RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 STYK1Q6J9G0 422 aa21.88■■□□□ 1.09
SMARCD3-212ENST00000485610 BSDC1Q9NW68 430 aaPredicted RBP21.88■■□□□ 1.09
SMARCD3-212ENST00000485610 RIPOR2Q9Y4F9 1068 aa21.88■■□□□ 1.09
SMARCD3-212ENST00000485610 MROH5Q6ZUA9 1318 aa21.88■■□□□ 1.09
SMARCD3-212ENST00000485610 LNPKQ9C0E8 428 aa21.87■■□□□ 1.09
SMARCD3-212ENST00000485610 SMARCA5O60264 1052 aaPredicted RBP21.86■■□□□ 1.09
SMARCD3-212ENST00000485610 METTL24Q5JXM2 366 aa21.86■■□□□ 1.09
SMARCD3-212ENST00000485610 IL1RAPL2Q9NP60 686 aa21.86■■□□□ 1.09
SMARCD3-212ENST00000485610 CEP126Q9P2H0 1117 aa21.86■■□□□ 1.09
SMARCD3-212ENST00000485610 ZNF609O15014 1411 aa21.86■■□□□ 1.09
SMARCD3-212ENST00000485610 CHRNA5P30532 468 aa21.85■■□□□ 1.09
SMARCD3-212ENST00000485610 ALDH1B1P30837 517 aa21.85■■□□□ 1.09
SMARCD3-212ENST00000485610 TFCP2Q12800 502 aa21.85■■□□□ 1.09
SMARCD3-212ENST00000485610 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
SMARCD3-212ENST00000485610 ZNF622Q969S3 477 aaKnown RBP eCLIP21.85■■□□□ 1.09
SMARCD3-212ENST00000485610 LTBP1Q14766 1721 aa21.84■■□□□ 1.09
SMARCD3-212ENST00000485610 BBOX1O75936 387 aa21.84■■□□□ 1.09
SMARCD3-212ENST00000485610 CLASRPQ8N2M8 674 aaKnown RBP21.84■■□□□ 1.09
SMARCD3-212ENST00000485610 CD2APQ9Y5K6 639 aa21.84■■□□□ 1.09
SMARCD3-212ENST00000485610 TGFB2P61812 414 aa21.83■■□□□ 1.09
SMARCD3-212ENST00000485610 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
SMARCD3-212ENST00000485610 GPR108Q9NPR9 543 aa21.83■■□□□ 1.09
SMARCD3-212ENST00000485610 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.08
SMARCD3-212ENST00000485610 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.08
SMARCD3-212ENST00000485610 CHRNDQ07001 517 aa21.82■■□□□ 1.08
SMARCD3-212ENST00000485610 TNNI3KQ59H18 835 aa21.82■■□□□ 1.08
SMARCD3-212ENST00000485610 MINPP1Q9UNW1 487 aa21.82■■□□□ 1.08
SMARCD3-212ENST00000485610 AKAP2Q9Y2D5 859 aa21.82■■□□□ 1.08
SMARCD3-212ENST00000485610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-212ENST00000485610 FPGT-TNNI3KV9GXZ4 949 aa21.82■■□□□ 1.08
SMARCD3-212ENST00000485610 PDE8BO95263 885 aa21.81■■□□□ 1.08
SMARCD3-212ENST00000485610 DPEP1P16444 411 aa21.81■■□□□ 1.08
SMARCD3-212ENST00000485610 KLHL34Q8N239 644 aa21.81■■□□□ 1.08
SMARCD3-212ENST00000485610 ANKRD2Q9GZV1 360 aa21.81■■□□□ 1.08
SMARCD3-212ENST00000485610 BCL11AQ9H165 835 aa21.81■■□□□ 1.08
SMARCD3-212ENST00000485610 PPP1R1BQ9UD71 204 aaPredicted RBP21.81■■□□□ 1.08
SMARCD3-212ENST00000485610 PDE4AP27815 886 aa21.8■■□□□ 1.08
SMARCD3-212ENST00000485610 AACSQ86V21 672 aa21.8■■□□□ 1.08
SMARCD3-212ENST00000485610 ARFGEF1Q9Y6D6 1849 aa21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 A0A0G2JLW4 131 aa21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 PUM3Q15397 648 aaKnown RBP21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 ATP2B3Q16720 1220 aa21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 PRPF40BQ6NWY9 871 aaKnown RBP21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 EAF2Q96CJ1 260 aaPredicted RBP21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 MYH13Q9UKX3 1938 aa21.79■■□□□ 1.08
SMARCD3-212ENST00000485610 IFIT2P09913 472 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-212ENST00000485610 SKAP1Q86WV1 359 aa21.78■■□□□ 1.08
SMARCD3-212ENST00000485610 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
SMARCD3-212ENST00000485610 ATP6V0A2Q9Y487 856 aa21.78■■□□□ 1.08
SMARCD3-212ENST00000485610 AK9Q5TCS8 1911 aa21.78■■□□□ 1.08
SMARCD3-212ENST00000485610 KCNA3P22001 575 aa21.77■■□□□ 1.08
SMARCD3-212ENST00000485610 SP8Q8IXZ3 490 aa21.77■■□□□ 1.08
SMARCD3-212ENST00000485610 XDHP47989 1333 aa21.77■■□□□ 1.08
SMARCD3-212ENST00000485610 SALL3Q9BXA9 1300 aa21.77■■□□□ 1.08
SMARCD3-212ENST00000485610 A0A1B0GUL7 405 aa21.77■■□□□ 1.07
SMARCD3-212ENST00000485610 TAF5LO75529 589 aa21.77■■□□□ 1.07
SMARCD3-212ENST00000485610 RGS3P49796 1198 aa21.77■■□□□ 1.07
SMARCD3-212ENST00000485610 C16orf71Q8IYS4 520 aaPredicted RBP21.77■■□□□ 1.07
SMARCD3-212ENST00000485610 TTLL6Q8N841 843 aa21.77■■□□□ 1.07
SMARCD3-212ENST00000485610 OTUD7AQ8TE49 926 aaPredicted RBP21.77■■□□□ 1.07
SMARCD3-212ENST00000485610 MX1P20591 662 aa21.76■■□□□ 1.07
SMARCD3-212ENST00000485610 FGFR2P21802 821 aa21.76■■□□□ 1.07
SMARCD3-212ENST00000485610 LPIN2Q92539 896 aa21.76■■□□□ 1.07
SMARCD3-212ENST00000485610 TMX4Q9H1E5 349 aaPredicted RBP21.76■■□□□ 1.07
SMARCD3-212ENST00000485610 DUOX1Q9NRD9 1551 aa21.76■■□□□ 1.07
SMARCD3-212ENST00000485610 SLC5A1P13866 664 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 UBE4AQ14139 1066 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 SLC51AQ86UW1 340 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 PLEKHM2Q8IWE5 1019 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 GPATCH3Q96I76 525 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 CCDC8Q9H0W5 538 aaPredicted RBP21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 PIM2Q9P1W9 311 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 ANKIB1Q9P2G1 1089 aa21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 DBNLQ9UJU6 430 aaKnown RBP21.75■■□□□ 1.07
SMARCD3-212ENST00000485610 KCNJ4P48050 445 aa21.74■■□□□ 1.07
SMARCD3-212ENST00000485610 NEUROD6Q96NK8 337 aa21.74■■□□□ 1.07
SMARCD3-212ENST00000485610 DBNDD2Q9BQY9 259 aa21.74■■□□□ 1.07
SMARCD3-212ENST00000485610 TLR7Q9NYK1 1049 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-212ENST00000485610 AOX1Q06278 1338 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 IFIT1P09914 478 aaKnown RBP21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 TIMM10P62072 90 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 GPSM2P81274 684 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 PODXL2Q9NZ53 605 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 STAP2Q9UGK3 403 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 LEMD3Q9Y2U8 911 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 TTC41PQ6P2S7 1318 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 FER1L6Q2WGJ9 1857 aa21.73■■□□□ 1.07
SMARCD3-212ENST00000485610 PDE1AP54750 535 aa21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 CC2D2BQ6DHV5 1058 aa21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 FHDC1Q9C0D6 1143 aaPredicted RBP21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 NSFL1CQ9UNZ2 370 aaKnown RBP21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 AKAP11Q9UKA4 1901 aa21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 ZNF804BA4D1E1 1349 aa21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 SNED1Q8TER0 1413 aa21.72■■□□□ 1.07
SMARCD3-212ENST00000485610 ATP2B4P23634 1241 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 NLGN2Q8NFZ4 835 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 C7orf43Q8WVR3 580 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 XAGE2Q96GT9 111 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 OSBPL3Q9H4L5 887 aa21.71■■□□□ 1.07
SMARCD3-212ENST00000485610 GGA1Q9UJY5 639 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms