RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
SSR4-211ENST00000486204 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
SSR4-211ENST00000486204 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
SSR4-211ENST00000486204 ADARB2Q9NS39 739 aaKnown RBP16.44■□□□□ 0.22
SSR4-211ENST00000486204 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
SSR4-211ENST00000486204 FAM89AQ96GI7 184 aa16.43■□□□□ 0.22
SSR4-211ENST00000486204 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
SSR4-211ENST00000486204 CWC25Q9NXE8 425 aaPredicted RBP16.43■□□□□ 0.22
SSR4-211ENST00000486204 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
SSR4-211ENST00000486204 COL4A5P29400 1685 aa16.43■□□□□ 0.22
SSR4-211ENST00000486204 PTPRCP08575 1304 aa16.43■□□□□ 0.22
SSR4-211ENST00000486204 NEXNQ0ZGT2 675 aa16.42■□□□□ 0.22
SSR4-211ENST00000486204 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
SSR4-211ENST00000486204 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
SSR4-211ENST00000486204 SNED1Q8TER0 1413 aa16.42■□□□□ 0.22
SSR4-211ENST00000486204 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
SSR4-211ENST00000486204 HCLS1P14317 486 aaPredicted RBP16.41■□□□□ 0.22
SSR4-211ENST00000486204 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
SSR4-211ENST00000486204 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
SSR4-211ENST00000486204 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
SSR4-211ENST00000486204 CDHR2Q9BYE9 1310 aa16.41■□□□□ 0.22
SSR4-211ENST00000486204 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
SSR4-211ENST00000486204 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
SSR4-211ENST00000486204 SAGE1Q9NXZ1 904 aa16.4■□□□□ 0.22
SSR4-211ENST00000486204 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
SSR4-211ENST00000486204 CASP7P55210 303 aa16.39■□□□□ 0.21
SSR4-211ENST00000486204 HUNKP57058 714 aa16.39■□□□□ 0.21
SSR4-211ENST00000486204 GCKRQ14397 625 aa16.39■□□□□ 0.21
SSR4-211ENST00000486204 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
SSR4-211ENST00000486204 JARID2Q92833 1246 aaPredicted RBP16.39■□□□□ 0.21
SSR4-211ENST00000486204 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
SSR4-211ENST00000486204 H7C1W4 665 aa16.38■□□□□ 0.21
SSR4-211ENST00000486204 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
SSR4-211ENST00000486204 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
SSR4-211ENST00000486204 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
SSR4-211ENST00000486204 NOB1Q9ULX3 412 aaKnown RBP16.38■□□□□ 0.21
SSR4-211ENST00000486204 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
SSR4-211ENST00000486204 BCAR3O75815 825 aa16.37■□□□□ 0.21
SSR4-211ENST00000486204 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
SSR4-211ENST00000486204 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 TRPA1O75762 1119 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 ALDH1L1O75891 902 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 GMPSP49915 693 aaPredicted RBP16.36■□□□□ 0.21
SSR4-211ENST00000486204 CXCL9Q07325 125 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
SSR4-211ENST00000486204 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 UBE3BQ7Z3V4 1068 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
SSR4-211ENST00000486204 RPGRQ92834 1020 aaKnown RBP16.36■□□□□ 0.21
SSR4-211ENST00000486204 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 ABCC4O15439 1325 aa16.36■□□□□ 0.21
SSR4-211ENST00000486204 DUOX1Q9NRD9 1551 aa16.35■□□□□ 0.21
SSR4-211ENST00000486204 FAM155AB1AL88 458 aaPredicted RBP16.35■□□□□ 0.21
SSR4-211ENST00000486204 PDE8AO60658 829 aa16.35■□□□□ 0.21
SSR4-211ENST00000486204 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
SSR4-211ENST00000486204 KIF23Q02241 960 aaPredicted RBP16.35■□□□□ 0.21
SSR4-211ENST00000486204 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
SSR4-211ENST00000486204 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
SSR4-211ENST00000486204 SRCIN1Q9C0H9 1055 aa16.35■□□□□ 0.21
SSR4-211ENST00000486204 AOC3Q16853 763 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 USP48Q86UV5 1035 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 ARHGAP45Q92619 1136 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
SSR4-211ENST00000486204 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
SSR4-211ENST00000486204 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
SSR4-211ENST00000486204 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
SSR4-211ENST00000486204 PLA2G12BQ9BX93 195 aa16.33■□□□□ 0.2
SSR4-211ENST00000486204 API5Q9BZZ5 524 aaKnown RBP16.33■□□□□ 0.2
SSR4-211ENST00000486204 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
SSR4-211ENST00000486204 UTYO14607 1347 aa16.33■□□□□ 0.2
SSR4-211ENST00000486204 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
SSR4-211ENST00000486204 GRM8O00222 908 aa16.32■□□□□ 0.2
SSR4-211ENST00000486204 TRIM27P14373 513 aa16.32■□□□□ 0.2
SSR4-211ENST00000486204 CTSWP56202 376 aa16.32■□□□□ 0.2
SSR4-211ENST00000486204 DLK2Q6UY11 383 aa16.32■□□□□ 0.2
SSR4-211ENST00000486204 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
SSR4-211ENST00000486204 HSP90B1P14625 803 aaKnown RBP16.31■□□□□ 0.2
SSR4-211ENST00000486204 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
SSR4-211ENST00000486204 GRAPQ13588 217 aa16.31■□□□□ 0.2
SSR4-211ENST00000486204 HABP4Q5JVS0 413 aaKnown RBP16.31■□□□□ 0.2
SSR4-211ENST00000486204 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
SSR4-211ENST00000486204 GRAPLQ8TC17 118 aaPredicted RBP16.31■□□□□ 0.2
SSR4-211ENST00000486204 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
SSR4-211ENST00000486204 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
SSR4-211ENST00000486204 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
SSR4-211ENST00000486204 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
SSR4-211ENST00000486204 CELF1Q92879 486 aaKnown RBP16.3■□□□□ 0.2
SSR4-211ENST00000486204 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
SSR4-211ENST00000486204 SEC31BQ9NQW1 1179 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
SSR4-211ENST00000486204 PSME4Q14997 1843 aa16.3■□□□□ 0.2
SSR4-211ENST00000486204 H7C1D1 291 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms