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 LCE2BO14633 110 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 TRIM37O94972 964 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 SCNN1DP51172 638 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 GDF10P55107 478 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 EZH2Q15910 746 aaKnown RBP9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 CCDC102BQ68D86 513 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 SIX5Q8N196 739 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 TPCN2Q8NHX9 752 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 KIFC2Q96AC6 838 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 ZNF594Q96JF6 807 aaPredicted RBP9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 ZFP42Q96MM3 310 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 INSM2Q96T92 566 aaPredicted RBP9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 ETNK1Q9HBU6 452 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 LRP5O75197 1615 aa9.09□□□□□ -0.95
TNFSF4-203ENST00000488053 CENPJQ9HC77 1338 aaPredicted RBP9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 SSH2Q76I76 1423 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 CAMTA1Q9Y6Y1 1673 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L15C9J2P7 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L10C9JJH3 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L13C9JLJ4 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L12C9JPN9 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L11C9JVI0 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L21D6R901 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L18D6R9N7 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L22D6RA61 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L17D6RBQ6 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L19D6RCP7 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L20D6RJB6 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 INHAP05111 366 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 USP17L24Q0WX57 530 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 PTK7Q13308 1070 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 R3HDM1Q15032 1099 aaKnown RBP9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 CRTC2Q53ET0 693 aaPredicted RBP9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 ESYT1Q9BSJ8 1104 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 KIAA1024Q9UPX6 916 aa9.08□□□□□ -0.96
TNFSF4-203ENST00000488053 ATG7O95352 703 aa9.07□□□□□ -0.96
TNFSF4-203ENST00000488053 IL2RAP01589 272 aa9.07□□□□□ -0.96
TNFSF4-203ENST00000488053 GPC1P35052 558 aa9.07□□□□□ -0.96
TNFSF4-203ENST00000488053 CDCA8Q53HL2 280 aa9.07□□□□□ -0.96
TNFSF4-203ENST00000488053 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
TNFSF4-203ENST00000488053 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
TNFSF4-203ENST00000488053 TTLL8A6PVC2 850 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 BACH1O14867 736 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 APBA3O96018 575 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 FAM196AQ6ZSG2 479 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 NLRP13Q86W25 1043 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 ANKMY2Q8IV38 441 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 TRIM47Q96LD4 638 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 CABP1Q9NZU7 370 aa9.06□□□□□ -0.96
TNFSF4-203ENST00000488053 USP19O94966 1318 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 STAU1O95793 577 aaKnown RBP9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 GCP02774 474 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 CTSOP43234 321 aaPredicted RBP9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 RNF144AP50876 292 aaPredicted RBP9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 SEC13P55735 322 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 ELOAQ14241 798 aaKnown RBP9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 TCP11L2Q8N4U5 519 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 L3MBTL2Q969R5 705 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 CAMKK2Q96RR4 588 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 SIN3AQ96ST3 1273 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 DISP2A7MBM2 1401 aa9.05□□□□□ -0.96
TNFSF4-203ENST00000488053 COL5A2P05997 1499 aaPredicted RBP9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 CPDO75976 1380 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 M0R2N6 131 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 NEUROD1Q13562 356 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 SLC4A9Q96Q91 983 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 GMPR2Q9P2T1 348 aaKnown RBP9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 NOVA2Q9UNW9 492 aaKnown RBP9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 HRH3Q9Y5N1 445 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 TRPM1Q7Z4N2 1603 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 PIK3C2AO00443 1686 aa9.04□□□□□ -0.96
TNFSF4-203ENST00000488053 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 MAN1A2O60476 641 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 DKK1O94907 266 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 CENPCQ03188 943 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 DPYDQ12882 1025 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms