RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 PIK3R4Q99570 1358 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 XRN1Q8IZH2 1706 aaKnown RBP9□□□□□ -0.97
SMARCAL1-212ENST00000486983 USP6P35125 1406 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 SSH2Q76I76 1423 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 ESPNB1AK53 854 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 IL13P35225 146 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
SMARCAL1-212ENST00000486983 RIPK4P57078 832 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 LMOD3Q0VAK6 560 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 MVPQ14764 893 aaKnown RBP9□□□□□ -0.97
SMARCAL1-212ENST00000486983 ALDH1L2Q3SY69 923 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 EPS8L1Q8TE68 723 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 COG3Q96JB2 828 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 CYLDQ9NQC7 956 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 EID1Q9Y6B2 187 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 PRR36Q9H6K5 1346 aa9□□□□□ -0.97
SMARCAL1-212ENST00000486983 USP31Q70CQ4 1352 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 ANKARQ7Z5J8 1434 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 PTPRUQ92729 1446 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 BCRP11274 1271 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 NFE2L2Q16236 605 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 DBN1Q16643 649 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 C8orf34Q49A92 452 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 PODNQ7Z5L7 613 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 NEDD1Q8NHV4 660 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 PANK1Q8TE04 598 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 FRAT1Q92837 279 aaPredicted RBP8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 ACDQ96AP0 544 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 GMCL1Q96IK5 515 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 TBX22Q9Y458 520 aa8.99□□□□□ -0.97
SMARCAL1-212ENST00000486983 VIRMAQ69YN4 1812 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 USP54Q70EL1 1684 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 LTKP29376 864 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 PRKAR2BP31323 418 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 EXOSC9Q06265 439 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 RIPOR1Q6ZS17 1223 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 NME9Q86XW9 330 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 DZIP1LQ8IYY4 767 aaKnown RBP8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 BEND7Q8N7W2 519 aaPredicted RBP8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 IFT57Q9NWB7 429 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 TTC21AQ8NDW8 1320 aa8.98□□□□□ -0.97
SMARCAL1-212ENST00000486983 RGPD1P0DJD0 1748 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 IPO8O15397 1037 aaKnown RBP8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 IGHDP01880 384 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 RLBP1P12271 317 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 ATF7IPQ6VMQ6 1270 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 FTSJ3Q8IY81 847 aaKnown RBP8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 GALNT6Q8NCL4 622 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 TSR2Q969E8 191 aaKnown RBP8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 GTPBP3Q969Y2 492 aaKnown RBP8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 RWDD1Q9H446 243 aaPredicted RBP8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 SMC4Q9NTJ3 1288 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 TTC21BQ7Z4L5 1316 aa8.97□□□□□ -0.97
SMARCAL1-212ENST00000486983 STRCQ7RTU9 1775 aa8.96□□□□□ -0.97
SMARCAL1-212ENST00000486983 MAP2P11137 1827 aaKnown RBP8.96□□□□□ -0.97
SMARCAL1-212ENST00000486983 CEP170BQ9Y4F5 1589 aaPredicted RBP8.96□□□□□ -0.97
SMARCAL1-212ENST00000486983 ZNF853P0CG23 659 aa8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 GNAI1P63096 354 aa8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 HDAC1Q13547 482 aaPredicted RBP8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 FOXR1Q6PIV2 292 aa8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 THEMISQ8N1K5 641 aaPredicted RBP8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 SSH1Q8WYL5 1049 aa8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 ARHGAP45Q92619 1136 aa8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 CHMP4BQ9H444 224 aaKnown RBP8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 ZNF142P52746 1687 aaPredicted RBP8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 KIF24Q5T7B8 1368 aa8.96□□□□□ -0.98
SMARCAL1-212ENST00000486983 TRIM27P14373 513 aa8.95□□□□□ -0.98
SMARCAL1-212ENST00000486983 PPP2R2DQ66LE6 453 aa8.95□□□□□ -0.98
SMARCAL1-212ENST00000486983 PROCA1Q8NCQ7 364 aaPredicted RBP8.95□□□□□ -0.98
SMARCAL1-212ENST00000486983 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMARCAL1-212ENST00000486983 ACEP12821 1306 aa8.95□□□□□ -0.98
SMARCAL1-212ENST00000486983 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
SMARCAL1-212ENST00000486983 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
SMARCAL1-212ENST00000486983 AP1G2O75843 785 aa8.94□□□□□ -0.98
SMARCAL1-212ENST00000486983 BCL2L13Q9BXK5 485 aa8.94□□□□□ -0.98
SMARCAL1-212ENST00000486983 DYRK1BQ9Y463 629 aa8.94□□□□□ -0.98
SMARCAL1-212ENST00000486983 MEN1O00255 615 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 GPC1P35052 558 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 SKIV2LQ15477 1246 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 SKAP1Q86WV1 359 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 SEPT12Q8IYM1 358 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 PHACTR3Q96KR7 559 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 PEAK1Q9H792 1746 aa8.93□□□□□ -0.98
SMARCAL1-212ENST00000486983 FMN2Q9NZ56 1722 aa8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 FLT4P35916 1363 aa8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 KDRP35968 1356 aa8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 RGS3P49796 1198 aa8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 TRERF1Q96PN7 1200 aa8.92□□□□□ -0.98
SMARCAL1-212ENST00000486983 GAS2L1Q99501 681 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms