RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CRB1P82279 1406 aa15.5■□□□□ 0.07
HMGN1-216ENST00000486741 AGLP35573 1532 aa15.5■□□□□ 0.07
HMGN1-216ENST00000486741 XAGE2Q96GT9 111 aa15.5■□□□□ 0.07
HMGN1-216ENST00000486741 BIN1O00499 593 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 DBNLQ9UJU6 430 aaKnown RBP15.49■□□□□ 0.07
HMGN1-216ENST00000486741 AOX1Q06278 1338 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 SASH1O94885 1247 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 IGKV5-2P06315 115 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
HMGN1-216ENST00000486741 TMEM67Q5HYA8 995 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 NCOA7Q8NI08 942 aa15.49■□□□□ 0.07
HMGN1-216ENST00000486741 NAT10Q9H0A0 1025 aaKnown RBP15.49■□□□□ 0.07
HMGN1-216ENST00000486741 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-216ENST00000486741 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 PDILTQ8N807 584 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 SLC12A7Q9Y666 1083 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 CCAR2Q8N163 923 aaKnown RBP15.48■□□□□ 0.07
HMGN1-216ENST00000486741 LMBRD1Q9NUN5 540 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 DACT1Q9NYF0 836 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 ANKARQ7Z5J8 1434 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 FSIP1Q8NA03 581 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 MCM5P33992 734 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
HMGN1-216ENST00000486741 DLC1Q96QB1 1528 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 CDC42BPGQ6DT37 1551 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 PRC1O43663 620 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 KCNQ4P56696 695 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 JAK2O60674 1132 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 CDKL5O76039 1030 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 ME3Q16798 604 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 CCDC152Q4G0S7 254 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 GAS2L3Q86XJ1 694 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 RBSNQ9H1K0 784 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 BRMS1Q9HCU9 246 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 ZAP70P43403 619 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 SLFNL1Q499Z3 407 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 NBPF5PQ86XG9 351 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-216ENST00000486741 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
HMGN1-216ENST00000486741 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
HMGN1-216ENST00000486741 HOOK1Q9UJC3 728 aaKnown RBP15.47■□□□□ 0.07
HMGN1-216ENST00000486741 RPS6KB1P23443 525 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
HMGN1-216ENST00000486741 CDC5LQ99459 802 aaKnown RBP15.46■□□□□ 0.07
HMGN1-216ENST00000486741 ARHGEF28Q8N1W1 1705 aaKnown RBP15.46■□□□□ 0.07
HMGN1-216ENST00000486741 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 TTLL5Q6EMB2 1281 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 LMTK3Q96Q04 1460 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 ADCY5O95622 1261 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 SLC3A2P08195 630 aaKnown RBP15.46■□□□□ 0.07
HMGN1-216ENST00000486741 CYP7A1P22680 504 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 TTF1Q15361 905 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-216ENST00000486741 MAGEB6Q8N7X4 407 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 PI4K2BQ8TCG2 481 aa15.46■□□□□ 0.07
HMGN1-216ENST00000486741 LSG1Q9H089 658 aaKnown RBP15.46■□□□□ 0.07
HMGN1-216ENST00000486741 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.06
HMGN1-216ENST00000486741 ZNF589Q86UQ0 364 aaPredicted RBP15.46■□□□□ 0.06
HMGN1-216ENST00000486741 KLHL34Q8N239 644 aa15.46■□□□□ 0.06
HMGN1-216ENST00000486741 POLA2Q14181 598 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ZKSCAN3Q9BRR0 538 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 SLC26A6Q9BXS9 759 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 TMEM63CQ9P1W3 806 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ATP5JP18859 108 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 KIF2CQ99661 725 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 MYOM1P52179 1685 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ADGRL3Q9HAR2 1447 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 PTPDC1A2A3K4 754 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 CLSTN1O94985 981 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-216ENST00000486741 IARSP41252 1262 aaKnown RBP15.45■□□□□ 0.06
HMGN1-216ENST00000486741 MFSD6Q6ZSS7 791 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
HMGN1-216ENST00000486741 CCAR1Q8IX12 1150 aaKnown RBP15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ZMYND15Q9H091 742 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
HMGN1-216ENST00000486741 SLC4A4Q9Y6R1 1079 aa15.45■□□□□ 0.06
HMGN1-216ENST00000486741 ANKRD18AQ8IVF6 992 aa15.44■□□□□ 0.06
HMGN1-216ENST00000486741 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
HMGN1-216ENST00000486741 USP5P45974 858 aa15.44■□□□□ 0.06
HMGN1-216ENST00000486741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.068e-8■■□□□ 13
HMGN1-216ENST00000486741 COL3A1P02461 1466 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-216ENST00000486741 TPCN1Q9ULQ1 816 aa15.44■□□□□ 0.06
HMGN1-216ENST00000486741 WDR17Q8IZU2 1322 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 BRD1O95696 1058 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 UQCRFS1P1P0C7P4 283 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 ADORA1P30542 326 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 SERPINC1P01008 464 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 MARCKSP29966 332 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-216ENST00000486741 PTPN12Q05209 780 aaKnown RBP15.43■□□□□ 0.06
HMGN1-216ENST00000486741 PI16Q6UXB8 463 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 CDC37L1Q7L3B6 337 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 CEP57L1Q8IYX8 460 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 SYNE4Q8N205 404 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms