RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
SF1-216ENST00000486867 KIF3CO14782 793 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 PPIP5K2O43314 1243 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 GNAI3P08754 354 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
SF1-216ENST00000486867 AOC3Q16853 763 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 LARGE2Q8N3Y3 721 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 JDP2Q8WYK2 163 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
SF1-216ENST00000486867 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
SF1-216ENST00000486867 ZNF541Q9H0D2 1346 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 RLBP1P12271 317 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 ATP2B4P23634 1241 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 MTX1Q13505 466 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 DPY19L2Q6NUT2 758 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 DZIP1LQ8IYY4 767 aaKnown RBP16.53■□□□□ 0.24
SF1-216ENST00000486867 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 EYA3Q99504 573 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 MPHOSPH8Q99549 860 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 GGA1Q9UJY5 639 aa16.53■□□□□ 0.24
SF1-216ENST00000486867 MED23Q9ULK4 1368 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 POTECB2RU33 542 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 RFX5P48382 616 aaPredicted RBP16.52■□□□□ 0.24
SF1-216ENST00000486867 WASHC4Q2M389 1173 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 NIM1KQ8IY84 436 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 ANKRD2Q9GZV1 360 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 ANKIB1Q9P2G1 1089 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
SF1-216ENST00000486867 ZNF609O15014 1411 aa16.52■□□□□ 0.23
SF1-216ENST00000486867 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
SF1-216ENST00000486867 UFL1O94874 794 aa16.51■□□□□ 0.23
SF1-216ENST00000486867 CHRNDQ07001 517 aa16.51■□□□□ 0.23
SF1-216ENST00000486867 C15orf52Q6ZUT6 534 aaKnown RBP16.51■□□□□ 0.23
SF1-216ENST00000486867 GPC2Q8N158 579 aa16.51■□□□□ 0.23
SF1-216ENST00000486867 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
SF1-216ENST00000486867 RIPOR2Q9Y4F9 1068 aa16.51■□□□□ 0.23
SF1-216ENST00000486867 LRRFIP2Q9Y608 721 aaKnown RBP16.51■□□□□ 0.23
SF1-216ENST00000486867 ARAP2Q8WZ64 1704 aa16.5■□□□□ 0.23
SF1-216ENST00000486867 YDJCA8MPS7 323 aa16.5■□□□□ 0.23
SF1-216ENST00000486867 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
SF1-216ENST00000486867 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
SF1-216ENST00000486867 ZNF526Q8TF50 670 aaPredicted RBP16.5■□□□□ 0.23
SF1-216ENST00000486867 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
SF1-216ENST00000486867 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
SF1-216ENST00000486867 MYH13Q9UKX3 1938 aa16.49■□□□□ 0.23
SF1-216ENST00000486867 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
SF1-216ENST00000486867 MS4A1P11836 297 aa16.49■□□□□ 0.23
SF1-216ENST00000486867 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
SF1-216ENST00000486867 EIF6P56537 245 aaKnown RBP16.49■□□□□ 0.23
SF1-216ENST00000486867 CXCL9Q07325 125 aa16.49■□□□□ 0.23
SF1-216ENST00000486867 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
SF1-216ENST00000486867 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
SF1-216ENST00000486867 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
SF1-216ENST00000486867 ZC3H12CQ9C0D7 883 aaKnown RBP16.48■□□□□ 0.23
SF1-216ENST00000486867 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
SF1-216ENST00000486867 GNAI2P04899 355 aa16.47■□□□□ 0.23
SF1-216ENST00000486867 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
SF1-216ENST00000486867 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
SF1-216ENST00000486867 GPR101Q96P66 508 aaPredicted RBP16.47■□□□□ 0.23
SF1-216ENST00000486867 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
SF1-216ENST00000486867 RRAGCQ9HB90 399 aa16.47■□□□□ 0.23
SF1-216ENST00000486867 MROH5Q6ZUA9 1318 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 ECE2O60344 883 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 CIAO1O76071 339 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 PDE3AQ14432 1141 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
SF1-216ENST00000486867 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 EYA2O00167 538 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 TOMM70O94826 608 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 SCNN1DP51172 638 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 UBE4AQ14139 1066 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 TNIP1Q15025 636 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 LRRC24Q50LG9 513 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 CIAPIN1Q6FI81 312 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 PODNQ7Z5L7 613 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
SF1-216ENST00000486867 POLR2AP24928 1970 aaKnown RBP16.45■□□□□ 0.22
SF1-216ENST00000486867 TAF5LO75529 589 aa16.44■□□□□ 0.22
SF1-216ENST00000486867 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
SF1-216ENST00000486867 ITPRIPQ8IWB1 547 aa16.44■□□□□ 0.22
SF1-216ENST00000486867 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
SF1-216ENST00000486867 KLHDC4Q8TBB5 520 aa16.44■□□□□ 0.22
SF1-216ENST00000486867 RBM46Q8TBY0 533 aaKnown RBP16.44■□□□□ 0.22
SF1-216ENST00000486867 COA1Q9GZY4 146 aa16.44■□□□□ 0.22
SF1-216ENST00000486867 VIL1P09327 827 aaKnown RBP16.43■□□□□ 0.22
SF1-216ENST00000486867 KLRK1P26718 216 aa16.43■□□□□ 0.22
SF1-216ENST00000486867 DOK7Q18PE1 504 aa16.43■□□□□ 0.22
SF1-216ENST00000486867 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
SF1-216ENST00000486867 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
SF1-216ENST00000486867 TAF1DQ9H5J8 278 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms