RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-212ENST00000487890 KIAA0586Q9BVV6 1533 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 IQGAP2Q13576 1575 aa4.9□□□□□ -1.63
GPNMB-212ENST00000487890 ANKRD62A6NC57 917 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 SPINT1O43278 529 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 STK10O94804 968 aaKnown RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 SMPD1P17405 629 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 GRM2Q14416 872 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 NBPF10Q6P3W6 841 aaKnown RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 PRICKLE2Q7Z3G6 844 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 HPS1Q92902 700 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 RNF166Q96A37 237 aaPredicted RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 TSEN34Q9BSV6 310 aaKnown RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 HIRIP3Q9BW71 556 aaPredicted RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 ZSWIM4Q9H7M6 989 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 NEUROD4Q9HD90 331 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 POLMQ9NP87 494 aaPredicted RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 KBTBD4Q9NVX7 518 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 GPC6Q9Y625 555 aaPredicted RBP4.89□□□□□ -1.63
GPNMB-212ENST00000487890 CTTNBP2Q8WZ74 1663 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 CARMIL2Q6F5E8 1435 aa4.89□□□□□ -1.63
GPNMB-212ENST00000487890 TTC24A2A3L6 582 aaPredicted RBP4.88□□□□□ -1.63
GPNMB-212ENST00000487890 GDF9O60383 454 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 MSX1P28360 303 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 ARSJQ5FYB0 599 aaPredicted RBP4.88□□□□□ -1.63
GPNMB-212ENST00000487890 GLIS3Q8NEA6 775 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 GPRASP2Q96D09 838 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 SRCIN1Q9C0H9 1055 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 SUV39H2Q9H5I1 410 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 ADAMTS1Q9UHI8 967 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
GPNMB-212ENST00000487890 PTPRGP23470 1445 aa4.88□□□□□ -1.63
GPNMB-212ENST00000487890 A0A1W2PNR3 127 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 A0A1W2PP55 124 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 POTECB2RU33 542 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 F6X3S4 739 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 XYLBO75191 536 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 CYP2E1P05181 493 aaPredicted RBP4.87□□□□□ -1.63
GPNMB-212ENST00000487890 RHOQP17081 205 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 MAP3K10Q02779 954 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 TYRO3Q06418 890 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 SOGA3Q5TF21 947 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 CYP4X1Q8N118 509 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 C3orf58Q8NDZ4 430 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 CEP63Q96MT8 703 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 TRIM56Q9BRZ2 755 aaKnown RBP4.87□□□□□ -1.63
GPNMB-212ENST00000487890 RSRP1Q9BUV0 290 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 OSBPL2Q9H1P3 480 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 LATS2Q9NRM7 1088 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 TOR4AQ9NXH8 423 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 TBX22Q9Y458 520 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 SBNO2Q9Y2G9 1366 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 RAPGEF2Q9Y4G8 1499 aa4.87□□□□□ -1.63
GPNMB-212ENST00000487890 MINDY4BA8MYZ0 360 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 TNFRSF10AO00220 468 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 EGFRP00533 1210 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 BMS1Q14692 1282 aaKnown RBP4.86□□□□□ -1.63
GPNMB-212ENST00000487890 KIAA0319Q5VV43 1072 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 SDE2Q6IQ49 451 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 ZNF746Q6NUN9 644 aaPredicted RBP4.86□□□□□ -1.63
GPNMB-212ENST00000487890 LINC00528Q8N1L1 170 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 NLGN1Q8N2Q7 840 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 RNF217Q8TC41 542 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 RASGRP4Q8TDF6 673 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 SPON2Q9BUD6 331 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 ZCCHC2Q9C0B9 1178 aaKnown RBP4.86□□□□□ -1.63
GPNMB-212ENST00000487890 TIMMDC1Q9NPL8 285 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 ABI2Q9NYB9 513 aaPredicted RBP4.86□□□□□ -1.63
GPNMB-212ENST00000487890 TTF2Q9UNY4 1162 aaKnown RBP4.86□□□□□ -1.63
GPNMB-212ENST00000487890 TNIKQ9UKE5 1360 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 DIP2BQ9P265 1576 aa4.86□□□□□ -1.63
GPNMB-212ENST00000487890 NCLP19338 710 aaKnown RBP4.85□□□□□ -1.63
GPNMB-212ENST00000487890 CES1P23141 567 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 GSTT1P30711 240 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 VEGFBP49765 207 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 CTC1Q2NKJ3 1217 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 WDR44Q5JSH3 913 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 TTC39BQ5VTQ0 682 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-212ENST00000487890 PEAR1Q5VY43 1037 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-212ENST00000487890 EGFLAMQ63HQ2 1017 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 LYSMD3Q7Z3D4 306 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 NLRP13Q86W25 1043 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 PMEPA1Q969W9 287 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 EAF1Q96JC9 268 aaPredicted RBP4.85□□□□□ -1.63
GPNMB-212ENST00000487890 NOC4LQ9BVI4 516 aaKnown RBP4.85□□□□□ -1.63
GPNMB-212ENST00000487890 ABCC10Q5T3U5 1492 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 MAPKBP1O60336 1514 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 KIAA0556O60303 1618 aa4.85□□□□□ -1.63
GPNMB-212ENST00000487890 A0A1B0GTH6 734 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 CAPN5O15484 640 aaPredicted RBP4.84□□□□□ -1.63
GPNMB-212ENST00000487890 SASH3O75995 380 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 EPB42P16452 691 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 FCGRTP55899 365 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 CCDC85BQ15834 202 aaPredicted RBP4.84□□□□□ -1.63
GPNMB-212ENST00000487890 C6orf118Q5T5N4 469 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 JAZF1Q86VZ6 243 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 RELL1Q8IUW5 271 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 KIAA0825Q8IV33 1275 aa4.84□□□□□ -1.63
GPNMB-212ENST00000487890 ANKRD13AQ8IZ07 590 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms