RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 DBNDD1Q9H9R9 158 aa28.3■■■□□ 2.12
CDHR3-212ENST00000487084 ANKRD18BA2A2Z9 1011 aa28.29■■■□□ 2.12
CDHR3-212ENST00000487084 LMOD1P29536 600 aaPredicted RBP28.29■■■□□ 2.12
CDHR3-212ENST00000487084 CXCL9Q07325 125 aa28.29■■■□□ 2.12
CDHR3-212ENST00000487084 NOB1Q9ULX3 412 aaKnown RBP28.29■■■□□ 2.12
CDHR3-212ENST00000487084 RAD17O75943 681 aa28.28■■■□□ 2.12
CDHR3-212ENST00000487084 RARSP54136 660 aaKnown RBP28.28■■■□□ 2.12
CDHR3-212ENST00000487084 EAPPQ56P03 285 aaPredicted RBP28.28■■■□□ 2.12
CDHR3-212ENST00000487084 EPHA10Q5JZY3 1008 aa28.28■■■□□ 2.12
CDHR3-212ENST00000487084 LMBR1LQ6UX01 489 aa28.28■■■□□ 2.12
CDHR3-212ENST00000487084 MPHOSPH8Q99549 860 aa28.28■■■□□ 2.12
CDHR3-212ENST00000487084 MINPP1Q9UNW1 487 aa28.28■■■□□ 2.12
CDHR3-212ENST00000487084 LTBP1Q14766 1721 aa28.28■■■□□ 2.12
CDHR3-212ENST00000487084 SPEF2Q9C093 1822 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 POTEIP0CG38 1075 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 POTEJP0CG39 1038 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 EPHX2P34913 555 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 IFIT5Q13325 482 aaKnown RBP28.27■■■□□ 2.12
CDHR3-212ENST00000487084 DOK7Q18PE1 504 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 CIAPIN1Q6FI81 312 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 ZC3H12CQ9C0D7 883 aaKnown RBP28.27■■■□□ 2.12
CDHR3-212ENST00000487084 SCN4AP35499 1836 aa28.27■■■□□ 2.12
CDHR3-212ENST00000487084 YDJCA8MPS7 323 aa28.26■■■□□ 2.11
CDHR3-212ENST00000487084 G3V3G9 751 aa28.26■■■□□ 2.11
CDHR3-212ENST00000487084 NBPF7P0C2Y1 421 aaPredicted RBP28.26■■■□□ 2.11
CDHR3-212ENST00000487084 DCAF8Q5TAQ9 597 aa28.26■■■□□ 2.11
CDHR3-212ENST00000487084 SUCLG2Q96I99 432 aa28.26■■■□□ 2.11
CDHR3-212ENST00000487084 ECE2O60344 883 aa28.25■■■□□ 2.11
CDHR3-212ENST00000487084 ATP2B4P23634 1241 aa28.25■■■□□ 2.11
CDHR3-212ENST00000487084 SCNN1DP51172 638 aa28.24■■■□□ 2.11
CDHR3-212ENST00000487084 TNIP1Q15025 636 aa28.24■■■□□ 2.11
CDHR3-212ENST00000487084 CCDC57Q2TAC2 916 aa28.23■■■□□ 2.11
CDHR3-212ENST00000487084 TAF7LQ5H9L4 462 aa28.23■■■□□ 2.11
CDHR3-212ENST00000487084 CHADLQ6NUI6 762 aa28.23■■■□□ 2.11
CDHR3-212ENST00000487084 CLEC11AQ9Y240 323 aa28.23■■■□□ 2.11
CDHR3-212ENST00000487084 EPS15P42566 896 aa28.22■■■□□ 2.11
CDHR3-212ENST00000487084 GMPSP49915 693 aaPredicted RBP28.22■■■□□ 2.11
CDHR3-212ENST00000487084 APLP1P51693 650 aa28.22■■■□□ 2.11
CDHR3-212ENST00000487084 PNMA8AQ86V59 439 aaPredicted RBP28.22■■■□□ 2.11
CDHR3-212ENST00000487084 LDHDQ86WU2 507 aa28.22■■■□□ 2.11
CDHR3-212ENST00000487084 API5Q9BZZ5 524 aaKnown RBP28.22■■■□□ 2.11
CDHR3-212ENST00000487084 UTYO14607 1347 aa28.21■■■□□ 2.11
CDHR3-212ENST00000487084 ZBED9Q6R2W3 1325 aa28.21■■■□□ 2.11
CDHR3-212ENST00000487084 KIF16BQ96L93 1317 aa28.21■■■□□ 2.11
CDHR3-212ENST00000487084 CCT4P50991 539 aaKnown RBP28.21■■■□□ 2.11
CDHR3-212ENST00000487084 BRPF1P55201 1214 aaPredicted RBP28.21■■■□□ 2.11
CDHR3-212ENST00000487084 WTIPA6NIX2 430 aaPredicted RBP28.2■■■□□ 2.1
CDHR3-212ENST00000487084 ANKRD2Q9GZV1 360 aa28.2■■■□□ 2.1
CDHR3-212ENST00000487084 PSMD14O00487 310 aa28.19■■■□□ 2.1
CDHR3-212ENST00000487084 KAZALD1Q96I82 304 aa28.19■■■□□ 2.1
CDHR3-212ENST00000487084 ZNF594Q96JF6 807 aaPredicted RBP28.19■■■□□ 2.1
CDHR3-212ENST00000487084 BICC1Q9H694 974 aaKnown RBP28.19■■■□□ 2.1
CDHR3-212ENST00000487084 GPRC5DQ9NZD1 345 aa28.19■■■□□ 2.1
CDHR3-212ENST00000487084 KCNJ4P48050 445 aa28.18■■■□□ 2.1
CDHR3-212ENST00000487084 CHRNDQ07001 517 aa28.18■■■□□ 2.1
CDHR3-212ENST00000487084 USP44Q9H0E7 712 aa28.18■■■□□ 2.1
CDHR3-212ENST00000487084 KCNQ5Q9NR82 932 aa28.18■■■□□ 2.1
CDHR3-212ENST00000487084 LEMD3Q9Y2U8 911 aa28.17■■■□□ 2.1
CDHR3-212ENST00000487084 ZBTB12Q9Y330 459 aaPredicted RBP28.17■■■□□ 2.1
CDHR3-212ENST00000487084 MED23Q9ULK4 1368 aa28.16■■■□□ 2.1
CDHR3-212ENST00000487084 BCAR3O75815 825 aa28.16■■■□□ 2.1
CDHR3-212ENST00000487084 FRAT1Q92837 279 aaPredicted RBP28.16■■■□□ 2.1
CDHR3-212ENST00000487084 CNNM1Q9NRU3 951 aa28.16■■■□□ 2.1
CDHR3-212ENST00000487084 ZNF804BA4D1E1 1349 aa28.16■■■□□ 2.1
CDHR3-212ENST00000487084 HTRA3P83110 453 aa28.15■■■□□ 2.1
CDHR3-212ENST00000487084 LDHAL6AQ6ZMR3 332 aa28.15■■■□□ 2.1
CDHR3-212ENST00000487084 HELBQ8NG08 1087 aaPredicted RBP28.15■■■□□ 2.1
CDHR3-212ENST00000487084 ADARB2Q9NS39 739 aaKnown RBP28.15■■■□□ 2.1
CDHR3-212ENST00000487084 ANKRD44Q8N8A2 993 aa28.14■■■□□ 2.1
CDHR3-212ENST00000487084 TAF5LO75529 589 aa28.13■■■□□ 2.09
CDHR3-212ENST00000487084 USP50Q70EL3 339 aaPredicted RBP28.13■■■□□ 2.09
CDHR3-212ENST00000487084 ARHGAP45Q92619 1136 aa28.13■■■□□ 2.09
CDHR3-212ENST00000487084 IPO8O15397 1037 aaKnown RBP28.12■■■□□ 2.09
CDHR3-212ENST00000487084 PLIN1O60240 522 aa28.12■■■□□ 2.09
CDHR3-212ENST00000487084 RABL6Q3YEC7 729 aaPredicted RBP28.12■■■□□ 2.09
CDHR3-212ENST00000487084 MAP1SQ66K74 1059 aaPredicted RBP28.12■■■□□ 2.09
CDHR3-212ENST00000487084 MICALL2Q8IY33 904 aa28.12■■■□□ 2.09
CDHR3-212ENST00000487084 CNOT7Q9UIV1 285 aaKnown RBP28.12■■■□□ 2.09
CDHR3-212ENST00000487084 SHTN1A0MZ66 631 aa28.11■■■□□ 2.09
CDHR3-212ENST00000487084 UBTFL1P0CB47 393 aaPredicted RBP28.11■■■□□ 2.09
CDHR3-212ENST00000487084 KLRK1P26718 216 aa28.11■■■□□ 2.09
CDHR3-212ENST00000487084 TXNRD3Q86VQ6 643 aa28.11■■■□□ 2.09
CDHR3-212ENST00000487084 ADAMTSL1Q8N6G6 1762 aa28.1■■■□□ 2.09
CDHR3-212ENST00000487084 H7C1D1 291 aa28.1■■■□□ 2.09
CDHR3-212ENST00000487084 SNAP23O00161 211 aa28.1■■■□□ 2.09
CDHR3-212ENST00000487084 PODNQ7Z5L7 613 aa28.1■■■□□ 2.09
CDHR3-212ENST00000487084 FBXW7Q969H0 707 aa28.1■■■□□ 2.09
CDHR3-212ENST00000487084 RPS12P25398 132 aaKnown RBP28.09■■■□□ 2.09
CDHR3-212ENST00000487084 CNTROBQ8N137 903 aa28.09■■■□□ 2.09
CDHR3-212ENST00000487084 PUS3Q9BZE2 481 aaKnown RBP28.09■■■□□ 2.09
CDHR3-212ENST00000487084 SCN9AQ15858 1988 aa28.08■■■□□ 2.09
CDHR3-212ENST00000487084 VIL1P09327 827 aaKnown RBP28.08■■■□□ 2.09
CDHR3-212ENST00000487084 TRIM27P14373 513 aa28.08■■■□□ 2.09
CDHR3-212ENST00000487084 ATF7IPQ6VMQ6 1270 aa28.08■■■□□ 2.09
CDHR3-212ENST00000487084 TRPM4Q8TD43 1214 aa28.08■■■□□ 2.09
CDHR3-212ENST00000487084 DPF2Q92785 391 aa28.08■■■□□ 2.09
CDHR3-212ENST00000487084 COA1Q9GZY4 146 aa28.08■■■□□ 2.09
CDHR3-212ENST00000487084 CEP350Q5VT06 3117 aa28.07■■■□□ 2.08
CDHR3-212ENST00000487084 CLUAP1Q96AJ1 413 aa28.07■■■□□ 2.08
CDHR3-212ENST00000487084 TNNQ9UQP3 1299 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms