RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 SULF1Q8IWU6 871 aa21.03■□□□□ 0.96
PDE6D-205ENST00000486044 ZIC5Q96T25 663 aa21.03■□□□□ 0.96
PDE6D-205ENST00000486044 SAGE1Q9NXZ1 904 aa21.03■□□□□ 0.96
PDE6D-205ENST00000486044 ZNF157P51786 506 aaPredicted RBP21.02■□□□□ 0.96
PDE6D-205ENST00000486044 RTL5Q5HYW3 569 aaPredicted RBP21.02■□□□□ 0.96
PDE6D-205ENST00000486044 DLK2Q6UY11 383 aa21.02■□□□□ 0.96
PDE6D-205ENST00000486044 CCDC146Q8IYE0 955 aa21.02■□□□□ 0.96
PDE6D-205ENST00000486044 TBC1D16Q8TBP0 767 aa21.02■□□□□ 0.96
PDE6D-205ENST00000486044 RUNDC1Q96C34 613 aa21.02■□□□□ 0.96
PDE6D-205ENST00000486044 FAM155AB1AL88 458 aaPredicted RBP21.01■□□□□ 0.95
PDE6D-205ENST00000486044 EGFRP00533 1210 aa21.01■□□□□ 0.95
PDE6D-205ENST00000486044 KIF4BQ2VIQ3 1234 aa21.01■□□□□ 0.95
PDE6D-205ENST00000486044 POLR2AP24928 1970 aaKnown RBP21.01■□□□□ 0.95
PDE6D-205ENST00000486044 ADM5C9JUS6 153 aa21■□□□□ 0.95
PDE6D-205ENST00000486044 VIL1P09327 827 aaKnown RBP21■□□□□ 0.95
PDE6D-205ENST00000486044 KIF23Q02241 960 aaPredicted RBP21■□□□□ 0.95
PDE6D-205ENST00000486044 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
PDE6D-205ENST00000486044 KCNQ5Q9NR82 932 aa21■□□□□ 0.95
PDE6D-205ENST00000486044 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
PDE6D-205ENST00000486044 ANKIB1Q9P2G1 1089 aa21■□□□□ 0.95
PDE6D-205ENST00000486044 TRIM35Q9UPQ4 493 aa21■□□□□ 0.95
PDE6D-205ENST00000486044 RTL9Q8NET4 1388 aa20.99■□□□□ 0.95
PDE6D-205ENST00000486044 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
PDE6D-205ENST00000486044 RIC3Q7Z5B4 369 aa20.99■□□□□ 0.95
PDE6D-205ENST00000486044 ZBTB38Q8NAP3 1195 aaPredicted RBP20.99■□□□□ 0.95
PDE6D-205ENST00000486044 GOLGA2Q08379 1002 aa20.98■□□□□ 0.95
PDE6D-205ENST00000486044 REM2Q8IYK8 340 aaPredicted RBP20.98■□□□□ 0.95
PDE6D-205ENST00000486044 GGA3Q9NZ52 723 aa20.98■□□□□ 0.95
PDE6D-205ENST00000486044 GGA1Q9UJY5 639 aa20.98■□□□□ 0.95
PDE6D-205ENST00000486044 UFL1O94874 794 aa20.97■□□□□ 0.95
PDE6D-205ENST00000486044 RNF186Q9NXI6 227 aa20.97■□□□□ 0.95
PDE6D-205ENST00000486044 MYBBP1AQ9BQG0 1328 aaKnown RBP20.97■□□□□ 0.95
PDE6D-205ENST00000486044 TRPA1O75762 1119 aa20.96■□□□□ 0.95
PDE6D-205ENST00000486044 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
PDE6D-205ENST00000486044 AGBL3Q8NEM8 1001 aa20.96■□□□□ 0.95
PDE6D-205ENST00000486044 SLC10A3P09131 477 aa20.95■□□□□ 0.94
PDE6D-205ENST00000486044 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
PDE6D-205ENST00000486044 AKAP11Q9UKA4 1901 aa20.94■□□□□ 0.94
PDE6D-205ENST00000486044 ZNF280AP59817 542 aaPredicted RBP20.94■□□□□ 0.94
PDE6D-205ENST00000486044 FKBP1BP68106 108 aa20.94■□□□□ 0.94
PDE6D-205ENST00000486044 RSBN1LQ6PCB5 846 aaPredicted RBP20.94■□□□□ 0.94
PDE6D-205ENST00000486044 CCDC191Q8NCU4 936 aa20.94■□□□□ 0.94
PDE6D-205ENST00000486044 SEC31BQ9NQW1 1179 aa20.94■□□□□ 0.94
PDE6D-205ENST00000486044 SCARF1Q14162 830 aa20.93■□□□□ 0.94
PDE6D-205ENST00000486044 ANGEL2Q5VTE6 544 aaKnown RBP20.93■□□□□ 0.94
PDE6D-205ENST00000486044 CSRNP1Q96S65 589 aa20.93■□□□□ 0.94
PDE6D-205ENST00000486044 CHMP4AQ9BY43 222 aa20.93■□□□□ 0.94
PDE6D-205ENST00000486044 PDE8AO60658 829 aa20.92■□□□□ 0.94
PDE6D-205ENST00000486044 PCCAP05165 728 aaPredicted RBP20.92■□□□□ 0.94
PDE6D-205ENST00000486044 USP17L8P0C7I0 530 aa20.92■□□□□ 0.94
PDE6D-205ENST00000486044 MBIPQ9NS73 344 aa20.92■□□□□ 0.94
PDE6D-205ENST00000486044 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
PDE6D-205ENST00000486044 ZNF609O15014 1411 aa20.92■□□□□ 0.94
PDE6D-205ENST00000486044 SCN9AQ15858 1988 aa20.92■□□□□ 0.94
PDE6D-205ENST00000486044 ASTN2O75129 1339 aaPredicted RBP20.91■□□□□ 0.94
PDE6D-205ENST00000486044 COL4A1P02462 1669 aa20.91■□□□□ 0.94
PDE6D-205ENST00000486044 XDHP47989 1333 aa20.91■□□□□ 0.94
PDE6D-205ENST00000486044 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
PDE6D-205ENST00000486044 PODNQ7Z5L7 613 aa20.91■□□□□ 0.94
PDE6D-205ENST00000486044 ANKRD18AQ8IVF6 992 aa20.91■□□□□ 0.94
PDE6D-205ENST00000486044 MYD88Q99836 296 aa20.91■□□□□ 0.94
PDE6D-205ENST00000486044 CWC25Q9NXE8 425 aaPredicted RBP20.91■□□□□ 0.94
PDE6D-205ENST00000486044 PITPNM2Q9BZ72 1349 aa20.9■□□□□ 0.94
PDE6D-205ENST00000486044 DDX58O95786 925 aaKnown RBP20.9■□□□□ 0.94
PDE6D-205ENST00000486044 ATP2B4P23634 1241 aa20.9■□□□□ 0.94
PDE6D-205ENST00000486044 CTU1Q7Z7A3 348 aaKnown RBP20.9■□□□□ 0.94
PDE6D-205ENST00000486044 PHAXQ9H814 394 aaKnown RBP20.9■□□□□ 0.94
PDE6D-205ENST00000486044 MYOZ2Q9NPC6 264 aa20.9■□□□□ 0.94
PDE6D-205ENST00000486044 USP17L3A6NCW0 530 aa20.89■□□□□ 0.93
PDE6D-205ENST00000486044 USP17L4A6NCW7 530 aa20.89■□□□□ 0.93
PDE6D-205ENST00000486044 USP17L1Q7RTZ2 530 aa20.89■□□□□ 0.93
PDE6D-205ENST00000486044 PCDH10Q9P2E7 1040 aa20.89■□□□□ 0.93
PDE6D-205ENST00000486044 GNAI1P63096 354 aa20.88■□□□□ 0.93
PDE6D-205ENST00000486044 RASAL3Q86YV0 1011 aa20.88■□□□□ 0.93
PDE6D-205ENST00000486044 GMLQ99445 158 aa20.88■□□□□ 0.93
PDE6D-205ENST00000486044 CDC5LQ99459 802 aaKnown RBP20.88■□□□□ 0.93
PDE6D-205ENST00000486044 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
PDE6D-205ENST00000486044 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
PDE6D-205ENST00000486044 ZNF853P0CG23 659 aa20.87■□□□□ 0.93
PDE6D-205ENST00000486044 SOX10P56693 466 aa20.87■□□□□ 0.93
PDE6D-205ENST00000486044 OGFOD1Q8N543 542 aa20.87■□□□□ 0.93
PDE6D-205ENST00000486044 CCDC85AQ96PX6 553 aaPredicted RBP20.87■□□□□ 0.93
PDE6D-205ENST00000486044 METTL22Q9BUU2 404 aaPredicted RBP20.87■□□□□ 0.93
PDE6D-205ENST00000486044 DDX10Q13206 875 aaKnown RBP20.86■□□□□ 0.93
PDE6D-205ENST00000486044 PKN2Q16513 984 aaKnown RBP20.86■□□□□ 0.93
PDE6D-205ENST00000486044 PAPPA2Q9BXP8 1791 aa20.86■□□□□ 0.93
PDE6D-205ENST00000486044 PSME4Q14997 1843 aa20.85■□□□□ 0.93
PDE6D-205ENST00000486044 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
PDE6D-205ENST00000486044 PDE4DIPQ5VU43 2346 aa20.84■□□□□ 0.93
PDE6D-205ENST00000486044 NF2P35240 595 aa20.84■□□□□ 0.93
PDE6D-205ENST00000486044 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
PDE6D-205ENST00000486044 HDAC9Q9UKV0 1011 aa20.84■□□□□ 0.93
PDE6D-205ENST00000486044 MMP14P50281 582 aa20.83■□□□□ 0.93
PDE6D-205ENST00000486044 CTSWP56202 376 aa20.83■□□□□ 0.93
PDE6D-205ENST00000486044 TTLL12Q14166 644 aaPredicted RBP20.83■□□□□ 0.93
PDE6D-205ENST00000486044 BSDC1Q9NW68 430 aaPredicted RBP20.83■□□□□ 0.93
PDE6D-205ENST00000486044 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
PDE6D-205ENST00000486044 UBE2Q2LH0YL09 131 aa20.82■□□□□ 0.92
PDE6D-205ENST00000486044 TNRC18O15417 2968 aaPredicted RBP20.82■□□□□ 0.92
PDE6D-205ENST00000486044 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms