RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GMPSP49915 693 aaPredicted RBP14.55□□□□□ -0.08
SPEN-205ENST00000487496 DOK7Q18PE1 504 aa14.55□□□□□ -0.08
SPEN-205ENST00000487496 TRMT2AQ8IZ69 625 aaKnown RBP14.55□□□□□ -0.08
SPEN-205ENST00000487496 MRPL50Q8N5N7 158 aaKnown RBP14.55□□□□□ -0.08
SPEN-205ENST00000487496 KLRG1Q96E93 195 aa14.55□□□□□ -0.08
SPEN-205ENST00000487496 ZC3H12CQ9C0D7 883 aaKnown RBP14.55□□□□□ -0.08
SPEN-205ENST00000487496 BSDC1Q9NW68 430 aaPredicted RBP14.55□□□□□ -0.08
SPEN-205ENST00000487496 GGA1Q9UJY5 639 aa14.55□□□□□ -0.08
SPEN-205ENST00000487496 MINPP1Q9UNW1 487 aa14.55□□□□□ -0.08
SPEN-205ENST00000487496 ITGA6P23229 1130 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 FAM161AQ3B820 660 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 MAP1SQ66K74 1059 aaPredicted RBP14.54□□□□□ -0.08
SPEN-205ENST00000487496 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 USP50Q70EL3 339 aaPredicted RBP14.54□□□□□ -0.08
SPEN-205ENST00000487496 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 BCL2L13Q9BXK5 485 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 XDHP47989 1333 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 PASKQ96RG2 1323 aa14.54□□□□□ -0.08
SPEN-205ENST00000487496 ADAMTSL1Q8N6G6 1762 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 GRM8O00222 908 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 ECE2O60344 883 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 ALDH1L1O75891 902 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 IGHMBP2P38935 993 aaKnown RBP14.53□□□□□ -0.08
SPEN-205ENST00000487496 FOXO4P98177 505 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
SPEN-205ENST00000487496 CNTROBQ8N137 903 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 KCNQ5Q9NR82 932 aa14.53□□□□□ -0.08
SPEN-205ENST00000487496 ADARB2Q9NS39 739 aaKnown RBP14.53□□□□□ -0.08
SPEN-205ENST00000487496 WTIPA6NIX2 430 aaPredicted RBP14.52□□□□□ -0.09
SPEN-205ENST00000487496 PSMD14O00487 310 aa14.52□□□□□ -0.09
SPEN-205ENST00000487496 ATP2B4P23634 1241 aa14.52□□□□□ -0.09
SPEN-205ENST00000487496 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
SPEN-205ENST00000487496 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.09
SPEN-205ENST00000487496 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
SPEN-205ENST00000487496 MYH3P11055 1940 aa14.51□□□□□ -0.09
SPEN-205ENST00000487496 PTPRCP08575 1304 aa14.51□□□□□ -0.09
SPEN-205ENST00000487496 G3V3G9 751 aa14.51□□□□□ -0.09
SPEN-205ENST00000487496 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
SPEN-205ENST00000487496 MIER1Q8N108 512 aa14.51□□□□□ -0.09
SPEN-205ENST00000487496 CNOT7Q9UIV1 285 aaKnown RBP14.51□□□□□ -0.09
SPEN-205ENST00000487496 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 ANKRD18BA2A2Z9 1011 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 CCT4P50991 539 aaKnown RBP14.5□□□□□ -0.09
SPEN-205ENST00000487496 ALDH1L2Q3SY69 923 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 EPHA10Q5JZY3 1008 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 LMBR1LQ6UX01 489 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 JMYQ8N9B5 988 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 DPF2Q92785 391 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 MPHOSPH8Q99549 860 aa14.5□□□□□ -0.09
SPEN-205ENST00000487496 H7C1D1 291 aa14.49□□□□□ -0.09
SPEN-205ENST00000487496 HIRAP54198 1017 aaPredicted RBP14.49□□□□□ -0.09
SPEN-205ENST00000487496 IFIT5Q13325 482 aaKnown RBP14.49□□□□□ -0.09
SPEN-205ENST00000487496 MICALL2Q8IY33 904 aa14.49□□□□□ -0.09
SPEN-205ENST00000487496 ANKRD2Q9GZV1 360 aa14.49□□□□□ -0.09
SPEN-205ENST00000487496 LEMD3Q9Y2U8 911 aa14.49□□□□□ -0.09
SPEN-205ENST00000487496 CHMP3Q9Y3E7 222 aa14.49□□□□□ -0.09
SPEN-205ENST00000487496 TMEM88BA6NKF7 163 aa14.48□□□□□ -0.09
SPEN-205ENST00000487496 VIL1P09327 827 aaKnown RBP14.48□□□□□ -0.09
SPEN-205ENST00000487496 CT47B1P0C2W7 299 aaPredicted RBP14.48□□□□□ -0.09
SPEN-205ENST00000487496 NBPF7P0C2Y1 421 aaPredicted RBP14.48□□□□□ -0.09
SPEN-205ENST00000487496 RPS12P25398 132 aaKnown RBP14.48□□□□□ -0.09
SPEN-205ENST00000487496 PODNQ7Z5L7 613 aa14.48□□□□□ -0.09
SPEN-205ENST00000487496 TRPM4Q8TD43 1214 aa14.48□□□□□ -0.09
SPEN-205ENST00000487496 SMC4Q9NTJ3 1288 aa14.48□□□□□ -0.09
SPEN-205ENST00000487496 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 ZNF804BA4D1E1 1349 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 UTYO14607 1347 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 CHRNDQ07001 517 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 CCDC57Q2TAC2 916 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 ZC3H15Q8WU90 426 aaKnown RBP14.47□□□□□ -0.09
SPEN-205ENST00000487496 KAZALD1Q96I82 304 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
SPEN-205ENST00000487496 TRAF5O00463 557 aa14.46□□□□□ -0.09
SPEN-205ENST00000487496 FMR1Q06787 632 aaKnown RBP eCLIP14.46□□□□□ -0.09
SPEN-205ENST00000487496 SAMD7Q7Z3H4 446 aa14.46□□□□□ -0.09
SPEN-205ENST00000487496 TXNRD3Q86VQ6 643 aa14.46□□□□□ -0.09
SPEN-205ENST00000487496 SUCLG2Q96I99 432 aa14.46□□□□□ -0.09
SPEN-205ENST00000487496 MKRN1Q9UHC7 482 aaKnown RBP14.46□□□□□ -0.09
SPEN-205ENST00000487496 SPEF2Q9C093 1822 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 SCN9AQ15858 1988 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 USP17L3A6NCW0 530 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 USP17L4A6NCW7 530 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 KLRK1P26718 216 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 TBC1D10BQ4KMP7 808 aaPredicted RBP14.45□□□□□ -0.1
SPEN-205ENST00000487496 RSBN1LQ6PCB5 846 aaPredicted RBP14.45□□□□□ -0.1
SPEN-205ENST00000487496 USP17L1Q7RTZ2 530 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 ZNF594Q96JF6 807 aaPredicted RBP14.45□□□□□ -0.1
SPEN-205ENST00000487496 COA1Q9GZY4 146 aa14.45□□□□□ -0.1
SPEN-205ENST00000487496 SNAP23O00161 211 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 TAF5LO75529 589 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 EGFRP00533 1210 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 KCNJ4P48050 445 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
SPEN-205ENST00000487496 TAF7LQ5H9L4 462 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 RBM26Q5T8P6 1007 aaKnown RBP14.44□□□□□ -0.1
SPEN-205ENST00000487496 LDHAL6AQ6ZMR3 332 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 AGBL3Q8NEM8 1001 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 HELBQ8NG08 1087 aaPredicted RBP14.44□□□□□ -0.1
SPEN-205ENST00000487496 GLIS2Q9BZE0 524 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms