RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
PRPF38A-203ENST00000487160 EDN3P14138 238 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 SOX18P35713 384 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 PLAURQ03405 335 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 GRM2Q14416 872 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 KIAA0319Q5VV43 1072 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 NCAPG2Q86XI2 1143 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 NANOS1Q8WY41 292 aaKnown RBP8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 CRELD1Q96HD1 420 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 EHD4Q9H223 541 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 FAM8A1Q9UBU6 413 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
PRPF38A-203ENST00000487160 C2CD2LO14523 706 aa8.01□□□□□ -1.13
PRPF38A-203ENST00000487160 FANCCQ00597 558 aa8.01□□□□□ -1.13
PRPF38A-203ENST00000487160 HYAL2Q12891 473 aa8.01□□□□□ -1.13
PRPF38A-203ENST00000487160 NEUROD1Q13562 356 aa8.01□□□□□ -1.13
PRPF38A-203ENST00000487160 NSUN5Q96P11 429 aaKnown RBP8.01□□□□□ -1.13
PRPF38A-203ENST00000487160 IGFLR1Q9H665 355 aa8.01□□□□□ -1.13
PRPF38A-203ENST00000487160 ZBTB42B2RXF5 422 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 KIF4AO95239 1232 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 USP17L7P0C7H9 530 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 ACPPP15309 386 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 ERCC5P28715 1186 aaPredicted RBP8□□□□□ -1.13
PRPF38A-203ENST00000487160 ZNF76P36508 570 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 METTL16Q86W50 562 aaKnown RBP8□□□□□ -1.13
PRPF38A-203ENST00000487160 GLIS3Q8NEA6 775 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 RNF34Q969K3 372 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 METTL5Q9NRN9 209 aaKnown RBP8□□□□□ -1.13
PRPF38A-203ENST00000487160 PPP4R2Q9NY27 417 aa8□□□□□ -1.13
PRPF38A-203ENST00000487160 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 J3QW42 95 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 TRPA1O75762 1119 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 HOXD8P13378 290 aaPredicted RBP7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 MLLT1Q03111 559 aaPredicted RBP7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 MEI1Q5TIA1 1274 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 SYT9Q86SS6 491 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 NT5DC4Q86YG4 428 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 CEP120Q8N960 986 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 CNTNAP3BQ96NU0 1288 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 OSMRQ99650 979 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 ZKSCAN3Q9BRR0 538 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 CNTNAP3Q9BZ76 1288 aa7.99□□□□□ -1.13
PRPF38A-203ENST00000487160 LOC102724428A0A0B4J2F2 783 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 BMP4P12644 408 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 NRLP54845 237 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 SIK1P57059 783 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 TAF1CQ15572 869 aaPredicted RBP7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 HFE2Q6ZVN8 426 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 TRPM4Q8TD43 1214 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 TRAK1Q9UPV9 953 aa7.98□□□□□ -1.13
PRPF38A-203ENST00000487160 FCGRTP55899 365 aa7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 PCBP4P57723 403 aaKnown RBP7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 GPLD1P80108 840 aa7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 TBC1D8BQ0IIM8 1120 aa7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 ZNF468Q5VIY5 522 aaPredicted RBP7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 SPACA7Q96KW9 195 aa7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 TCF12Q99081 682 aa7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 UBE2OQ9C0C9 1292 aaKnown RBP7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 DZANK1Q9NVP4 752 aa7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 DNAJB12Q9NXW2 375 aaKnown RBP7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
PRPF38A-203ENST00000487160 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 MX2P20592 715 aa7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 GSTT1P30711 240 aa7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 RAD51AP2Q09MP3 1159 aa7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 GPR161Q8N6U8 529 aaKnown RBP7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 C3orf58Q8NDZ4 430 aa7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 HHIPQ96QV1 700 aa7.96□□□□□ -1.14
PRPF38A-203ENST00000487160 NFKBIEO00221 500 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 IGSF3O75054 1194 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 SIN3BO75182 1162 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 GAS6Q14393 721 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 PRPF40BQ6NWY9 871 aaKnown RBP7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 CCNJLQ8IV13 435 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 ABCB6Q9NP58 842 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 KLF15Q9UIH9 416 aa7.95□□□□□ -1.14
PRPF38A-203ENST00000487160 GRIA4P48058 902 aa7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 ZC3H6P61129 1189 aaKnown RBP7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 DTHD1Q6ZMT9 781 aa7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 OXCT2Q9BYC2 517 aaPredicted RBP7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 TTF2Q9UNY4 1162 aaKnown RBP7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 AKAP2Q9Y2D5 859 aa7.94□□□□□ -1.14
PRPF38A-203ENST00000487160 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 GHRHP01286 108 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 ST13P50502 369 aaKnown RBP7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 ATP11AP98196 1134 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 PCSK7Q16549 785 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 NXPE3Q969Y0 559 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 C8orf37Q96NL8 207 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 GGT7Q9UJ14 662 aa7.93□□□□□ -1.14
PRPF38A-203ENST00000487160 H3BM21 787 aa7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 XRCC5P13010 732 aaKnown RBP7.92□□□□□ -1.14
PRPF38A-203ENST00000487160 CPB1P15086 417 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms