RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 B4GALNT3Q6L9W6 998 aa19.64■□□□□ 0.73
APOE-205ENST00000485628 SP8Q8IXZ3 490 aa19.64■□□□□ 0.73
APOE-205ENST00000485628 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
APOE-205ENST00000485628 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
APOE-205ENST00000485628 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
APOE-205ENST00000485628 NLGN2Q8NFZ4 835 aa19.63■□□□□ 0.73
APOE-205ENST00000485628 SYT17Q9BSW7 474 aa19.63■□□□□ 0.73
APOE-205ENST00000485628 ATP6V0A2Q9Y487 856 aa19.63■□□□□ 0.73
APOE-205ENST00000485628 CACNA1SQ13698 1873 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 MROH5Q6ZUA9 1318 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 G3BP1Q13283 466 aaKnown RBP eCLIP19.62■□□□□ 0.73
APOE-205ENST00000485628 PRPF40BQ6NWY9 871 aaKnown RBP19.62■□□□□ 0.73
APOE-205ENST00000485628 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 TTLL6Q8N841 843 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 RHPN1Q8TCX5 695 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 ZNF622Q969S3 477 aaKnown RBP eCLIP19.62■□□□□ 0.73
APOE-205ENST00000485628 MPHOSPH8Q99549 860 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 SIL1Q9H173 461 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 PIM2Q9P1W9 311 aa19.62■□□□□ 0.73
APOE-205ENST00000485628 CHRNDQ07001 517 aa19.61■□□□□ 0.73
APOE-205ENST00000485628 TAF7LQ5H9L4 462 aa19.61■□□□□ 0.73
APOE-205ENST00000485628 GPR108Q9NPR9 543 aa19.61■□□□□ 0.73
APOE-205ENST00000485628 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
APOE-205ENST00000485628 PPEF1O14829 653 aaPredicted RBP19.6■□□□□ 0.73
APOE-205ENST00000485628 FGFR2P21802 821 aa19.6■□□□□ 0.73
APOE-205ENST00000485628 NUCB1Q02818 461 aa19.6■□□□□ 0.73
APOE-205ENST00000485628 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
APOE-205ENST00000485628 KIF1BPQ96EK5 621 aa19.6■□□□□ 0.73
APOE-205ENST00000485628 IRS2Q9Y4H2 1338 aa19.59■□□□□ 0.73
APOE-205ENST00000485628 PDE8BO95263 885 aa19.59■□□□□ 0.73
APOE-205ENST00000485628 CNNM1Q9NRU3 951 aa19.59■□□□□ 0.73
APOE-205ENST00000485628 ARFGEF1Q9Y6D6 1849 aa19.59■□□□□ 0.73
APOE-205ENST00000485628 DUOX1Q9NRD9 1551 aa19.58■□□□□ 0.73
APOE-205ENST00000485628 TFCP2Q12800 502 aa19.58■□□□□ 0.72
APOE-205ENST00000485628 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.72
APOE-205ENST00000485628 CC2D2BQ6DHV5 1058 aa19.57■□□□□ 0.72
APOE-205ENST00000485628 CEP126Q9P2H0 1117 aa19.57■□□□□ 0.72
APOE-205ENST00000485628 PPP1R1BQ9UD71 204 aaPredicted RBP19.57■□□□□ 0.72
APOE-205ENST00000485628 GOLGB1Q14789 3259 aaKnown RBP19.57■□□□□ 0.72
APOE-205ENST00000485628 SALL3Q9BXA9 1300 aa19.56■□□□□ 0.72
APOE-205ENST00000485628 WTIPA6NIX2 430 aaPredicted RBP19.56■□□□□ 0.72
APOE-205ENST00000485628 GPSM2P81274 684 aa19.56■□□□□ 0.72
APOE-205ENST00000485628 OLFM4Q6UX06 510 aa19.56■□□□□ 0.72
APOE-205ENST00000485628 EAF2Q96CJ1 260 aaPredicted RBP19.56■□□□□ 0.72
APOE-205ENST00000485628 RTFDC1Q9BY42 306 aaPredicted RBP19.56■□□□□ 0.72
APOE-205ENST00000485628 ANKRD2Q9GZV1 360 aa19.56■□□□□ 0.72
APOE-205ENST00000485628 ZBTB22O15209 634 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 UBE4AQ14139 1066 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 FER1L6Q2WGJ9 1857 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 TNNI3KQ59H18 835 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 DALRD3Q5D0E6 543 aaKnown RBP19.55■□□□□ 0.72
APOE-205ENST00000485628 METTL24Q5JXM2 366 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 C15orf52Q6ZUT6 534 aaKnown RBP19.55■□□□□ 0.72
APOE-205ENST00000485628 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 HELBQ8NG08 1087 aaPredicted RBP19.55■□□□□ 0.72
APOE-205ENST00000485628 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 FPGT-TNNI3KV9GXZ4 949 aa19.55■□□□□ 0.72
APOE-205ENST00000485628 XDHP47989 1333 aa19.54■□□□□ 0.72
APOE-205ENST00000485628 ZNF609O15014 1411 aa19.54■□□□□ 0.72
APOE-205ENST00000485628 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
APOE-205ENST00000485628 TAF5LO75529 589 aa19.54■□□□□ 0.72
APOE-205ENST00000485628 LEMD3Q9Y2U8 911 aa19.54■□□□□ 0.72
APOE-205ENST00000485628 SNAP23O00161 211 aa19.53■□□□□ 0.72
APOE-205ENST00000485628 OS9Q13438 667 aaPredicted RBP19.53■□□□□ 0.72
APOE-205ENST00000485628 IL1RAPL2Q9NP60 686 aa19.53■□□□□ 0.72
APOE-205ENST00000485628 POLLQ9UGP5 575 aa19.53■□□□□ 0.72
APOE-205ENST00000485628 AKAP2Q9Y2D5 859 aa19.53■□□□□ 0.72
APOE-205ENST00000485628 C21orf2O43822 256 aa19.52■□□□□ 0.72
APOE-205ENST00000485628 ATP2B4P23634 1241 aa19.52■□□□□ 0.72
APOE-205ENST00000485628 TIMM10P62072 90 aa19.52■□□□□ 0.72
APOE-205ENST00000485628 PUM3Q15397 648 aaKnown RBP19.52■□□□□ 0.72
APOE-205ENST00000485628 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
APOE-205ENST00000485628 TBC1D16Q8TBP0 767 aa19.52■□□□□ 0.72
APOE-205ENST00000485628 LPIN2Q92539 896 aa19.52■□□□□ 0.72
APOE-205ENST00000485628 A0A1B0GUL7 405 aa19.51■□□□□ 0.71
APOE-205ENST00000485628 PDE4AP27815 886 aa19.51■□□□□ 0.71
APOE-205ENST00000485628 SOGA3Q5TF21 947 aa19.51■□□□□ 0.71
APOE-205ENST00000485628 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
APOE-205ENST00000485628 CLASRPQ8N2M8 674 aaKnown RBP19.51■□□□□ 0.71
APOE-205ENST00000485628 MPNDQ8N594 471 aa19.51■□□□□ 0.71
APOE-205ENST00000485628 PSMD1Q99460 953 aa19.51■□□□□ 0.71
APOE-205ENST00000485628 ZNF804BA4D1E1 1349 aa19.51■□□□□ 0.71
APOE-205ENST00000485628 APBB1O00213 710 aa19.5■□□□□ 0.71
APOE-205ENST00000485628 ATP2B3Q16720 1220 aa19.5■□□□□ 0.71
APOE-205ENST00000485628 RTKN2Q8IZC4 609 aa19.5■□□□□ 0.71
APOE-205ENST00000485628 LNPKQ9C0E8 428 aa19.5■□□□□ 0.71
APOE-205ENST00000485628 DBNLQ9UJU6 430 aaKnown RBP19.5■□□□□ 0.71
APOE-205ENST00000485628 NSFL1CQ9UNZ2 370 aaKnown RBP19.5■□□□□ 0.71
APOE-205ENST00000485628 CCDC93Q567U6 631 aa19.49■□□□□ 0.71
APOE-205ENST00000485628 TXNRD3Q86VQ6 643 aa19.49■□□□□ 0.71
APOE-205ENST00000485628 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
APOE-205ENST00000485628 ANKIB1Q9P2G1 1089 aa19.49■□□□□ 0.71
APOE-205ENST00000485628 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
APOE-205ENST00000485628 GGA1Q9UJY5 639 aa19.49■□□□□ 0.71
APOE-205ENST00000485628 LTBP3Q9NS15 1303 aa19.49■□□□□ 0.71
APOE-205ENST00000485628 FBXO33Q7Z6M2 555 aa19.48■□□□□ 0.71
APOE-205ENST00000485628 OTUD7AQ8TE49 926 aaPredicted RBP19.48■□□□□ 0.71
APOE-205ENST00000485628 XAGE2Q96GT9 111 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms