RNA–Protein interactions for RNA: ENST00000488033.5

HCLS1-209, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-209ENST00000488033 COPS6Q7L5N1 327 aa17.75■□□□□ 0.43
HCLS1-209ENST00000488033 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
HCLS1-209ENST00000488033 DDX60Q8IY21 1712 aaKnown RBP17.75■□□□□ 0.43
HCLS1-209ENST00000488033 GPR25O00155 361 aa17.74■□□□□ 0.43
HCLS1-209ENST00000488033 VIL1P09327 827 aaKnown RBP17.74■□□□□ 0.43
HCLS1-209ENST00000488033 GPSM2P81274 684 aa17.74■□□□□ 0.43
HCLS1-209ENST00000488033 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
HCLS1-209ENST00000488033 SCARF1Q14162 830 aa17.74■□□□□ 0.43
HCLS1-209ENST00000488033 PAPPA2Q9BXP8 1791 aa17.74■□□□□ 0.43
HCLS1-209ENST00000488033 G3V3G9 751 aa17.73■□□□□ 0.43
HCLS1-209ENST00000488033 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
HCLS1-209ENST00000488033 MOB2Q70IA6 237 aa17.73■□□□□ 0.43
HCLS1-209ENST00000488033 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
HCLS1-209ENST00000488033 TSPYL4Q9UJ04 414 aa17.73■□□□□ 0.43
HCLS1-209ENST00000488033 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
HCLS1-209ENST00000488033 UBE2Q2LH0YL09 131 aa17.72■□□□□ 0.43
HCLS1-209ENST00000488033 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
HCLS1-209ENST00000488033 ZC3H12CQ9C0D7 883 aaKnown RBP17.72■□□□□ 0.43
HCLS1-209ENST00000488033 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
HCLS1-209ENST00000488033 TBC1D16Q8TBP0 767 aa17.71■□□□□ 0.43
HCLS1-209ENST00000488033 FKTNO75072 461 aa17.7■□□□□ 0.42
HCLS1-209ENST00000488033 TM4SF4P48230 202 aa17.7■□□□□ 0.42
HCLS1-209ENST00000488033 ZNF280AP59817 542 aaPredicted RBP17.7■□□□□ 0.42
HCLS1-209ENST00000488033 MKRN3Q13064 507 aaKnown RBP17.7■□□□□ 0.42
HCLS1-209ENST00000488033 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
HCLS1-209ENST00000488033 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
HCLS1-209ENST00000488033 NOM1Q5C9Z4 860 aaKnown RBP17.7■□□□□ 0.42
HCLS1-209ENST00000488033 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
HCLS1-209ENST00000488033 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
HCLS1-209ENST00000488033 PRAMEF18Q5VWM3 479 aa17.68■□□□□ 0.42
HCLS1-209ENST00000488033 RSBN1LQ6PCB5 846 aaPredicted RBP17.68■□□□□ 0.42
HCLS1-209ENST00000488033 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
HCLS1-209ENST00000488033 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
HCLS1-209ENST00000488033 PITPNM2Q9BZ72 1349 aa17.68■□□□□ 0.42
HCLS1-209ENST00000488033 CENPFP49454 3210 aa17.68■□□□□ 0.42
HCLS1-209ENST00000488033 UFL1O94874 794 aa17.67■□□□□ 0.42
HCLS1-209ENST00000488033 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
HCLS1-209ENST00000488033 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
HCLS1-209ENST00000488033 COL4A1P02462 1669 aa17.67■□□□□ 0.42
HCLS1-209ENST00000488033 HTTP42858 3142 aa17.67■□□□□ 0.42
HCLS1-209ENST00000488033 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
HCLS1-209ENST00000488033 SREBF2Q12772 1141 aa17.66■□□□□ 0.42
HCLS1-209ENST00000488033 CCER1Q8TC90 406 aaPredicted RBP17.66■□□□□ 0.42
HCLS1-209ENST00000488033 R3HDMLQ9H3Y0 253 aa17.66■□□□□ 0.42
HCLS1-209ENST00000488033 ANKIB1Q9P2G1 1089 aa17.66■□□□□ 0.42
HCLS1-209ENST00000488033 MAPK8IP3Q9UPT6 1336 aa17.66■□□□□ 0.42
HCLS1-209ENST00000488033 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
HCLS1-209ENST00000488033 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
HCLS1-209ENST00000488033 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
HCLS1-209ENST00000488033 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
HCLS1-209ENST00000488033 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
HCLS1-209ENST00000488033 NF2P35240 595 aa17.64■□□□□ 0.41
HCLS1-209ENST00000488033 INTS3Q68E01 1043 aaKnown RBP17.64■□□□□ 0.41
HCLS1-209ENST00000488033 TRIM17Q9Y577 477 aa17.64■□□□□ 0.41
HCLS1-209ENST00000488033 ZNF609O15014 1411 aa17.64■□□□□ 0.41
HCLS1-209ENST00000488033 PSME4Q14997 1843 aa17.63■□□□□ 0.41
HCLS1-209ENST00000488033 IRS4O14654 1257 aaPredicted RBP17.63■□□□□ 0.41
HCLS1-209ENST00000488033 FXR1P51114 621 aaKnown RBP eCLIP17.63■□□□□ 0.41
HCLS1-209ENST00000488033 GMLQ99445 158 aa17.63■□□□□ 0.41
HCLS1-209ENST00000488033 ISCA1Q9BUE6 129 aa17.63■□□□□ 0.41
HCLS1-209ENST00000488033 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
HCLS1-209ENST00000488033 KIAA0100Q14667 2235 aaKnown RBP17.63■□□□□ 0.41
HCLS1-209ENST00000488033 NBPF9Q3BBW0 867 aa17.62■□□□□ 0.41
HCLS1-209ENST00000488033 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
HCLS1-209ENST00000488033 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
HCLS1-209ENST00000488033 USP17L3A6NCW0 530 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 USP17L4A6NCW7 530 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
HCLS1-209ENST00000488033 PRKG1Q13976 671 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 USP17L1Q7RTZ2 530 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 SEC31BQ9NQW1 1179 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
HCLS1-209ENST00000488033 BRCA2P51587 3418 aa17.6■□□□□ 0.41
HCLS1-209ENST00000488033 ALDH1A1P00352 501 aa17.6■□□□□ 0.41
HCLS1-209ENST00000488033 ARMC9Q7Z3E5 817 aa17.6■□□□□ 0.41
HCLS1-209ENST00000488033 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
HCLS1-209ENST00000488033 RIPK4P57078 832 aa17.59■□□□□ 0.41
HCLS1-209ENST00000488033 OTOP1Q7RTM1 612 aa17.59■□□□□ 0.41
HCLS1-209ENST00000488033 SPRYD7Q5W111 196 aa17.58■□□□□ 0.4
HCLS1-209ENST00000488033 PODNQ7Z5L7 613 aa17.58■□□□□ 0.4
HCLS1-209ENST00000488033 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.58■□□□□ 0.4
HCLS1-209ENST00000488033 WNT10BO00744 389 aa17.57■□□□□ 0.4
HCLS1-209ENST00000488033 EN2P19622 333 aaPredicted RBP17.57■□□□□ 0.4
HCLS1-209ENST00000488033 KRT24Q2M2I5 525 aa17.57■□□□□ 0.4
HCLS1-209ENST00000488033 OGFOD1Q8N543 542 aa17.57■□□□□ 0.4
HCLS1-209ENST00000488033 RBBP6Q7Z6E9 1792 aaKnown RBP17.57■□□□□ 0.4
HCLS1-209ENST00000488033 XDHP47989 1333 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 HDGFL1Q5TGJ6 251 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 IFNL1Q8IU54 200 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 ANGEL1Q9UNK9 670 aaKnown RBP17.56■□□□□ 0.4
HCLS1-209ENST00000488033 PTPN22Q9Y2R2 807 aa17.56■□□□□ 0.4
HCLS1-209ENST00000488033 MANSC4A6NHS7 340 aaPredicted RBP17.55■□□□□ 0.4
HCLS1-209ENST00000488033 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
HCLS1-209ENST00000488033 INHBEP58166 350 aa17.55■□□□□ 0.4
HCLS1-209ENST00000488033 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
HCLS1-209ENST00000488033 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms