RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 NPR1P16066 1061 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 DNAJB2P25686 324 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 GTF2E1P29083 439 aaPredicted RBP7.41□□□□□ -1.22
MACF1-221ENST00000487656 PRKAR2BP31323 418 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 PBX2P40425 430 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 CCDC93Q567U6 631 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 LDHDQ86WU2 507 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 RTKN2Q8IZC4 609 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 KIAA1468Q9P260 1216 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 CEMIPQ8WUJ3 1361 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 ARFGEF2Q9Y6D5 1785 aa7.41□□□□□ -1.22
MACF1-221ENST00000487656 SMAPO00193 183 aa7.4□□□□□ -1.22
MACF1-221ENST00000487656 KCNQ3O43525 872 aa7.4□□□□□ -1.22
MACF1-221ENST00000487656 HTATSF1O43719 755 aaKnown RBP7.4□□□□□ -1.22
MACF1-221ENST00000487656 ZNF687Q8N1G0 1237 aa7.4□□□□□ -1.22
MACF1-221ENST00000487656 PHACTR3Q96KR7 559 aa7.4□□□□□ -1.22
MACF1-221ENST00000487656 RSPH6AQ9H0K4 717 aa7.4□□□□□ -1.22
MACF1-221ENST00000487656 GOPCQ9HD26 462 aa7.4□□□□□ -1.22
MACF1-221ENST00000487656 MKRN1Q9UHC7 482 aaKnown RBP7.4□□□□□ -1.22
MACF1-221ENST00000487656 COL11A2P13942 1736 aaPredicted RBP7.4□□□□□ -1.23
MACF1-221ENST00000487656 BCORQ6W2J9 1755 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 KLRG2A4D1S0 409 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 TMEM88BA6NKF7 163 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 NEFMP07197 916 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 U2AF1L5P0DN76 240 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 PIP4K2AP48426 406 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 U2AF1Q01081 240 aaKnown RBP eCLIP7.39□□□□□ -1.23
MACF1-221ENST00000487656 FKBP4Q02790 459 aaKnown RBP eCLIP7.39□□□□□ -1.23
MACF1-221ENST00000487656 TAF7Q15545 349 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 EAPPQ56P03 285 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 PNMA8AQ86V59 439 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 C7orf43Q8WVR3 580 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 JDP2Q8WYK2 163 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 SLC4A5Q9BY07 1137 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 TAF1DQ9H5J8 278 aaPredicted RBP7.39□□□□□ -1.23
MACF1-221ENST00000487656 HACL1Q9UJ83 578 aa7.39□□□□□ -1.23
MACF1-221ENST00000487656 NIP7Q9Y221 180 aaKnown RBP eCLIP7.39□□□□□ -1.23
MACF1-221ENST00000487656 COL3A1P02461 1466 aaPredicted RBP7.38□□□□□ -1.23
MACF1-221ENST00000487656 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 GRIPAP1Q4V328 841 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 CC2D2BQ6DHV5 1058 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 MCM10Q7L590 875 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 SULF1Q8IWU6 871 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 SYNE4Q8N205 404 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 PCMTD1Q96MG8 357 aaPredicted RBP7.38□□□□□ -1.23
MACF1-221ENST00000487656 NYXQ9GZU5 481 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 PRDM10Q9NQV6 1147 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 ZNF277Q9NRM2 450 aaPredicted RBP7.38□□□□□ -1.23
MACF1-221ENST00000487656 RABGEF1Q9UJ41 708 aa7.38□□□□□ -1.23
MACF1-221ENST00000487656 PCNTO95613 3336 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 CNTNAP1P78357 1384 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 PASKQ96RG2 1323 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 PRAMEF22A3QJZ6 481 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 ITGBL1O95965 494 aaPredicted RBP7.37□□□□□ -1.23
MACF1-221ENST00000487656 EPHX2P34913 555 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 IARSP41252 1262 aaKnown RBP7.37□□□□□ -1.23
MACF1-221ENST00000487656 CTCFP49711 727 aaPredicted RBP7.37□□□□□ -1.23
MACF1-221ENST00000487656 EIF6P56537 245 aaKnown RBP7.37□□□□□ -1.23
MACF1-221ENST00000487656 DEFB115Q30KQ5 88 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 POTEEQ6S8J3 1075 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 CNTROBQ8N137 903 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 GPC2Q8N158 579 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 PNISRQ8TF01 805 aaKnown RBP7.37□□□□□ -1.23
MACF1-221ENST00000487656 TMX4Q9H1E5 349 aaPredicted RBP7.37□□□□□ -1.23
MACF1-221ENST00000487656 TMEM134Q9H6X4 195 aa7.37□□□□□ -1.23
MACF1-221ENST00000487656 NUP98P52948 1817 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 DDX11L8A8MPP1 907 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 ERVV-1B6SEH8 477 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 FZD9O00144 591 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 FOXN1O15353 648 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 LMOD1P29536 600 aaPredicted RBP7.36□□□□□ -1.23
MACF1-221ENST00000487656 VEGFBP49765 207 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 DCTN1Q14203 1278 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 DIXDC1Q155Q3 683 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 SH3D19Q5HYK7 790 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 NBPF10Q6P3W6 841 aaKnown RBP7.36□□□□□ -1.23
MACF1-221ENST00000487656 NGEFQ8N5V2 710 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 NBPF15Q8N660 670 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 RPGRQ92834 1020 aaKnown RBP7.36□□□□□ -1.23
MACF1-221ENST00000487656 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 PSMD1Q99460 953 aa7.36□□□□□ -1.23
MACF1-221ENST00000487656 ZNF541Q9H0D2 1346 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 PPP2R1AP30153 589 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 MAP2K1Q02750 393 aaPredicted RBP7.35□□□□□ -1.23
MACF1-221ENST00000487656 SKIV2LQ15477 1246 aaKnown RBP7.35□□□□□ -1.23
MACF1-221ENST00000487656 HLFQ16534 295 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 MAP1SQ66K74 1059 aaPredicted RBP7.35□□□□□ -1.23
MACF1-221ENST00000487656 OLFM4Q6UX06 510 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 KIF6Q6ZMV9 814 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 RBM17Q96I25 401 aaKnown RBP7.35□□□□□ -1.23
MACF1-221ENST00000487656 PNNQ9H307 717 aaKnown RBP7.35□□□□□ -1.23
MACF1-221ENST00000487656 WBP1LQ9NX94 342 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 MIS18AQ9NYP9 233 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 VPS9D1Q9Y2B5 631 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 RRP7AQ9Y3A4 280 aaKnown RBP7.35□□□□□ -1.23
MACF1-221ENST00000487656 GJA3Q9Y6H8 435 aa7.35□□□□□ -1.23
MACF1-221ENST00000487656 RNF123Q5XPI4 1314 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms