RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 RGS12O14924 1447 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 ERVH48-1M5A8F1 160 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 DIAPH1O60610 1272 aaKnown RBP5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 ZNF853P0CG23 659 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 GSPT1P15170 499 aaKnown RBP5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 VEGFBP49765 207 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 RIPK4P57078 832 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 RELBQ01201 579 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 NR1H3Q13133 447 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 ZSCAN23Q3MJ62 389 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 MTERF4Q7Z6M4 381 aaKnown RBP5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 SIRT2Q8IXJ6 389 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 ZNF784Q8NCA9 323 aaPredicted RBP5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 AGBL1Q96MI9 1066 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 API5Q9BZZ5 524 aaKnown RBP5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 LMBRD1Q9NUN5 540 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 TERF2IPQ9NYB0 399 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 TBC1D2BQ9UPU7 963 aa5.75□□□□□ -1.49
SMARCC1-206ENST00000485737 U2SURPO15042 1029 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 FYB1O15117 783 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 GIGYF1O75420 1035 aaPredicted RBP5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 MSNP26038 577 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 NFE2L2Q16236 605 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 TTC22Q5TAA0 569 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 TMEM132EQ6IEE7 984 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 IL17RAQ96F46 866 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 DDX49Q9Y6V7 483 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 AATKQ6ZMQ8 1374 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 NEO1Q92859 1461 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 RIMBP3CA6NJZ7 1639 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 RIMBP3BA6NNM3 1639 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 RIMBP3Q9UFD9 1639 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 RIMS2Q9UQ26 1411 aa5.74□□□□□ -1.49
SMARCC1-206ENST00000485737 PREX1Q8TCU6 1659 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 FIGNL2A6NMB9 653 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 SOCS7O14512 581 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 VAMP4O75379 141 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 MBD3O95983 291 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 GNAI1P63096 354 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 LMOD3Q0VAK6 560 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 ANKRD45Q5TZF3 282 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 INTS3Q68E01 1043 aaKnown RBP5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 Q6ZVU0 165 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 PLEKHM2Q8IWE5 1019 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 USP26Q9BXU7 913 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 DCTPP1Q9H773 170 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 CYLDQ9NQC7 956 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 ZKSCAN5Q9Y2L8 839 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 SETD1AO15047 1707 aaKnown RBP5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 SSH2Q76I76 1423 aa5.73□□□□□ -1.49
SMARCC1-206ENST00000485737 TUBGCP6Q96RT7 1819 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 KIAA0232Q92628 1395 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 MON2Q7Z3U7 1717 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 TTLL8A6PVC2 850 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 DYNC1I1O14576 645 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 GPR37L1O60883 481 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 PRKAR2BP31323 418 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 ABL2P42684 1182 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 LRSAM1Q6UWE0 723 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 HDGFL2Q7Z4V5 671 aaPredicted RBP5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 ANKRD44Q8N8A2 993 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 RBSNQ9H1K0 784 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 GGNBP2Q9H3C7 697 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 ZNF395Q9H8N7 513 aaPredicted RBP5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 POLMQ9NP87 494 aaPredicted RBP5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 CCDC39Q9UFE4 941 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 ALKQ9UM73 1620 aa5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 EDC4Q6P2E9 1401 aaKnown RBP5.72□□□□□ -1.49
SMARCC1-206ENST00000485737 N4BP2Q86UW6 1770 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 MCM2P49736 904 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 MCTP1Q6DN14 999 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 CAVIN1Q6NZI2 390 aaKnown RBP5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 CASC1Q6TDU7 716 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 SASS6Q6UVJ0 657 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 RPAP2Q8IXW5 612 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 SEPT12Q8IYM1 358 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 GPT2Q8TD30 523 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 ZNF592Q92610 1267 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 INSM2Q96T92 566 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 OSBPL3Q9H4L5 887 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 ESF1Q9H501 851 aaKnown RBP5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 GDPD2Q9HCC8 539 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 SLC52A1Q9NWF4 448 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 DNMT3LQ9UJW3 386 aa5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 SOS2Q07890 1332 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-206ENST00000485737 RTL1A6NKG5 1358 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 ARHGEF10O15013 1369 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 C3P01024 1663 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 UQCRHLA0A096LP55 91 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 EPB41L2O43491 1005 aaKnown RBP5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 REC8O95072 547 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 BRD1O95696 1058 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 ADH1AP07327 375 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 UQCRHP07919 91 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 IL13P35225 146 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 MCCD1P59942 119 aaPredicted RBP5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 SRPK2P78362 688 aaKnown RBP5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 CUL4AQ13619 759 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 TWISTNBQ3B726 338 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms