RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ITGA6P23229 1130 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 CHMLP26374 656 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 GTF2E1P29083 439 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-206ENST00000487062 RFC4P35249 363 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 RBM25P49756 843 aaKnown RBP8.57□□□□□ -1.04
SF3A3-206ENST00000487062 CCDC152Q4G0S7 254 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 LDHAL6AQ6ZMR3 332 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 SYNE4Q8N205 404 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 RUFY2Q8WXA3 655 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 ZNF594Q96JF6 807 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-206ENST00000487062 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 RTL9Q8NET4 1388 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 SPEF2Q9C093 1822 aa8.57□□□□□ -1.04
SF3A3-206ENST00000487062 ZNF609O15014 1411 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 EPB41L2O43491 1005 aaKnown RBP8.56□□□□□ -1.04
SF3A3-206ENST00000487062 HCLS1P14317 486 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-206ENST00000487062 ATP5JP18859 108 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 MCCP23508 829 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 LRRC24Q50LG9 513 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 RASEFQ8IZ41 740 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
SF3A3-206ENST00000487062 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-206ENST00000487062 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 GREM2Q9H772 168 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 CNNM1Q9NRU3 951 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 DIAPH3Q9NSV4 1193 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 RGPD3A6NKT7 1758 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-206ENST00000487062 RGPD4Q7Z3J3 1758 aa8.56□□□□□ -1.04
SF3A3-206ENST00000487062 LRP5O75197 1615 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 PLSCR1O15162 318 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 MAP4K4O95819 1239 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 SSFA2P28290 1259 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 IGHMBP2P38935 993 aaKnown RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 TXNRD1Q16881 649 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 METTL24Q5JXM2 366 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 GORABQ5T7V8 394 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 TBC1D9BQ66K14 1250 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 TPTE2Q6XPS3 522 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 SP7Q8TDD2 431 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 USP26Q9BXU7 913 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 PUS3Q9BZE2 481 aaKnown RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 CREBZFQ9NS37 354 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 LRRC4BQ9NT99 713 aa8.55□□□□□ -1.04
SF3A3-206ENST00000487062 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 DBNLQ9UJU6 430 aaKnown RBP8.55□□□□□ -1.04
SF3A3-206ENST00000487062 MROH5Q6ZUA9 1318 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 ARAP2Q8WZ64 1704 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 TNS1Q9HBL0 1735 aaKnown RBP8.54□□□□□ -1.04
SF3A3-206ENST00000487062 A0A1B0GUL7 405 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 NPHP1O15259 732 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 PHF14O94880 888 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 APBA3O96018 575 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 ATP2B3Q16720 1220 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 CCDC158Q5M9N0 1113 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 SLC10A5Q5PT55 438 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
SF3A3-206ENST00000487062 CDC5LQ99459 802 aaKnown RBP8.54□□□□□ -1.04
SF3A3-206ENST00000487062 DBNDD2Q9BQY9 259 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 BOLA2Q9H3K6 86 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 RIPOR2Q9Y4F9 1068 aa8.54□□□□□ -1.04
SF3A3-206ENST00000487062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.54□□□□□ -1.04
SF3A3-206ENST00000487062 RFX7Q2KHR2 1363 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 CARMIL3Q8ND23 1372 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.53□□□□□ -1.04
SF3A3-206ENST00000487062 TIMM10P62072 90 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 SF3B3Q15393 1217 aaKnown RBP8.53□□□□□ -1.04
SF3A3-206ENST00000487062 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
SF3A3-206ENST00000487062 ERFEQ4G0M1 354 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 TTC39AQ5SRH9 613 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 KIAA1211Q6ZU35 1233 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 ZC3H15Q8WU90 426 aaKnown RBP8.53□□□□□ -1.04
SF3A3-206ENST00000487062 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 HAUS7Q99871 368 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 FSD1Q9BTV5 496 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 ANO2Q9NQ90 1003 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 RIC1Q4ADV7 1423 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 RAD50Q92878 1312 aa8.53□□□□□ -1.04
SF3A3-206ENST00000487062 SGSM2O43147 1006 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 PDE8BO95263 885 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 IFIT1P09914 478 aaKnown RBP8.52□□□□□ -1.05
SF3A3-206ENST00000487062 RABEP1Q15276 862 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 ANKRD18AQ8IVF6 992 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 HSCBQ8IWL3 235 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 FLAD1Q8NFF5 587 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 XAGE2Q96GT9 111 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 DNAJC2Q99543 621 aaKnown RBP8.52□□□□□ -1.05
SF3A3-206ENST00000487062 WDR70Q9NW82 654 aa8.52□□□□□ -1.05
SF3A3-206ENST00000487062 A0A1B0GUL6 1792 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms