RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 NUDT7P0C024 238 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 HCLS1P14317 486 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-209ENST00000487244 HSP90AB3PQ58FF7 597 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 RTL5Q5HYW3 569 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-209ENST00000487244 C9orf131Q5VYM1 1079 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 PPP1R42Q7Z4L9 355 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 RIC3Q7Z5B4 369 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 CNKSR1Q969H4 720 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 MYH16Q9H6N6 1097 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 TRMT112Q9UI30 125 aaKnown RBP9.21□□□□□ -0.94
UBE4B-209ENST00000487244 PDZRN3Q9UPQ7 1066 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 MYH3P11055 1940 aa9.21□□□□□ -0.94
UBE4B-209ENST00000487244 C7orf43Q8WVR3 580 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 MYD88Q99836 296 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 STK31Q9BXU1 1019 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 RNF181Q9P0P0 153 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 SH3TC1Q8TE82 1336 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 SNED1Q8TER0 1413 aa9.2□□□□□ -0.94
UBE4B-209ENST00000487244 SPEF2Q9C093 1822 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 PI4KAP2A4QPH2 592 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 HOXA10P31260 410 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-209ENST00000487244 FLIIQ13045 1269 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 SLC10A5Q5PT55 438 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 PI4KAP1Q8N8J0 262 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 OXER1Q8TDS5 423 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 JARID2Q92833 1246 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-209ENST00000487244 RPGRQ92834 1020 aaKnown RBP9.19□□□□□ -0.94
UBE4B-209ENST00000487244 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 RNF123Q5XPI4 1314 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 LRRC37AA6NMS7 1700 aa9.19□□□□□ -0.94
UBE4B-209ENST00000487244 ABCC4O15439 1325 aa9.18□□□□□ -0.94
UBE4B-209ENST00000487244 IGKV5-2P06315 115 aa9.18□□□□□ -0.94
UBE4B-209ENST00000487244 COL4A5P29400 1685 aa9.18□□□□□ -0.94
UBE4B-209ENST00000487244 SLFN5Q08AF3 891 aa9.18□□□□□ -0.94
UBE4B-209ENST00000487244 CWF19L2Q2TBE0 894 aaKnown RBP9.18□□□□□ -0.94
UBE4B-209ENST00000487244 VARS2Q5ST30 1063 aaKnown RBP9.18□□□□□ -0.94
UBE4B-209ENST00000487244 KSR2Q6VAB6 950 aa9.18□□□□□ -0.94
UBE4B-209ENST00000487244 METTL22Q9BUU2 404 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-209ENST00000487244 LTBP3Q9NS15 1303 aa9.17□□□□□ -0.94
UBE4B-209ENST00000487244 DDX58O95786 925 aaKnown RBP9.17□□□□□ -0.94
UBE4B-209ENST00000487244 LMNB1P20700 586 aa9.17□□□□□ -0.94
UBE4B-209ENST00000487244 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
UBE4B-209ENST00000487244 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
UBE4B-209ENST00000487244 FKBP5Q13451 457 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-209ENST00000487244 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
UBE4B-209ENST00000487244 TAOK3Q9H2K8 898 aa9.17□□□□□ -0.94
UBE4B-209ENST00000487244 NEURL1BA8MQ27 555 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 E9PSI1 815 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 F6X3S4 739 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 IRS4O14654 1257 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-209ENST00000487244 PPEF1O14829 653 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-209ENST00000487244 ALDH1B1P30837 517 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 CCDC93Q567U6 631 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 ZBTB38Q8NAP3 1195 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-209ENST00000487244 CCDC191Q8NCU4 936 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 RBM17Q96I25 401 aaKnown RBP9.16□□□□□ -0.94
UBE4B-209ENST00000487244 CRAMP1Q96RY5 1269 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 CHMP4AQ9BY43 222 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 GPBP1L1Q9HC44 474 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-209ENST00000487244 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 CWC25Q9NXE8 425 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-209ENST00000487244 LTBP1Q14766 1721 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 DUOX1Q9NRD9 1551 aa9.16□□□□□ -0.94
UBE4B-209ENST00000487244 PCCAP05165 728 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-209ENST00000487244 SOGA3Q5TF21 947 aa9.15□□□□□ -0.94
UBE4B-209ENST00000487244 TRMT2AQ8IZ69 625 aaKnown RBP9.15□□□□□ -0.94
UBE4B-209ENST00000487244 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.94
UBE4B-209ENST00000487244 BCL2L13Q9BXK5 485 aa9.15□□□□□ -0.94
UBE4B-209ENST00000487244 ZNF277Q9NRM2 450 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-209ENST00000487244 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
UBE4B-209ENST00000487244 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
UBE4B-209ENST00000487244 FKBP4Q02790 459 aaKnown RBP eCLIP9.14□□□□□ -0.95
UBE4B-209ENST00000487244 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
UBE4B-209ENST00000487244 UBE3BQ7Z3V4 1068 aa9.14□□□□□ -0.95
UBE4B-209ENST00000487244 CELF1Q92879 486 aaKnown RBP9.14□□□□□ -0.95
UBE4B-209ENST00000487244 CCDC85AQ96PX6 553 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-209ENST00000487244 CDHR2Q9BYE9 1310 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 NEXNQ0ZGT2 675 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 GRAPQ13588 217 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 GCKRQ14397 625 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 SF3B3Q15393 1217 aaKnown RBP9.13□□□□□ -0.95
UBE4B-209ENST00000487244 DDX46Q7L014 1031 aaKnown RBP9.13□□□□□ -0.95
UBE4B-209ENST00000487244 RTKN2Q8IZC4 609 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
UBE4B-209ENST00000487244 GRAPLQ8TC17 118 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-209ENST00000487244 SSH1Q8WYL5 1049 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 SEC31BQ9NQW1 1179 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 EMILIN3Q9NT22 766 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 ATP6V0A2Q9Y487 856 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 WDR90Q96KV7 1748 aa9.13□□□□□ -0.95
UBE4B-209ENST00000487244 A0A1B0GUL6 1792 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 ZNF541Q9H0D2 1346 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
UBE4B-209ENST00000487244 H7C1W4 665 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms