RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 SBF1O95248 1867 aa16.56■□□□□ 0.24
COL4A6-207ENST00000487645 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
COL4A6-207ENST00000487645 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
COL4A6-207ENST00000487645 PODXL2Q9NZ53 605 aa16.56■□□□□ 0.24
COL4A6-207ENST00000487645 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
COL4A6-207ENST00000487645 EYA2O00167 538 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 HMMRO75330 724 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 CIAO1O76071 339 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 ARHGAP27Q6ZUM4 889 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 MPNDQ8N594 471 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
COL4A6-207ENST00000487645 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
COL4A6-207ENST00000487645 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
COL4A6-207ENST00000487645 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
COL4A6-207ENST00000487645 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
COL4A6-207ENST00000487645 DPP8Q6V1X1 898 aaPredicted RBP16.54■□□□□ 0.24
COL4A6-207ENST00000487645 PSMD1Q99460 953 aa16.54■□□□□ 0.24
COL4A6-207ENST00000487645 RTFDC1Q9BY42 306 aaPredicted RBP16.54■□□□□ 0.24
COL4A6-207ENST00000487645 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
COL4A6-207ENST00000487645 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
COL4A6-207ENST00000487645 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
COL4A6-207ENST00000487645 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 XDHP47989 1333 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
COL4A6-207ENST00000487645 GPSM2P81274 684 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 FKBP4Q02790 459 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL4A6-207ENST00000487645 CHRNDQ07001 517 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 SUPT20HQ8NEM7 779 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
COL4A6-207ENST00000487645 LEMD3Q9Y2U8 911 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 CHD4Q14839 1912 aa16.53■□□□□ 0.24
COL4A6-207ENST00000487645 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
COL4A6-207ENST00000487645 ATP2B4P23634 1241 aa16.52■□□□□ 0.24
COL4A6-207ENST00000487645 G3BP1Q13283 466 aaKnown RBP eCLIP16.52■□□□□ 0.24
COL4A6-207ENST00000487645 ATG9AQ7Z3C6 839 aa16.52■□□□□ 0.24
COL4A6-207ENST00000487645 NFKBIEO00221 500 aa16.51■□□□□ 0.23
COL4A6-207ENST00000487645 SURF6O75683 361 aaKnown RBP16.51■□□□□ 0.23
COL4A6-207ENST00000487645 HSP90AB4PQ58FF6 505 aa16.51■□□□□ 0.23
COL4A6-207ENST00000487645 SIL1Q9H173 461 aa16.51■□□□□ 0.23
COL4A6-207ENST00000487645 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
COL4A6-207ENST00000487645 GGA1Q9UJY5 639 aa16.51■□□□□ 0.23
COL4A6-207ENST00000487645 PDE8BO95263 885 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 NEFLP07196 543 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 METTL24Q5JXM2 366 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 SLC51AQ86UW1 340 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 HELBQ8NG08 1087 aaPredicted RBP16.5■□□□□ 0.23
COL4A6-207ENST00000487645 TBC1D16Q8TBP0 767 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
COL4A6-207ENST00000487645 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
COL4A6-207ENST00000487645 UBE4AQ14139 1066 aa16.49■□□□□ 0.23
COL4A6-207ENST00000487645 VGLL2Q8N8G2 317 aa16.49■□□□□ 0.23
COL4A6-207ENST00000487645 EYA3Q99504 573 aa16.49■□□□□ 0.23
COL4A6-207ENST00000487645 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
COL4A6-207ENST00000487645 TAF5LO75529 589 aa16.48■□□□□ 0.23
COL4A6-207ENST00000487645 UFL1O94874 794 aa16.48■□□□□ 0.23
COL4A6-207ENST00000487645 LMNB1P20700 586 aa16.48■□□□□ 0.23
COL4A6-207ENST00000487645 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
COL4A6-207ENST00000487645 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
COL4A6-207ENST00000487645 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
COL4A6-207ENST00000487645 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
COL4A6-207ENST00000487645 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
COL4A6-207ENST00000487645 SASH1O94885 1247 aa16.47■□□□□ 0.23
COL4A6-207ENST00000487645 IARSP41252 1262 aaKnown RBP16.47■□□□□ 0.23
COL4A6-207ENST00000487645 KCNJ4P48050 445 aa16.47■□□□□ 0.23
COL4A6-207ENST00000487645 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
COL4A6-207ENST00000487645 C15orf52Q6ZUT6 534 aaKnown RBP16.47■□□□□ 0.23
COL4A6-207ENST00000487645 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
COL4A6-207ENST00000487645 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
COL4A6-207ENST00000487645 AKAP2Q9Y2D5 859 aa16.47■□□□□ 0.23
COL4A6-207ENST00000487645 UTRNP46939 3433 aa16.46■□□□□ 0.23
COL4A6-207ENST00000487645 RASSF7Q02833 373 aa16.46■□□□□ 0.23
COL4A6-207ENST00000487645 KIAA2012Q0VF49 1180 aa16.46■□□□□ 0.23
COL4A6-207ENST00000487645 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
COL4A6-207ENST00000487645 PUM3Q15397 648 aaKnown RBP16.46■□□□□ 0.23
COL4A6-207ENST00000487645 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
COL4A6-207ENST00000487645 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.23
COL4A6-207ENST00000487645 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
COL4A6-207ENST00000487645 FGFR2P21802 821 aa16.45■□□□□ 0.22
COL4A6-207ENST00000487645 TFCP2Q12800 502 aa16.45■□□□□ 0.22
COL4A6-207ENST00000487645 ERICH6BQ5W0A0 696 aa16.45■□□□□ 0.22
COL4A6-207ENST00000487645 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
COL4A6-207ENST00000487645 MED23Q9ULK4 1368 aa16.44■□□□□ 0.22
COL4A6-207ENST00000487645 PPIP5K2O43314 1243 aa16.44■□□□□ 0.22
COL4A6-207ENST00000487645 PRELPP51888 382 aa16.44■□□□□ 0.22
COL4A6-207ENST00000487645 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
COL4A6-207ENST00000487645 LPIN2Q92539 896 aa16.44■□□□□ 0.22
COL4A6-207ENST00000487645 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
COL4A6-207ENST00000487645 SNAP23O00161 211 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 RIMBP2O15034 1052 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
COL4A6-207ENST00000487645 SLC5A1P13866 664 aa16.43■□□□□ 0.22
COL4A6-207ENST00000487645 ATP2B3Q16720 1220 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms