RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
PHF1-209ENST00000487667 IGHMBP2P38935 993 aaKnown RBP24.56■■□□□ 1.52
PHF1-209ENST00000487667 SLC10A5Q5PT55 438 aa24.56■■□□□ 1.52
PHF1-209ENST00000487667 TRAPPC3LQ5T215 181 aa24.56■■□□□ 1.52
PHF1-209ENST00000487667 XAGE2Q96GT9 111 aa24.56■■□□□ 1.52
PHF1-209ENST00000487667 ZNF512BQ96KM6 892 aaPredicted RBP24.56■■□□□ 1.52
PHF1-209ENST00000487667 DNAJC2Q99543 621 aaKnown RBP24.56■■□□□ 1.52
PHF1-209ENST00000487667 PAG1Q9NWQ8 432 aa24.56■■□□□ 1.52
PHF1-209ENST00000487667 PDE8BO95263 885 aa24.55■■□□□ 1.52
PHF1-209ENST00000487667 TTC39AQ5SRH9 613 aa24.55■■□□□ 1.52
PHF1-209ENST00000487667 CDC5LQ99459 802 aaKnown RBP24.55■■□□□ 1.52
PHF1-209ENST00000487667 FAM177BA6PVY3 158 aa24.55■■□□□ 1.52
PHF1-209ENST00000487667 NMIQ13287 307 aaPredicted RBP24.55■■□□□ 1.52
PHF1-209ENST00000487667 USPL1Q5W0Q7 1092 aa24.55■■□□□ 1.52
PHF1-209ENST00000487667 ANTXR1Q9H6X2 564 aa24.55■■□□□ 1.52
PHF1-209ENST00000487667 EP400Q96L91 3159 aa24.54■■□□□ 1.52
PHF1-209ENST00000487667 SF3B3Q15393 1217 aaKnown RBP24.54■■□□□ 1.52
PHF1-209ENST00000487667 APBA3O96018 575 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 HSP90AA1P07900 732 aaKnown RBP24.53■■□□□ 1.52
PHF1-209ENST00000487667 GTF2E1P29083 439 aaPredicted RBP24.53■■□□□ 1.52
PHF1-209ENST00000487667 RFC4P35249 363 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 PUM3Q15397 648 aaKnown RBP24.53■■□□□ 1.52
PHF1-209ENST00000487667 VGLL2Q8N8G2 317 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 IL25Q9H293 177 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 CCDC171Q6TFL3 1326 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 ARHGEF1Q92888 912 aaKnown RBP24.53■■□□□ 1.52
PHF1-209ENST00000487667 BCL2L12Q9HB09 334 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 LRRC4BQ9NT99 713 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 CHMP5Q9NZZ3 219 aa24.53■■□□□ 1.52
PHF1-209ENST00000487667 CIZ1Q9ULV3 898 aaPredicted RBP24.53■■□□□ 1.52
PHF1-209ENST00000487667 TPTE2Q6XPS3 522 aa24.52■■□□□ 1.52
PHF1-209ENST00000487667 LPIN2Q92539 896 aa24.52■■□□□ 1.52
PHF1-209ENST00000487667 SLKQ9H2G2 1235 aaPredicted RBP24.52■■□□□ 1.52
PHF1-209ENST00000487667 MED23Q9ULK4 1368 aa24.52■■□□□ 1.52
PHF1-209ENST00000487667 COL24A1Q17RW2 1714 aa24.52■■□□□ 1.52
PHF1-209ENST00000487667 TBC1D9BQ66K14 1250 aa24.51■■□□□ 1.51
PHF1-209ENST00000487667 UQCRFS1P1P0C7P4 283 aa24.51■■□□□ 1.51
PHF1-209ENST00000487667 RNF20Q5VTR2 975 aa24.51■■□□□ 1.51
PHF1-209ENST00000487667 HELLSQ9NRZ9 838 aa24.51■■□□□ 1.51
PHF1-209ENST00000487667 ZKSCAN1P17029 563 aaPredicted RBP24.5■■□□□ 1.51
PHF1-209ENST00000487667 MAP4K1Q92918 833 aa24.5■■□□□ 1.51
PHF1-209ENST00000487667 KCNB2Q92953 911 aa24.5■■□□□ 1.51
PHF1-209ENST00000487667 FAM227BQ96M60 508 aa24.5■■□□□ 1.51
PHF1-209ENST00000487667 ZFYP08048 801 aaPredicted RBP24.49■■□□□ 1.51
PHF1-209ENST00000487667 SLC5A1P13866 664 aa24.49■■□□□ 1.51
PHF1-209ENST00000487667 NEK4P51957 841 aa24.49■■□□□ 1.51
PHF1-209ENST00000487667 ERFEQ4G0M1 354 aa24.49■■□□□ 1.51
PHF1-209ENST00000487667 NBPF5PQ86XG9 351 aaPredicted RBP24.49■■□□□ 1.51
PHF1-209ENST00000487667 GOLIM4O00461 696 aa24.49■■□□□ 1.51
PHF1-209ENST00000487667 MCMDC2Q4G0Z9 681 aa24.49■■□□□ 1.51
PHF1-209ENST00000487667 A0A0D9SFI3 127 aa24.48■■□□□ 1.51
PHF1-209ENST00000487667 TTF1Q15361 905 aaPredicted RBP24.48■■□□□ 1.51
PHF1-209ENST00000487667 TXNRD1Q16881 649 aa24.48■■□□□ 1.51
PHF1-209ENST00000487667 DDX46Q7L014 1031 aaKnown RBP24.48■■□□□ 1.51
PHF1-209ENST00000487667 PALD1Q9ULE6 856 aa24.48■■□□□ 1.51
PHF1-209ENST00000487667 PLSCR1O15162 318 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 SSFA2P28290 1259 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 KCNJ4P48050 445 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 SMIM5Q71RC9 77 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 PROM2Q8N271 834 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 NLRP3Q96P20 1036 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 TM6SF1Q9BZW5 370 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 HMG20BQ9P0W2 317 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 CD2BP2O95400 341 aaKnown RBP24.47■■□□□ 1.51
PHF1-209ENST00000487667 FGFR2P21802 821 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 BICDL1Q6ZP65 573 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 ANKRD18AQ8IVF6 992 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 EDC3Q96F86 508 aaKnown RBP24.47■■□□□ 1.51
PHF1-209ENST00000487667 SRP68Q9UHB9 627 aaKnown RBP24.47■■□□□ 1.51
PHF1-209ENST00000487667 SNX14Q9Y5W7 946 aa24.47■■□□□ 1.51
PHF1-209ENST00000487667 CARMIL3Q8ND23 1372 aa24.46■■□□□ 1.51
PHF1-209ENST00000487667 ADORA1P30542 326 aa24.46■■□□□ 1.51
PHF1-209ENST00000487667 NECTIN1Q15223 517 aa24.46■■□□□ 1.51
PHF1-209ENST00000487667 ARAP2Q8WZ64 1704 aa24.46■■□□□ 1.51
PHF1-209ENST00000487667 ZSCAN25Q6NSZ9 544 aa24.45■■□□□ 1.51
PHF1-209ENST00000487667 SEC31BQ9NQW1 1179 aa24.45■■□□□ 1.51
PHF1-209ENST00000487667 C4AP0C0L4 1744 aa24.45■■□□□ 1.51
PHF1-209ENST00000487667 RNF113AO15541 343 aaKnown RBP24.45■■□□□ 1.5
PHF1-209ENST00000487667 PTH1RQ03431 593 aa24.45■■□□□ 1.5
PHF1-209ENST00000487667 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.45■■□□□ 1.57e-8■■■■□ 22.1
PHF1-209ENST00000487667 CWC22Q9HCG8 908 aaKnown RBP24.45■■□□□ 1.5
PHF1-209ENST00000487667 RBM8AQ9Y5S9 174 aaKnown RBP24.45■■□□□ 1.5
PHF1-209ENST00000487667 ARID4AP29374 1257 aaPredicted RBP24.44■■□□□ 1.5
PHF1-209ENST00000487667 FKBP4Q02790 459 aaKnown RBP eCLIP24.44■■□□□ 1.5
PHF1-209ENST00000487667 BSDC1Q9NW68 430 aaPredicted RBP24.44■■□□□ 1.5
PHF1-209ENST00000487667 PSMA5P28066 241 aa24.43■■□□□ 1.5
PHF1-209ENST00000487667 DDIT3P35638 169 aa24.43■■□□□ 1.5
PHF1-209ENST00000487667 ZMYM1Q5SVZ6 1142 aa24.43■■□□□ 1.5
PHF1-209ENST00000487667 U3KPZ7 1027 aaPredicted RBP24.43■■□□□ 1.5
PHF1-209ENST00000487667 TAF5LO75529 589 aa24.43■■□□□ 1.5
PHF1-209ENST00000487667 KRT32Q14532 448 aa24.42■■□□□ 1.5
PHF1-209ENST00000487667 PRPF40BQ6NWY9 871 aaKnown RBP24.42■■□□□ 1.5
PHF1-209ENST00000487667 SPRYD3Q8NCJ5 442 aa24.42■■□□□ 1.5
PHF1-209ENST00000487667 UBR3Q6ZT12 1888 aa24.42■■□□□ 1.5
PHF1-209ENST00000487667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.41■■□□□ 1.5
PHF1-209ENST00000487667 PHF14O94880 888 aa24.41■■□□□ 1.5
PHF1-209ENST00000487667 TSGA10IPQ3SY00 556 aa24.41■■□□□ 1.5
PHF1-209ENST00000487667 NFKBIBQ15653 356 aa24.41■■□□□ 1.5
PHF1-209ENST00000487667 CREB3L3Q68CJ9 461 aa24.41■■□□□ 1.5
PHF1-209ENST00000487667 CCDC102BQ68D86 513 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms